
Overview
Background
My research interests are at the intersection of plant developmental genetics, functional genomics, and molecular and systems biology, following my doctoral and postdoctoral training in the USA. The research effort in my group is focused on harnessing transformative genomics technology to understand the genetics of plant development, and to discover regulatory mechanisms coordinating plant growth and development. We utilize a variety of plant species in our research, from the model plant organism Arabidopsis to grain and horticultural crops like wheat, mango, avocado and macadamia. We employ a range of techniques based on high throughout DNA sequencing to explore gene expression, chromatin accessibility and modifications from single cell to whole plant levels, bioinformatics and computational biology tools to infer genetic components of gene regulatory networks, as well as gene editing technology to evaluate phenotipic consequences of perturbations in gene regulatory networks.
Availability
- Associate Professor Milos Tanurdžić is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, Purdue University
Research impacts
We continuosly work on translating our basic research findings and genome profiling technologies to improve and intensify crop production in collaborative research with government and industry partners.
Works
Search Professor Milos Tanurdžić’s works on UQ eSpace
2017
Journal Article
Sirtuins in the phylum Basidiomycota: A role in virulence in Cryptococcus neoformans
Arras, Samantha D. M., Chitty, Jessica L., Wizrah, Maha S. I., Erpf, Paige E., Schulz, Benjamin L., Tanurdzic, Milos and Fraser, James A. (2017). Sirtuins in the phylum Basidiomycota: A role in virulence in Cryptococcus neoformans. Scientific Reports, 7 (1) 46567, 46567.1-46567.14. doi: 10.1038/srep46567
2017
Journal Article
Landscape of histone modifications in a sponge reveals the origin of animal cis-regulatory complexity
Gaiti, Federico, Jindrich, Katia, Fernandez-Valverde, Selene L., Roper, Kathrein E., Degnan, Bernard M. and Tanurdzic, Milos (2017). Landscape of histone modifications in a sponge reveals the origin of animal cis-regulatory complexity. Elife, 6 e22194. doi: 10.7554/eLife.22194
2017
Journal Article
De novo transcriptome assembly reveals high transcriptional complexity in Pisum sativum axillary buds and shows rapid changes in expression of diurnally regulated genes
Kerr, Stephanie C., Gaiti, Federico, Beveridge, Christine A. and Tanurdzic, Milos (2017). De novo transcriptome assembly reveals high transcriptional complexity in Pisum sativum axillary buds and shows rapid changes in expression of diurnally regulated genes. BMC Genomics, 18 (1) 221, 221. doi: 10.1186/s12864-017-3577-x
2015
Journal Article
Dynamic and Widespread lncRNA Expression in a Sponge and the Origin of Animal Complexity
Gaiti, Federico, Fernandez-Valverde, Selene L., Nakanishi, Nagayasu, Calcino, Andrew D., Yanai, Itai, Tanurdzic, Milos and Degnan, Bernard M. (2015). Dynamic and Widespread lncRNA Expression in a Sponge and the Origin of Animal Complexity. Molecular Biology and Evolution, 32 (9), 2367-2382. doi: 10.1093/molbev/msv117
2015
Journal Article
The histone methyltransferase SDG8 mediates the epigenetic modification of light and carbon responsive genes in plants
Li, Ying, Mukherjee, Indrani, Thum, Karen E., Tanurdzic, Milos, Katari, Manpreet S., Obertello, Mariana, Edwards, Molly B., McCombie, W. Richard, Martienssen, Robert A. and Coruzzi, Gloria M. (2015). The histone methyltransferase SDG8 mediates the epigenetic modification of light and carbon responsive genes in plants. Genome Biology, 16 (79) 79, 1-15. doi: 10.1186/s13059-015-0640-2
2014
Journal Article
Differential sRNA regulation in leaves and roots of sugarcane under water depletion
Thiebaut, Flavia, Grativol, Clı´cia, Tanurdzic, Milos, Carnavale-Bottino, Mariana, Vieira, Tauan, Motta, Mariana Romeiro, Rojas, Cristian, Vincentini, Renato, Chabregas, Sabrina Moutinho, Hemerly, Adriana Silva, Martienssen, Robert A. and Ferreira, Paulo Cavalcanti Gomes (2014). Differential sRNA regulation in leaves and roots of sugarcane under water depletion. PLoS One, 9 (4) e93822, e93822.1-e93822.17. doi: 10.1371/journal.pone.0093822
2013
Journal Article
Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
Vidal, Elena A., Moyano, Tomás C., Krouk, Gabriel, Katari, Manpreet S., Tanurdzic, Milos, McCombie, W. Richard, Coruzzi, Gloria M. and Gutierrez, Rodrigo A. (2013). Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots. BMC Genomics, 14 (1) 701, 701.1-701.15. doi: 10.1186/1471-2164-14-701
2012
Journal Article
Computational identification and analysis of novel sugarcane microRNAs
Thiebaut, Flavia, Grativol, Clicia, Carnavale-Bottino, Mariana, Rojas, Cristian Antonio, Tanurdzic, Milos, Farinelli, Laurent, Martienssen, Robert A., Hemerly, Adriana Silva and Gomes Ferreira, Paulo Cavalcanti (2012). Computational identification and analysis of novel sugarcane microRNAs. BMC Genomics, 13 (1) 290, 290.1-290.14. doi: 10.1186/1471-2164-13-290
2012
Book Chapter
Reverse Genetic Analyses of Gene Function in Fern Gametophytes
Rutherford, George, Tanurdzic, Milos, Hasebe, Mitsuyasu and Banks, Jo Ann (2012). Reverse Genetic Analyses of Gene Function in Fern Gametophytes. Vascular Plants and Paleobotany. (pp. 54-66) edited by Philip Stewart and Sabine Globig. Point Pleasant, NJ, United States: CRC Press. doi: 10.1201/b12226-6
2012
Book Chapter
Origins of novel phenotypic variation in polyploids
Finigan, Patrick, Tanurdzic, Milos and Martienssen, Robert A. (2012). Origins of novel phenotypic variation in polyploids. Polyploidy and Genome Evolution. (pp. 57-76) edited by Pamela S. Soltis and Douglas E. Soltis. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-31442-1_4
2011
Journal Article
The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Banks, Jo Ann, Nishiyama, Tomoaki, Hasebe, Mitsuyasu, Bowman, John L., Gribskov, Michael, dePamphilis, Claude, Albert, Victor A., Aono, Naoki, Aoyama, Tsuyoshi, Ambrose, Barbara A., Ashton, Neil W., Axtell, Michael J., Barker, Elizabeth, Barker, Michael S., Bennetzen, Jeffrey L., Bonawitz, Nicholas D., Chapple, Clint, Cheng, Chaoyang, Correa, Luiz Gustavo Guedes, Dacre, Michael, DeBarry, Jeremy, Dreyer, Ingo, Elias, Marek, Engstrom, Eric M., Estelle, Mark, Feng, Liang, Finet, Cedric, Floyd, Sandra K., Frommer, Wolf B. ... Grigoriev, Igor V. (2011). The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants. Science, 332 (6032), 960-963. doi: 10.1126/science.1203810
2010
Journal Article
Arabidopsis thaliana chromosome 4 replicates in two phases that correlate with chromatin state
Lee, Tae-Jin, Pascuzzi, Pete E., Settlage, Sharon B., Shultz, Randall W., Tanurdzic, Milos, Rabinowicz, Pablo D., Menges, Margit, Zheng, Ping, Main, Dorrie, Murray, James A. H., Sosinski, Bryon, Allen, George C., Martienssen, Robert A., Hanley-Bowdoin, Linda, Vaughn, Matthew W. and Thompson, William F. (2010). Arabidopsis thaliana chromosome 4 replicates in two phases that correlate with chromatin state. PLoS Genetics, 6 (6) e1000982, e1000982.1-e1000982.18. doi: 10.1371/journal.pgen.1000982
2009
Journal Article
Epigenetic reprogramming and small RNA silencing of transposable elements in pollen
Slotkin, R. Keith, Vaughn, Matthew, Borges, Filipe, Tanurdzic, Milos, Becker, Joerg D., Feijo, Jose A. and Martienssen, Robert A. (2009). Epigenetic reprogramming and small RNA silencing of transposable elements in pollen. Cell, 136 (3), 461-472. doi: 10.1016/j.cell.2008.12.038
2008
Journal Article
Epigenomic consequences of immortalized plant cell suspension culture
Tanurdzic, Milos, Vaughn, Matthew W., Jiang, Hongmei, Lee, Tae-Jin, Slotkin, R. Keith, Sosinski, Bryon, Thompson, William F., Doerge, R. W. and Martienssen, Robert A. (2008). Epigenomic consequences of immortalized plant cell suspension culture. PLoS Biology, 6 (12), 2880-2895. doi: 10.1371/journal.pbio.0060302
2008
Journal Article
ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription
Masuda, Hana Paula, Cabral, Luiz Mors, De Veylder, Lieven, Tanurdzic, Milos, Engler, Janice de Almeida, Geelen, Danny, Inze, Dirk, Martienssen, Robert A., Ferreira, Paulo C. G. and Hemerly, Adriana S. (2008). ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription. EMBO Journal, 27 (20), 2746-2756. doi: 10.1038/emboj.2008.191
2008
Journal Article
Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1
Gutierez, Rodrigo A., Stokes, Trevor L., Thum, Karen, Xu, Xiaodong, Obertello, Mariana, Katari, Manpreet S., Tanurdzic, Milos, Dean, Alexis, Nero, Dannion C., McClung, C. Robertson and Coruzzi, Gloria M. (2008). Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1. Proceedings of the National Academy of Sciences of the United States of America, 105 (12), 4939-4944. doi: 10.1073/pnas.0800211105
2008
Conference Publication
Epigenetic inheritance and reprogramming in plants and fission yeast
Martienssen, R. A., Kloc, A., Slotkin, R. K. and Tanurdzic, M. (2008). Epigenetic inheritance and reprogramming in plants and fission yeast. 73rd Cold Spring Harbor Symposium on Quantitative Biology, Cold Spring Harbor, NY, New York, 28 May - 2 June 2008. Woodbury, NY, United States: Cold Spring Harbor Laboratory Press. doi: 10.1101/sqb.2008.73.062
2007
Journal Article
Epigenetic natural variation in Arabidopsis thaliana
Vaughn, Matthew W., Tanurdzic, Milos, Lippman, Zachary, Jiang, Hongmei, Carrasquillo, Robert, Rabinowicz, Pablo D., Dedhia, Neilay, McCombie, W. Richard, Agier, Nicolas, Bulski, Agnes, Colot, Vincent, Doerge, R. W. and Martienssen, Robert A. (2007). Epigenetic natural variation in Arabidopsis thaliana. PloS Biology, 5 (7), 1617-1629. doi: 10.1371/journal.pbio.0050174
2007
Conference Publication
Silent running: RNA interference and heterochromatic modification
Martienssen, Rob, Zaratiegui, Mikel, Irvine, Danielle, Goto, Derek, Slotkin, Keith, Tanurdzic, Milos, Lippman, Zach, Vaughn, Matt, May, Bruce, Cande, Zac, Colot, Vincent and Doerge, R. W. (2007). Silent running: RNA interference and heterochromatic modification. 16th International Chromosome Conference (ICC 16), Amsterdam, Netherlands, 25-29 August 2007. Dordrecht, Netherlands: Springer. doi: 10.1007/s10577-007-1912-9
2005
Journal Article
Replication, repair, and reactivation
Vaughn, Matthew W., Tanurdzic, Milos and Martienssen, Rob (2005). Replication, repair, and reactivation. Developmental Cell, 9 (6), 724-725. doi: 10.1016/j.devcel.2005.11.011
Funding
Past funding
Supervision
Availability
- Associate Professor Milos Tanurdžić is:
- Available for supervision
Before you email them, read our advice on how to contact a supervisor.
Supervision history
Current supervision
-
Doctor Philosophy
Comparative Analysis of Bud Dormancy Gene Regulatory Networks in Annual and Perennial plants
Principal Advisor
Other advisors: Professor Daniel Ortiz-Barrientos
-
Doctor Philosophy
Functional genomics and epigenomics of bud dormancy in trees
Principal Advisor
Other advisors: Dr Peter Crisp
-
Doctor Philosophy
The role of chromatin regulation in plant development at single cell level
Principal Advisor
Other advisors: Dr Peter Crisp
-
Doctor Philosophy
Investigating and bioengineering grain quality in sorghum
Associate Advisor
Other advisors: Professor Ian Godwin, Associate Professor Marina Fortes, Dr Peter Crisp
-
Doctor Philosophy
The evolution of genetic networks during parallel evolution
Associate Advisor
Other advisors: Professor Daniel Ortiz-Barrientos, Dr Melanie Wilkinson
Completed supervision
-
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2021
Doctor Philosophy
Gene regulation by the plant hormone strigolactone
Principal Advisor
Other advisors: Professor Christine Beveridge
-
2020
Doctor Philosophy
Gene Regulatory Networks Underlying Wheat Root Responses to Nitrate and Phosphate
Principal Advisor
Other advisors: Professor Christine Beveridge, Professor Lee Hickey
-
2024
Doctor Philosophy
The means to an end: Characterising the functions of Drosophila melanogaster microRNAs on virus infection
Associate Advisor
Other advisors: Associate Professor Karyn Johnson
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2024
Doctor Philosophy
Sprouting Sweetness: Investigating the Impact of Sugar Signalling on Shoot Branching
Associate Advisor
Other advisors: Professor Christine Beveridge
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2019
Doctor Philosophy
SUGAR - HORMONE INTERACTIONS REGULATE SHOOT BRANCHING
Associate Advisor
Other advisors: Dr Jim Hanan, Professor Christine Beveridge
-
2017
Doctor Philosophy
Identifying early strigolactone-response genes in the regulation of shoot branching in Pisum sativum
Associate Advisor
Other advisors: Professor Christine Beveridge
-
2017
Doctor Philosophy
Origin and evolution of the metazoan non-coding regulatory genome: Insights from the sponge Amphimedon queenslandica
Associate Advisor
Other advisors: Professor Bernard Degnan
-
2017
Doctor Philosophy
Exploring the bZIP regulatory network in the sponge Amphimedon queenslandica: insights into the ancestral animal regulatory genome
Associate Advisor
Other advisors: Professor Bernard Degnan
-
2015
Doctor Philosophy
Evolutionary and ecological functional genomics of Senecio lautus leaf shape natural variation
Associate Advisor
Other advisors: Professor Daniel Ortiz-Barrientos
Media
Enquiries
Contact Associate Professor Milos Tanurdžić directly for media enquiries about:
- genetics education
- plant development
- plant gene editing
- plant genetics
- plant science
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