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I have a strong interest in applied research, using information to improve policy. I have a broad interest in applying population genetics to the management of wild populations, particularly through a better understanding of dispersal.

Dr. Tatiana Proboste is a Research Fellow at the Spatial Epidemiology Lab (UQ), specialising in zoonotic disease transmission and spatiotemporal analysis. Her work utilises spatial models and network analysis techniques to enhance our understanding of disease transmission dynamics, particularly within wildlife populations and at the wildlife-human interface.

As a veterinarian with a robust background in terrestrial ecology and biodiversity management, Dr. Proboste brings a unique perspective to her research. She holds a Master’s degree from the Universitat Autonoma de Barcelona, where she focused on wildlife disease ecology and molecular tools. Her academic pursuits led her to earn a PhD from the University of Queensland in 2020, with her doctoral research centring on the use of genetic analysis tools to study wildlife’s role in disease transmission in modified environments.

Dr. Proboste’s contributions to research are extensive and varied. She has been involved in projects ranging from the molecular detection of tick-borne pathogens to the development of tools for exploring wildlife’s role in disease transmission. Recent years have seen her focus on investigating mosquito-borne disease outbreaks, identifying Q fever clusters in Queensland and associated risk factors, and applying network analysis to estimate contact rates in feral pig populations in eastern Australia. In addition to her research, Dr. Proboste is a casual lecturer at the School of Veterinary Science. She is also part of the Centre for Biodiversity and Conservation Science, Q fever Interest Group and the HEAL Network

Ecological and evolutionary genomics

My research group uses genetic markers as tools for understanding dispersal and gene flow, often with conservation implications and most frequently focusing on highly dispersive marine animals such as fishes, mussels, and corals. We also study how gene flow and natural selection affect genomic variation and limit gene exchange across genomes, populations, and species.

Dr Jodi Saunus is a senior fellow who specialises in translational research on metastatic breast cancer. Based at Brisbane’s Translational Research Institute, she was recruited by Mater Research in 2022 to help facilitate patient-focused research at the interface of biomedical R&D and clinical practice.

Dr Saunus has an honours degree in biochemistry and biomedical science, a PhD in breast cancer molecular genetics, and broad post-doctoral experience in immunology, molecular cell biology, pathology informatics, and early-phase investigator-initiated clinical trials. Her current portfolio focuses finding new ways to improve the clinical management of aggressive breast cancer, with a focus on triple-negative breast cancer, and the prevention and treatment of brain metastases. This work spans across multiple disciplines and capabilities, and broadly involves:

• Molecular profiling of patient-donated blood and tumour tissue samples to identify features that can predict treatment response, or represent previously uncharacterised therapeutic targets.
• Using experimental models of breast cancer metastasis to learn about the molecular mechanisms exploited by cancer cells to survive and grow in brain tissue.
• Developing innovative treatment strategies that work differently to conventional cancer drugs, including alpha-particle endoradiotherapy and in-situ vaccination.

With an outstanding network of collaborators from academia and clinical practice, she has secured more than $6M to fund this work and has a track record of publishing in prominent biomedical research journals (e.g., Cancer Research, Nature, Science Translational Medicine, Nature Communications and The Journal of Pathology).

Peripherally, Jodi is a strong proponent of biospecimen banking, and clinician and consumer engagement in translational research.

Professor Kate Schroder heads the Inflammasome Laboratory and is Director of the Centre for Inflammation and Disease Research at the Institute for Molecular Bioscience (IMB), University of Queensland, as an NHMRC Leadership Fellow. Kate’s graduate studies defined novel macrophage activation mechanisms and her subsequent postdoctoral research identified surprising inter-species divergence in the inflammatory programs of human versus mouse macrophages. As an NHMRC CJ Martin Fellow in Switzerland, Kate trained with the pioneer of inflammasome biology, Jürg Tschopp. The IMB Inflammasome Laboratory, which Kate heads, investigates the molecular mechanisms governing inflammasome activity and caspase activation, the cellular mediators of inflammasome-dependent inflammation, and mechanisms of inflammasome inhibition by cellular pathways and small molecule inhibitors.

Kate is a co-inventor on patents for small molecule inhibitors of the NLRP3 inflammasome, currently under commercialisation by Inflazome Ltd. Inflazome Ltd was recently acquired by Roche in a landmark deal – one of the largest in Australian and Irish biotech history. The acquisition gives Roche full rights to Inflazome’s portfolio of inflammasome inhibitors. Two of the company’s drug candidates are in clinical trials for the treatment of debilitating conditions such as cardiovascular disease, arthritis and neurodegenerative diseases such as Parkinson’s, Alzheimer’s and motor neuron disease.

Kate has authored more than 140 publications, featuring in journals such as Science, Cell, Nature Genetics, Nature Medicine, Nature Chemical Biology, Journal of Experimental Medicine and PNAS USA, and her work has been cited more than 35,000 times. Kate is an Editorial Board Member for international journals including Science Signaling, Clinical and Translational Immunology and Cell Death Disease. She is the recipient of the 2022 Women in Technology Excellence in Science Award, 2020 Nancy Mills Award for Women in Science, 2019 ANZSCDB Emerging Leader Award, 2019 Merck Research Medal, 2014 Milstein Young Investigator Award, 2013 Tall Poppy Award, 2012 Gordon Ada Career Award, 2010 QLD Premier’s Postdoctoral Award, and the 2008 Society for Leukocyte Biology’s Dolph Adams Award.

INFLAMMASOME LABORATORY RESEARCH

During injury or infection, our body’s immune system protects us by launching inflammation. But uncontrolled inflammation drives diseases such as gout, diabetes, neurodegenerative disease and cancer. The Inflammasome Lab is defining the molecular and cellular processes of inflammation. We seek to unravel the secrets of inflammasomes – protein complexes at the heart of inflammation and disease – to allow for new therapies to fight human diseases.

The Inflammasome Laboratory integrates molecular and cell biology approaches with in vivo studies to gain a holistic understanding of inflammasome function during infection, and inflammasome dysfunction in human inflammatory disease. Current research interests include the molecular mechanisms governing inflammasome activity and caspase activation, the cellular mediators of inflammasome-dependent inflammation, and inflammasome suppression by autophagy and small molecule inhibitors.

My group's research uses large-scale genomic data to address knowledge gaps in disease, with a particular focus on cardiovascular disease.

Research programme

1. Cardiovascular disease research using big-data and genomics: with the goal of improving prevention and treatment of cardiovascular disease. By focusing on underrepresented groups, including women, my research aims to also address inequity in cardiovascular outcomes. I am the lead of the South Asian Genes and Health in Australia (SAGHA) study, which aims to increase representation of Australian South Asians in cardiovascular and genomics research. See saghaus.org for further details.

2. Drug genomics: I'm interested in using genomic approaches to predict drug effects, including identification of drug repurposing opportunities as well as identifying unknown adverse effects of medication.

3. Liver transplant research: In this collaboration with the QLD Liver Transplant Unit, we are using genomics to understand the effect of normo-thermic perfusion (a new organ storage method) on liver function, with the long-term goal of improving our ability to predict transplant outcomes.

Career summary: I was awarded my PhD from University College London (UK) in cardiovascular genetics. I began my post-doctoral fellowship under the mentorship of Prof Peter Visscher at the Queensland Brain Institute in 2013. Between 2016-2018, I was the lead analyst for the International Heart Failure Genetics Consortium (HERMES). In 2018, I was awarded an NHMRC Early Career Researcher Fellowship to investigate the relationship between cardiovascular and brain-related disorders using large-scale genetic and genomic data, under the mentorship of Prof Naomi Wray. I currently hold a National Heart Foundation Future Leader Fellowship.

Recognition:

2024 Australian Academy of Science Ruth Stephens Gani Medal for outstanding contribution to genetics research

2023 1 of 5 global finalists for the Nature Inspiring Women in Science (Scientific Achievement Award)

2023 Lifesciences QLD Rose-Anne Kelso Award

2023: Named in Australia's Top 25 Women in Science by Newscorp

2022 Queensland Young Tall Poppy Award

2022 UQ Foundation Research Excellence Award

2021/2022 Australian Superstar of STEM,

2020 Genetic Society of Australasia Early Career Award

2020 Women in Technology Rising Star Science Award

Dr Shapter's background was originally in Agricultural Science and higher education which evolved to the completion of her PhD in molecular genetics in 2008. Prior to her current appointments she was the senior researcher on ARC linkage, Australian Flora Foundation and RIRDC research grants looking at the genetic foundations of domestication and adaptation in Australian native grasses. She supervised two HDR students and has a strong publication record in this field. Her research interests centre on identifying and developing practical applications for gene sequencing. Fran is passionate about teaching and has worked as a facilitator commercially and trained early career researchers and PhD candidates in Project Management, IP and commercialisation and Leadership. She was a participant in the 2020 summit and was appointed to the federal advisory Rural R&D Council in 2009. Dr Shapter was also a sitting member of the Office of the Gene Technology Regulator's Ethics and Community Consultative Committee, 2016-2020.

Fran began tutoring at the UQ School of Veterinary Science in 2011, in large animal production, parasitology and microbiology. Since then she has held a variety of teaching, research and professional roles based around project management, curriculum design and blended learning design. She was the project manager for a Scholarship of Teaching and Learning (SoTL) grant which developed 40 vertically and horizontally integrated, online, adaptive tutorials for veterinary science students and was co-author on the manual developed by this project. She assisted with the development of a new flexible delivery laboratory animal science course in 2015 and delivers 5 weeks of online learning units into this course currently. She has been part of the SoTL research and evaluation associated with both these projects and has reported outcomes at University showcases annually since 2016.

In 2017 Fran became the new Student Clinical Skills Hub Coordinator, a purpose-built, state-of-the-art self-directed learning facility for students of veterinary science. Whilst undertaking this role student usage, resource availability and online support for the Hub has increased more than tenfold. Fran's aim is to provide a safe, authentic, self-directed learning environment where students can practice their clinical skills in accordance with individual competences, beyond the scheduled contact hours of their programs and further enhance their capacity for self-directed, lifelong learning whilst acknowledging the vast array of qualifications, previous training, life experience and cultural backgrounds each student brings with them to the Hub.In 2020 Fran recieved a UQ Teaching Excellence Award due to the demonstarted impact of the SVS Student Clinical Skills Hub.

In 2019 Fran was appointed as a Lecturer in Veterinary Science, while continuing her role as the Hub's coordinator. She continues to maintain her teaching roles into the veterinary program in animal handling, animal production, reproduction, microbiology, parasitology and plant identification. Fran has an additional role in the School with regard to asissting with the design, development and integration of blended learning resources, after working with the Science faculties blended learning design team in 2018. However her SoTL portfolio is best showcased by the development of the online learning community and training resources she has developed for the Student Clinical Skills Hub. As of June 2021, Fran has also taken on the role of the School of Veterinary Science Honours Program Coordinator.

PLEASE NOTE THAT ANY AUTHORSHIP ALTERATIONS LISTING ME AS SIMPSON-FRASER BELOW ARE INCORRECT. ALL PUBLICATIONS ARE FIONA SIMPSON. MY PROFESSIONAL NAME IS FIONA SIMPSON.

https://www.abc.net.au/radionational/programs/ockhamsrazor/the-tricky-business-of-cancer-research/9498246

Our laboratory is involved in cross-discipline research studying endocytosis, cancer, pharmacology and immunology to improve therapies used in cancer treatment.

RESEARCH INTERESTS Fire Ecology, Restoration Ecology, Ecological Genomics, Wildlife Science, Conservation Biology, Invasive Plants

My research group studies fire ecology and conservation biology. Currently, we are working on:

• Using fire to benefit plant biodiversity and manage invasive plants
• Predicting effects of changing fire regimes on plant-animal interactions
• Native grassland restoration
• Biodiversity in agricultural landscapes

We have a special interest in plants and animals living in fire-prone areas because of the fascinating fact that these ecosystems are never static but continually re-shaped by cycles of fire and regeneration. While being grounded in fundamental biology and ecological theory, our research is always aimed at improving knowledge for biodiversity conservation. Our work has applications in fire management, biological invasion and threatened species conservation.

TECHNICAL APPROACHES: POPULATION GENETICS | SPATIAL LANDSCAPE GENETICS | DEMOGRAPHIC SIMULATION MODELLING | STATISTICAL MODELLING OF POPULATIONS & COMMUNITIES | BIOINFORMATICS | SPATIAL ANALYSIS IN R | We also know how to drop a hand-made 1 x 1 m polypipe quadrat on the ground and do good old-fashioned field work.

TEACHING: I teach ecology, wildlife science and environmental science at UQ. My teaching and coordination activities have included Elements of Ecology (AGRC1032), Wildlife Technology (ANIM3018) and People Fire & Environment (ENVM3215 / ENMV7530).

EDITORIAL I am Associate Editor for Wildlife Letters (2023–)

I was Associate Editor for Journal of Applied Ecology for four years (2018–2022).

CURRICULUM VITAE

• 2019 – current Lecturer, University of Queensland
• 2018 – 2022 Associate Editor, Journal of Applied Ecology
• 2018 – 2019 Marie Skłodowska-Curie Research Fellow, Trinity College Dublin
• 2016 – 2017 Post-doctoral Research Fellow, Trinity College Dublin
• 2015 – 2016 Post-doctoral Research Assistant, University of Melbourne
• 2015 – 2016 Self-employed Consultant Ecologist, Canberra
• 2012 – 2014 Post-doctoral Research Fellow, Australian National University

EDUCATION

2012 PhD in Ecology, Australian National University

2006 BSc in Biodiversity Conservation Honours, Flinders University

2005 BSc in Biodiversity Conservation, Flinders University

Associate Professor Mitchell Stark is a molecular biologist and Group Leader (Principal Research Fellow) from the Dermatology Research Centre (DRC) based at the Frazer Institute, The University of Queensland (UQ; Brisbane, Australia). He leads the pre-melanoma genomics program at the Frazer Institute and his group has extensive experience in the use of next-generation sequencing, spatial transcriptomics, bioinformatics, and functional analysis for a variety of applications. The Stark Lab’s major research streams include: miRNA biomarkers for melanoma progression and the development a Genomics Atlas of pre-skin cancer lesions, which aim to provide to greater understand melanoma progression from naevi and early invasive melanoma, with a goal to discover novel predictive biomarkers that offer increased precision to the clinical management of patients.

He has been engaged in melanoma and nevus research for 25+ years (with 9-years post PhD) and over this time he has been working towards understanding the aetiology of melanoma, studying gene dysregulation during tumor progression along with predisposition to melanoma in families with high risk for melanoma development. Dr Stark has a total of 97 career publications including 1 book chapter, 83 journal articles, 12 reviews/perspectives and 1 patent (WO/2016/029260) which have been cited a total of 7,053/10,208 times (Scopus/Google; h-index: 38/42) and has published in respected journals such as Nature, Nature Genetics, Cancer Research, and Journal of Investigative Dermatology. He has been awarded a career total of ~$10M as an Investigator (PI/co-PI/co-Investigator) including a prestigious NHMRC Peter Doherty Early Career Research Fellowship (2016-2019) and a recent NHMRC Investigator award (2025-2029), along with several research grants as Principal Investigator (e.g., Advance QLD Innovation Partnership, Department of Defence CDMRP – Melanoma Research Program).

Critical Care Medicine focuses on supporting patients, often with one or multiple organ failures. Based at the largest Australian cardiac hospital, our research investigates better ways to support patients with heart and/or lung failure. We explore technological, pharmacological and engineering advances that could help our patients to live longer and better. Our group is world-renowned for clinically relevant large animal models, including heart failure, respiratory failure (ARDS), heart transplantation, sepsis, cardiogenic shock, and more. All our studies use hospital-grade equipment and follow the same clinical guideline to maximise translation. We actively take on honours, MPhil and PhD students from multi-disciplinary backgrounds (science, engineering, medicine, allied health), with a successful track record in supporting our students to secure their own grants and funding. Students are expected to contribute to other studies of the group. For more information about the group, please visit ccrg.org.au, and email if you are interested to join us.

My research interests are at the intersection of plant developmental genetics, functional genomics, and molecular and systems biology, following my doctoral and postdoctoral training in the USA. The research effort in my group is focused on harnessing transformative genomics technology to understand the genetics of plant development, and to discover regulatory mechanisms coordinating plant growth and development. We utilize a variety of plant species in our research, from the model plant organism Arabidopsis to grain and horticultural crops like wheat, mango, avocado and macadamia. We employ a range of techniques based on high throughout DNA sequencing to explore gene expression, chromatin accessibility and modifications from single cell to whole plant levels, bioinformatics and computational biology tools to infer genetic components of gene regulatory networks, as well as gene editing technology to evaluate phenotipic consequences of perturbations in gene regulatory networks.

Dr. Kelvin Tuong is a Senior Research Fellow/Group Leader at the Ian Frazer Centre for Children’s Immunotherapy Research (IFCCIR), Child Health Research Centre. He is interested in single-cell analysis of immune cells and harnessing adaptive immune receptors for understanding immune cell development and function in health and in cancer.

Dr. Tuong was born and raised in Singapore and moved to Brisbane, Australia, after completing national service in Singapore and obtaining a Diploma in Biomedical Laboratory Technology (Ngee Ann Polytechnic).

Dr. Tuong was originally trained as a molecular cell biologist and gradually transitioned into bioinformatics during his post-doctoral training. He has been very prolific for an early career researcher, having published >50 articles since 2013, with nearly a third of them as first/co-first or last author and has a stellar track record of pushing out highly collaborative work in prestigious journals including Nature, Cell, Science, Nature Medicine, Nature Biotechnology J Exp Med etc. He has the rare combination of having excellent laboratory and bioinformatics skill sets which provide him a strong command of both fundamental immunology and computational approaches.

Dr. Tuong completed his undergraduate Bachelor's degree in Biomedical science with Class I Honours, followed by his PhD in macrophage cell biology and endocrinology at UQ (Prof. Jenny Stow lab and Emiritus Prof. George Muscat lab, IMB, UQ). He then went on to a post-doc position with Emiritus Prof. Ian Frazer (co-inventor of the Gardasil cervical cancer vaccine, UQ Frazer Institute, Translational Research Institute) where he worked on HPV immunology, cervical cancer and skin cancer. In his time in the Frazer lab, he developed an interest in bioinformatics analyses as a means to tackle and understanding immunology problems in health and disease. He then moved to the UK and joined Prof. Menna Clatworthy's lab at the University of Cambridge and Dr. Sarah Teichmann's lab at the Wellcome Trust Sanger Institute. He has focused his interests on single-cell analyses of tissue immune cells, including T and B cells and their specific receptors (TCR/BCR). He has developed bespoke bioinformatics software, including one tailored for single-cell B Cell Receptor sequencing analysis, Dandelion, which he used in one of the largest combined single-cell transcriptomic, surface proteomic and TCR/BCR sequencing dataset in the world, published in Nature Medicine, and more recently in Nature Biotechnology where we introduced a TCR-based pseudotime trajectory analysis method.

Dr. Tuong is now leading the Computational Immunology group at the IFCCIR and his lab is focused on investigating how pediatric immunity is perturbed during cancer at the cellular level and how this information can be used for creating novel warning systems for children with cancer. For potential students/post-docs/trainees interested in joining the team, please contact Dr. Tuong at z.tuong@uq.edu.au.

Professor Bruno van Swinderen received his PhD in Evolutionary and Population Biology in 1998 from Washington University in St. Louis, Missouri. His graduate work was on general anesthesia in a Caenorhabditis elegans model, applying both quantitative genetics and molecular genetic approaches. For his postdoc at The Neurosciences Institute (NSI) in San Diego, California (1999-2003), he switched to Drosophila melanogaster to develop methods of studying perception in the fruit-fly model. He ran a lab at NSI from 2003 to late 2007.

Professor van Swinderen established a new laboratory at the Queensland Brain Institute in February 2008.

Bruno van Swinderen's group use Drosophila as a genetic model system to study mechanisms of perception in the brain and are interested in three phenomena: selective attention, sleep, and general anesthesia. Their focus is on visual perception and how it is affected by these different arousal states. Their current effort is in understanding how sleep regulates selective attention and predictive processing. Toward this goal, they use various novel visual paradigms in a Drosophila molecular genetics context. The lab is also focussed on understanding presynaptic mechamisms of general anaesthesia, with a view to uncovering new strategies to improve recovery from this common medical procedure.

Visscher joined the University of Queensland in 2011, where he is Professor of Quantitative Genetics. He is a Laureate Fellow of the Australian Research Council. Visscher was elected a Fellow of the Australian Academy of Science in 2010, a Fellow of the Royal Society (London) in 2018 and a Foreign Member of the Royal Netherlands Academy of Arts and Sciences in 2018.

Visscher’s research is about genetic variation for complex traits (including quantitative traits and disease) in populations, with the broad aim to understand and quantify the causes and consequences of human trait variation.

Prof Peter Visscher, Prof Naomi Wray and Prof Jian Yang together comprise the Executive Team of the Program in Complex Trait Genomics (PCTG). PCTG comprises a critical mass of more than 30 post-doctoral researchers plus research assistants and students, all supported by external grant funding. Their skills lie in the ability to develop and apply statistical methods within the framework of quantitative, population and statistical genetics and to use theory to understand and predict results from data analyses. They play leading roles in the international research consortia. The focus of current research activities is in the detection and fine-mapping of loci underlying complex traits (including common disease), based upon theoretical studies and applications of methods to large datasets, in population genetics studies using theoretical approaches and high-density genetic marker data, and in systems genomics studies.

My research interests are centred around the structure and function of venom and silk polypeptides produced by arthropods, and their use in biotechnology and medicine. I am a Postdoctoral Fellow in the King laboratory in the Institute for Molecular Bioscience, the University of Queensland, Australia. Currently, I am investigating the composition, function and evolution of neglected insect venoms produced by assassin bugs (Hemiptera: Reduviidae), robber flies (Diptera: Asilidae) and nettle caterpillars (Lepidoptera: Limacodidae).

Dr Nicole Warrington is a NHMRC Emerging Leadership Fellow at the University of Queensland Institute for Molecular Bioscience. She has a strong background in statistical genetics and has been actively working towards understanding the genetic determinants of early life growth. Dr Warrington studied a Bachelor of Science at Victoria University in Wellington, New Zealand, majoring in Mathematical Statistics and Psychology. She then completed an honours degree at The University of Western Australia, where she developed a keen interest for genetics, and was subsequently awarded an Australian Postgraduate Award to complete her PhD in statistical genetics and life-course epidemiology. During her PhD she spent time at the University of Toronto to gain experience in statistical modelling methods for longitudinal growth trajectories and conducted the first genome-wide association study of longitudinal growth trajectories over childhood. After completing her PhD, Dr Warrington started at the University of Queensland and focused on using genetics to inform about the relationship between birth weight and cardio-metabolic diseases in later life. She pioneered a new statistical method to partition genetic effects on birth weight into maternal and fetal components, and combined this method with a causal modelling approach, Mendelian randomization. This method was instrumental in demonstrating the relationship between birth weight and adult hypertension is driven by genetic effects, over-turning 30 years of research into the effects of intrauterine programming. More recently, her research focus has broadened to determine whether rapid weight growth across early life, including fetal development, childhood and adolescence, causally increases risk of cardio-metabolic disease and in doing so, hopes to identify optimal times across the life-course where interventions could reduce the incidence of cardio-metabolic diseases.