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Dr Milos Tanurdzic
Dr

Milos Tanurdzic

Email: 
Phone: 
+61 7 336 52045

Overview

Background

My research interests are at the intersection of plant developmental genetics, functional genomics, and molecular and systems biology, following my doctoral and postdoctoral training in the USA. The research effort in my group is focused on harnessing transformative genomics technology to understand the genetics of plant development, and to discover regulatory mechanisms coordinating plant growth and development. We utilize a variety of plant species in our research, from the model plant organism Arabidopsis to grain and horticultural crops like wheat, mango, avocado and macadamia. We employ a range of techniques based on high throughout DNA sequencing to explore gene expression, chromatin accessibility and modifications from single cell to whole plant levels, bioinformatics and computational biology tools to infer genetic components of gene regulatory networks, as well as gene editing technology to evaluate phenotipic consequences of perturbations in gene regulatory networks.

Availability

Dr Milos Tanurdzic is:
Available for supervision
Media expert

Qualifications

  • Doctor of Philosophy, Purdue University

Research impacts

We continuosly work on translating our basic research findings and genome profiling technologies to improve and intensify crop production in collaborative research with government and industry partners.

Works

Search Professor Milos Tanurdzic’s works on UQ eSpace

47 works between 2001 and 2024

1 - 20 of 47 works

2024

Journal Article

Strigolactone induces <scp>D14</scp>‐dependent large‐scale changes in gene expression requiring <scp>SWI</scp>/<scp>SNF</scp> chromatin remodellers

Humphreys, Jazmine L., Beveridge, Christine A. and Tanurdžić, Miloš (2024). Strigolactone induces D14‐dependent large‐scale changes in gene expression requiring SWI/SNF chromatin remodellers. The Plant Journal, 119 (3), 1526-1542. doi: 10.1111/tpj.16873

Strigolactone induces <scp>D14</scp>‐dependent large‐scale changes in gene expression requiring <scp>SWI</scp>/<scp>SNF</scp> chromatin remodellers

2024

Journal Article

Advancing tree genomics to future proof next generation orchard production

Kerr, Stephanie C., Shehnaz, Saiyara, Paudel, Lucky, Manivannan, Mekaladevi S., Shaw, Lindsay M., Johnson, Amanda, Velasquez, Jose Teodoro J., Tanurdžić, Miloš, Cazzonelli, Christopher I., Varkonyi-Gasic, Erika and Prentis, Peter J. (2024). Advancing tree genomics to future proof next generation orchard production. Frontiers in Plant Science, 14 1321555, 1-23. doi: 10.3389/fpls.2023.1321555

Advancing tree genomics to future proof next generation orchard production

2023

Journal Article

Genome-wide identification of accessible chromatin regions by ATAC-seq upon induction of the transcription factor bZIP11 in Arabidopsis

Hellens, Alicia M., Humphreys, Jazmine L., Fichtner, Franziska, Tanurdžić, Miloš, Beveridge, Christine A. and Barbier, François F. (2023). Genome-wide identification of accessible chromatin regions by ATAC-seq upon induction of the transcription factor bZIP11 in Arabidopsis. Scientific Data, 10 (1) 490, 490. doi: 10.1038/s41597-023-02395-6

Genome-wide identification of accessible chromatin regions by ATAC-seq upon induction of the transcription factor bZIP11 in Arabidopsis

2022

Journal Article

Epigenome guided crop improvement: current progress and future opportunities

Zhang, Yan, Andrews, Haylie, Eglitis-Sexton, Judith, Godwin, Ian, Tanurdžić, Miloš and Crisp, Peter A. (2022). Epigenome guided crop improvement: current progress and future opportunities. Emerging Topics in Life Sciences, 6 (2), 141-151. doi: 10.1042/etls20210258

Epigenome guided crop improvement: current progress and future opportunities

2022

Journal Article

Horticultural innovation by viral-induced gene regulation of carotenogenesis

Paudel, Lucky, Kerr, Stephanie, Prentis, Peter, Tanurdžić, Miloš, Papanicolaou, Alexie, Plett, Jonathan M. and Cazzonelli, Christopher I. (2022). Horticultural innovation by viral-induced gene regulation of carotenogenesis. Horticulture Research, 9 uhab008, 1-19. doi: 10.1093/hr/uhab008

Horticultural innovation by viral-induced gene regulation of carotenogenesis

2021

Journal Article

Profiling the endosperm, one nucleus at a time

Tanurdžić, Miloš (2021). Profiling the endosperm, one nucleus at a time. Nature Plants, 7 (6), 710-711. doi: 10.1038/s41477-021-00945-7

Profiling the endosperm, one nucleus at a time

2021

Journal Article

Loss of small-RNA-directed DNA methylation in the plant cell cycle promotes germline reprogramming and somaclonal variation

Borges, Filipe, Donoghue, Mark T.A., LeBlanc, Chantal, Wear, Emily E., Tanurdžić, Milos, Berube, Benjamin, Brooks, Ashley, Thompson, William F., Hanley-Bowdoin, Linda and Martienssen, Robert A. (2021). Loss of small-RNA-directed DNA methylation in the plant cell cycle promotes germline reprogramming and somaclonal variation. Current Biology, 31 (3), 591-600.e4. doi: 10.1016/j.cub.2020.10.098

Loss of small-RNA-directed DNA methylation in the plant cell cycle promotes germline reprogramming and somaclonal variation

2020

Journal Article

An optimised chromatin immunoprecipitation (ChIP) method for starchy leaves of Nicotiana benthamiana to study histone modifications of an allotetraploid plant

Ranawaka, Buddhini, Tanurdzic, Milos, Waterhouse, Peter and Naim, Fatima (2020). An optimised chromatin immunoprecipitation (ChIP) method for starchy leaves of Nicotiana benthamiana to study histone modifications of an allotetraploid plant. Molecular Biology Reports, 47 (12), 9499-9509. doi: 10.1007/s11033-020-06013-1

An optimised chromatin immunoprecipitation (ChIP) method for starchy leaves of Nicotiana benthamiana to study histone modifications of an allotetraploid plant

2020

Journal Article

Pre‐introduction introgression contributes to parallel differentiation and contrasting hybridization outcomes between invasive and native marine mussels

Popovic, Iva, Bierne, Nicolas, Gaiti, Federico, Tanurdžić, Miloš and Riginos, Cynthia (2020). Pre‐introduction introgression contributes to parallel differentiation and contrasting hybridization outcomes between invasive and native marine mussels. Journal of Evolutionary Biology, 34 (1) jeb.13746, 175-192. doi: 10.1111/jeb.13746

Pre‐introduction introgression contributes to parallel differentiation and contrasting hybridization outcomes between invasive and native marine mussels

2020

Journal Article

De novo transcriptome assembly and annotation for gene discovery in avocado, macadamia and mango

Chabikwa, Tinashe G., Barbier, Francois F., Tanurdzic, Milos and Beveridge, Christine A. (2020). De novo transcriptome assembly and annotation for gene discovery in avocado, macadamia and mango. Scientific Data, 7 (1) 9, 9. doi: 10.1038/s41597-019-0350-9

De novo transcriptome assembly and annotation for gene discovery in avocado, macadamia and mango

2020

Journal Article

SDG8-mediated histone methylation and RNA processing function in the response to nitrate signaling

Li, Ying, Brooks, Matthew, Yeoh-Wang, Jenny, McCoy, Rachel M, Rock, Tara M, Pasquino, Angelo, Moon, Chang In, Patrick, Ryan M, Tanurdzic, Milos, Ruffel, Sandrine, Widhalm, Joshua R, McCombie, W Richard and Coruzzi, Gloria M (2020). SDG8-mediated histone methylation and RNA processing function in the response to nitrate signaling. Plant Physiology, 182 (1), 215-227. doi: 10.1104/pp.19.00682

SDG8-mediated histone methylation and RNA processing function in the response to nitrate signaling

2019

Journal Article

A phenol/chloroform-free method to extract nucleic acids from recalcitrant, woody tropical species for gene expression and sequencing

Barbier, François F., Chabikwa, Tinashe G., Ahsan, Muhammad U., Cook, Stacey E., Powell, Rosanna, Tanurdzic, Milos and Beveridge, Christine A. (2019). A phenol/chloroform-free method to extract nucleic acids from recalcitrant, woody tropical species for gene expression and sequencing. Plant Methods, 15 (1) 62, 62. doi: 10.1186/s13007-019-0447-3

A phenol/chloroform-free method to extract nucleic acids from recalcitrant, woody tropical species for gene expression and sequencing

2019

Journal Article

Juvenility and vegetative phase transition in tropical/subtropical tree crops

Ahsan, Muhammad Umair, Hayward, Alice, Irihimovitch, Vered, Fletcher, Stephen, Tanurdzic, Milos, Pocock, Alexander, Beveridge, Christine Anne and Mitter, Neena (2019). Juvenility and vegetative phase transition in tropical/subtropical tree crops. Frontiers in Plant Science, 10 729, 729. doi: 10.3389/fpls.2019.00729

Juvenility and vegetative phase transition in tropical/subtropical tree crops

2019

Journal Article

Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants

Medici, Anna, Szponarski, Wojciech, Dangeville, Pierre, Safi, Alaeddine, Dissanayake, Indeewari Madhubhashini, Saenchai, Chorpet, Emanuel, Amélie, Rubio, Vicente, Lacombe, Benoît, Ruffel, Sandrine, Tanurdzic, Milos, Rouached, Hatem and Krouk, Gabriel (2019). Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants. The Plant Cell, 31 (5), 1171-1184. doi: 10.1105/tpc.18.00656

Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants

2019

Book Chapter

De novo plant transcriptome assembly and annotation using illumina RNA-seq reads

Kerr, Stephanie C., Gaiti, Federico and Tanurdzic, Milos (2019). De novo plant transcriptome assembly and annotation using illumina RNA-seq reads. Plant long non-coding RNAs: methods and protocols. (pp. 265-275) edited by Julia A. Chekanova and Hsiao-Lin V. Wang. New York, NY, United States: Springer Nature. doi: 10.1007/978-1-4939-9045-0_16

De novo plant transcriptome assembly and annotation using illumina RNA-seq reads

2018

Journal Article

Sex determination in is accompanied by transcriptome changes that drive epigenetic reprogramming of the young gametophyte

Atallah, Nadia M., Vitek, Olga, Gaiti, Federico, Tanurdzic, Milos and Banks, Jo Ann (2018). Sex determination in is accompanied by transcriptome changes that drive epigenetic reprogramming of the young gametophyte. G3: Genes, Genomes, Genetics, 8 (7), 2205-2214. doi: 10.1534/g3.118.200292

Sex determination in is accompanied by transcriptome changes that drive epigenetic reprogramming of the young gametophyte

2018

Journal Article

Long non-coding regulatory RNAs in sponges and insights into the origin of animal multicellularity

Gaiti, Federico, Degnan, Bernard M and Tanurdžić, Miloš (2018). Long non-coding regulatory RNAs in sponges and insights into the origin of animal multicellularity. RNA Biology, 15 (6), 1-22. doi: 10.1080/15476286.2018.1460166

Long non-coding regulatory RNAs in sponges and insights into the origin of animal multicellularity

2018

Journal Article

Sponge Long Non-Coding RNAs Are Expressed in Specific Cell Types and Conserved Networks

Gaiti, Federico, Hatleberg, William L., Tanurdžić, Miloš and Degnan, Bernard M. (2018). Sponge Long Non-Coding RNAs Are Expressed in Specific Cell Types and Conserved Networks. Non-Coding RNA, 4 (1) 6, 6. doi: 10.3390/ncrna4010006

Sponge Long Non-Coding RNAs Are Expressed in Specific Cell Types and Conserved Networks

2017

Journal Article

Convergent microevolution of Cryptococcus neoformans hypervirulence in the laboratory and the clinic

Arras, Samantha D. M., Ormerod, Kate L., Erpf, Paige E., Espinosa, Monica I., Carpenter, Alex C., Blundell, Ross D., Stowasser, Samantha R., Schulz, Benjamin L., Tanurdzic, Milos and Fraser, James A. (2017). Convergent microevolution of Cryptococcus neoformans hypervirulence in the laboratory and the clinic. Scientific Reports, 7 (1) 17918, 1-14. doi: 10.1038/s41598-017-18106-2

Convergent microevolution of Cryptococcus neoformans hypervirulence in the laboratory and the clinic

2017

Journal Article

Origin and evolution of the metazoan non-coding regulatory genome

Gaiti, Federico, Calcino, Andrew D., Tanurdzic, Miloš and Degnan, Bernard M. (2017). Origin and evolution of the metazoan non-coding regulatory genome. Developmental Biology, 427 (2), 193-202. doi: 10.1016/j.ydbio.2016.11.013

Origin and evolution of the metazoan non-coding regulatory genome

Funding

Past funding

  • 2018 - 2023
    National Tree Genomic Program - Genotype Predictions (Hort Innovation grant administered by QUT)
    Queensland University of Technology
    Open grant
  • 2016 - 2017
    Non-coding RNA and gene regulatory mechanisms in wheat
    UQ Collaboration and Industry Engagement Fund - FirstLink
    Open grant
  • 2015
    Beyond genomes, transcriptomes and proteomes: high throughput analysis of gene and protein expression and function
    UQ Major Equipment and Infrastructure
    Open grant
  • 2015 - 2017
    The Role of Sugar Demand in Apical Dominance: Branching in a New Direction
    ARC Discovery Projects
    Open grant
  • 2013 - 2020
    Transforming subtropical/tropical tree crop productivity
    Queensland Department of Agriculture, Fisheries and Forestry
    Open grant
  • 2012
    Deciphering epigenetic regulatory mechanisms in wheat using high throughput DNA sequencing and epigenomics profiling
    UQ Early Career Researcher
    Open grant
  • 2012
    Plant Molecular Genetics and Genomics Facility.
    UQ Major Equipment and Infrastructure
    Open grant

Supervision

Availability

Dr Milos Tanurdzic is:
Available for supervision

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Supervision history

Current supervision

Completed supervision

Media

Enquiries

Contact Dr Milos Tanurdzic directly for media enquiries about:

  • genetics education
  • plant development
  • plant gene editing
  • plant genetics
  • plant science

Need help?

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communications@uq.edu.au