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Professor Anthony J. Richardson uses mathematical, statistical, computational and spatial planning tools to investigate human impacts on our oceans - and to find solutions. Particular foci include:

• Marine spatial planning - Where best to locate marine protected areas to minimise impacts on people, maximise ecosystem benefits, ensure they are climate-smart and connected, and enable multiple-use zoning of the ocean.
• Developing models of marine ecosystems - How do lower trophic levels (plankton) regulate fisheries productivity and carbon sequestration, and how will these be impacted by climate change.
• Long-term change in lower trophic levels (plankton) in the ocean. This includes both field work around Australia and global analyses.

Anthony did an undergradulate degree in Mathematics and Biology at the University of Queensland, followed by an Honours degree there. He was awarded a PhD degree from the University of Cape Town in 1998, modelling the dynamics of marine ecosystems. Since 2005, Anthony has held a joint position between UQ (School of the Environment) and CSIRO Environment. He has previously held positions at the University of Cape Town (South Africa), the University of the Western Cape (South Africa), and the Sir Alister Hardy Foundation of Ocean Science (UK).

Anthony runs a dynamic lab at the nexus between conservation science and mathematics. His focus is on using mathematical tools to better conserve biodiversity, predict impacts of climate change, and understand the functioning of marine ecosystems. If you have a background in marine ecology and are interested in applying mathematics/statistics/computational science and want to apply your skills to real-world problems, get in touch.

Ecological and evolutionary genomics

My research group uses genetic markers as tools for understanding dispersal and gene flow, often with conservation implications and most frequently focusing on highly dispersive marine animals such as fishes, mussels, and corals. We also study how gene flow and natural selection affect genomic variation and limit gene exchange across genomes, populations, and species.

Dr Vivian Rincon is a microbiologist from Universidad de Los Andes in Colombia . She joined the University of Queensland (UQ) in 2008 as RA to work in projects related to plant-pathogen interactions and soil microbiology. She obtained a scholarship from the Grain Research and Development Corporation (GRDC) to start her PhD on the effect of tillage on soil microbial communities in wheat fields. Following her studies, she joined Queensland Alliance for Agriculture and Food Innovation (QAAFI) at UQ to work on different aspects of disease management in broadacre crops. Currently, she is a research fellow at the Centre for Horticulturals Science (CHS) working on an integrated disease management approach for the Macadamia industry.

Conjoint Professor Paul Robinson is the Deputy Director of the Children’s Health Environment Program within the Child Health Research Centre (CHRC), and Senior Staff Specialist in Respiratory and Sleep Medicine at the Queensland Children’s Hospital. His research program performs translational research outlining the role of peripheral airway function tests in early lung disease detection and ongoing monitoring of established disease.

He has led the development and standardisation of novel measures of lung function across the entire age range from infancy onwards, facilitating the development of commercial equipment available for widespread use. His research focuses on defining the clinical utility of two specific peripheral airway function tests (Multiple breath washout, MBW, and oscillometry) in important obstructive lung diseases (e.g., asthma, cystic fibrosis, and post bone marrow transplant pulmonary graft vs host disease) and in understanding the impacts of environmental exposures. Structure-function relationships have been explored using state-of-the-art imaging techniques, with the aim of also developing new strategies to reduce any radiation exposure associated with these to advance incorporation into clinical care (e.g., ultra-low dose CT).

These novel lung function tools not only in the hospital setting but also in the school and home setting, enabling the successful development of a parent-supervised remote monitoring strategy for asthma which has been shown to reflect clinically meaningful outcomes missed by conventional approaches. In collaboration with industry, this strategy is now being employed in a series of research projects.

Involvement in longitudinal birth cohorts has outlined the early lung function trajectories in health, and the identification of risk factors affecting normal lung development and contributing to the early development of asthma. Studies investigating environmental health have highlighted the adverse effects of ultrafine particle air pollution.

Professor Robinson’s standing as an international expert, both in terms of clinical and research experience, has led to broader leadership roles across national and international levels.

Research interest: Monitoring ecosystem health of coral reefs and seagrass habitats, integrating field and remote sensing image datasets, and the developing applied cost-effective mapping and monitoring approaches. Developed approaches have been adopted as standard practice globally, making a difference in conservation of these valuable habitats. The long term monitoring studies at Heron and Moreton Bay formed the basis for the development of mapping and monitoring over time and space at local to global scale. See here major research impact

Major projects:

• Long term monitoring of benthic composition at Heron Reef (2002-ongoing).
• Long term monitoring of seagrass composition and abundance in Moreton bay Marine Park (2000-ongoing).
• Smart Sat CRC Hyperspectral Remote Sensing of Seagrass and Coral Reefs 2023-2027.
• Developement of Underwater Field Spectrometry and Benthic Photo Collection and Analysis
• 3D GBR Habitat Mapping Project 2015 - ongoing:
• Global habitat mapping project 2019-2023 Allen Coral Atlas .

Current position: Associate Professior in Marine Remote Sensing leading the Marine Ecosystem Monitoring Lab. . Academic Director Heron Island Research Station and affiliated researchers with Centre for Marine Science and Centre for Biodiversity and Conservation Science

Capacity Building and Citizen Science: Capacity: under/post graduate courses; Msc/PhD supervision, workshops/courses; Remote Sensing Educational Toolkit, and online courses (e.g. TNC).Strong supporter of citizen science based projects, as trainer, organiser and advisor for Reef Check Australia, CoralWatch, Great Reef Census and UniDive.

Dr Narottam Saha is specialized in the area of environmental analytical chemistry and geochemistry, with Bachelors and Masters Degrees in Applied Chemistry and Chemical Technology, a second Masters Degree (Distinction) in Environmental Sciences ( University of East Anglia, UEA, UK), and PhD in geochemistry (The University of Queensland). In his Masters study, Saha received a commonwealth scholarship, one of the most prestigious international scholarship schemes, for Master Degree in Environmental Sciences, with special emphasis on Clumped Isotope geochemistry and climate science. In 2014, Saha received Australia’s federal government scholarship (IPRS) for undertaking his PhD degree. Saha’s research achievements were well recognised with awards of Stanley Gray Fellowship from Institute of Marine Engineering, Science & Technology (IMarEST, UK) for coral reef research and National Science and Information & Communication Technology (NSICT) Fellowship (2010) from Government of Bangladesh for heavy metal pollution research.

His multidisciplinary research experiences include biogeochemistry of heavy metals, assessment of carcinogenic and non-carcinogenic risks for the population exposed to heavy metals, clumped isotopes geochemistry in recovering palaeo-climate history and developing trace element proxies in coral carbonate skeleton to trace historical gradients of inshore coastal water quality. His PhD research highlights the potential of self-referencing rare earth elements over traditional trace elemental proxies for reconstructing marine water quality, degradation of which is considered as one of the major threats in declining the Great Barrier Reef (GBR) coral community. He has been the first to have discovered a noble V/Ca proxy, which is decoupled from other commonly used runoff proxies, for monitoring historical catchment clearing and firing in coastal areas. His discovery has direct relevance to environmental protection for reefs in the GBR through promoting better land management with improved water quality.

Katerina is a geologist with a specialization in hyperspectral data analysis as applied to mineral identification and interpretation, with big data integration. She has 15 years of hands-on experience working on both ground-breaking research and commercial activities for greenfield, brownfield and mining projects of various scales around the world. While with Corescan, she pioneered innovation in hyperspectral data acquisition, interpretation, and presentation. She developed and interpreted the results of complex algorithms associated with various mineral hyperspectral signatures. As part of her work, she contributed to geochemical and geotechnical research as applied to hydrothermal mineral alteration patterns associated with several world-class deposits, deposit delineation initiatives, new exploration projects, as well as geoenvironmental studies of acid-rock drainage and mining waste characterization. In her earlier roles, as an exploration geologist, she worked on uranium deposits in Canada, the USA, and Australia, with a focus on the system controls and definition of hydrothermal alteration mineral zonation and spatial patterns. Currently, Katerina is collaborating on several long-term projects with different challenges related to geological and mining industries at the W.H. Bryan Mining and Geology Research Centre, SMI including critical minerals research, mineral and textural characterization as applied to mine waste and tailings, as well as development of educational material and short-course delivery. Specific areas of research and interest include:

• Hydrothermal alteration mineralogy and its characterization using high-resolution hyperspectral data in combination with other micro-analytical techniques
• Remote sensing techniques and data interpretation
• Detailed investigation of a variety of geological environments and mineral deposit settings including epithermal, unconformity-associated uranium, orogenic gold, porphyry, skarn, as well as IOCG
• Minerals and mineral groups, their chemical composition and variations, recognizing hydrothermal alteration patterns and identifying vectors to mineralization
• Establishment of new mineralogical and hyperspectral reflectance tools for drill core characterization for various mining applications

Broad remote sensing skills across terrestrial and aquatic environments. Working to democratise spatial data access and use. Happiest when producing and delivering automated, operational and validated national and global scale products that can be used by scientists, policy and the public.

Susanne leads a vibrant team researching natural ecosystems and agroecosystems focussed on plants, microbes and soil. This aims to advance the circular nutrient economy, the restoration of degraded soils and landscapes, and the sustainable use of Australia's flora in research that is led by Indigenous experts and communities.

Funded PhD and MPhil positions are available in the (i) Bushfood project and the (ii) Next-generation fertilisers project and soil ameliorants project. Honours and Masters projects are available in all active projects. Please register your interest emailing Susanne.Schmidt@uq.edu.au

Active projects:

• Climate smart agriculture: quantifying the benefits of cultural burning in QLD grazing lands (led by Firesticks Alliance, funded by the AustDAF)
• A Deadly Solution: Traditional Knowledge and Western Science for an Indigenous-led Bushfood Industry (ARC Discovery-Indigenous)
• Realising Smart Compost Formulations (End Food Waste CRC)
• Next-generation fertilisers and soil ameliorants (ARC Industry Transformation Training Centre 'Transforming Biosolids')

Completed recent projects

• Environmentally responsive bio-composite fertilisers
• Ecofriendly fertilisers for sustainable farming
• Effective microbial biostimulants in horticulture
• New technologies and management: transforming nitrogen use efficiency in cane production
• Recycled phosphorus from waste streams as efficient sources for agriculture
• License to farm - nitrogen use efficiency in sugarcane production
• Developing sugarcane-legume companion cropping to reduce greenhouse gas emissions
• Spinifex desert grass - ecophysiology and nano-cellulose production for novel biomaterials
• The role of soil microbes to restore soil carbon in tropical reforestation
• Soil carbon sequestration in the Cooloola biosphere chronosequence
• Advancing Livestock Waste as Low Emission-High Efficiency Fertilizers
• Ecogenomic profiling of Queensland sugarcane soils

Dr Shapter's background was originally in Agricultural Science and higher education which evolved to the completion of her PhD in molecular genetics in 2008. Prior to her current appointments she was the senior researcher on ARC linkage, Australian Flora Foundation and RIRDC research grants looking at the genetic foundations of domestication and adaptation in Australian native grasses. She supervised two HDR students and has a strong publication record in this field. Her research interests centre on identifying and developing practical applications for gene sequencing. Fran is passionate about teaching and has worked as a facilitator commercially and trained early career researchers and PhD candidates in Project Management, IP and commercialisation and Leadership. She was a participant in the 2020 summit and was appointed to the federal advisory Rural R&D Council in 2009. Dr Shapter was also a sitting member of the Office of the Gene Technology Regulator's Ethics and Community Consultative Committee, 2016-2020.

Fran began tutoring at the UQ School of Veterinary Science in 2011, in large animal production, parasitology and microbiology. Since then she has held a variety of teaching, research and professional roles based around project management, curriculum design and blended learning design. She was the project manager for a Scholarship of Teaching and Learning (SoTL) grant which developed 40 vertically and horizontally integrated, online, adaptive tutorials for veterinary science students and was co-author on the manual developed by this project. She assisted with the development of a new flexible delivery laboratory animal science course in 2015 and delivers 5 weeks of online learning units into this course currently. She has been part of the SoTL research and evaluation associated with both these projects and has reported outcomes at University showcases annually since 2016.

In 2017 Fran became the new Student Clinical Skills Hub Coordinator, a purpose-built, state-of-the-art self-directed learning facility for students of veterinary science. Whilst undertaking this role student usage, resource availability and online support for the Hub has increased more than tenfold. Fran's aim is to provide a safe, authentic, self-directed learning environment where students can practice their clinical skills in accordance with individual competences, beyond the scheduled contact hours of their programs and further enhance their capacity for self-directed, lifelong learning whilst acknowledging the vast array of qualifications, previous training, life experience and cultural backgrounds each student brings with them to the Hub.In 2020 Fran recieved a UQ Teaching Excellence Award due to the demonstarted impact of the SVS Student Clinical Skills Hub.

In 2019 Fran was appointed as a Lecturer in Veterinary Science, while continuing her role as the Hub's coordinator. She continues to maintain her teaching roles into the veterinary program in animal handling, animal production, reproduction, microbiology, parasitology and plant identification. Fran has an additional role in the School with regard to asissting with the design, development and integration of blended learning resources, after working with the Science faculties blended learning design team in 2018. However her SoTL portfolio is best showcased by the development of the online learning community and training resources she has developed for the Student Clinical Skills Hub. As of June 2021, Fran has also taken on the role of the School of Veterinary Science Honours Program Coordinator.

Dr. Shaygan is a soil scientist. She obtained both BSc and MSc degrees in Agronomy from The University of Tehran, she also has a Master of Environmental Management from The University of Queensland. Dr. Shaygan completed her PhD in Soil Science at The University of Queensland. Before joining SMI, Dr. Shaygan worked with NSW Department of Primary Industries.

Dr. Shaygan's research focuses on rehabilitation of degraded landscapes and mine sites, mine cover design, quantification and modelling of water flow and solute and nutrient transport in porous media, characterization of soil hydrological and mechanical properties and soil salinity management. In addition, Dr Shaygan works on Pongamia trees which have land rehabilitation and carbon sequestration potentials as well as biofuel production potential. Dr. Shaygan’s research interest includes but is not limited to: (i) salinity, (ii) land rehabilitation, (iii) water flow and solute and nutrient transport in porous media, (iv) estimation of water balance parameters, (v) Pongamia trees growth and responses to different environmental conditions.

Nicki is a marine conservation scientist in the Centre for Policy Futures and an Adjunt in the Centre for Biodiversity and Conservation Science, where she focuses on how conservation and biodiversity outcomes can be improved by interfacing science with policy using novel approaches and decision-support tools. Her expertise is in coastal and marine restoration planning and policy, conservation and impact mitigation at the land-sea interface, and marine biodiversity offsets and net gain policy. She is currently the Regulatory Lead for the Reef Restoration and Adaptation Program (RRAP), a partnership between the Great Barrier Reef Foundation and the Australian Institute of Marine Science (AIMS), funded by the Commonwealth Reef Trust. She co-leads a National Environmental Science Program (NESP) on de-risking nature repair in Australia. She previously co-led another National Environmental Science Program (NESP) project on identifying and overcoming the legal barriers to marine and coastal restoration.

Professor Peter Sly is the Director, Children's Health and Environment Program. Professor Sly is a NHMRC Leadership Fellow (L3) and an emeritus paediatric respiratory physician with extensive research experience in respiratory physiology, developmental immunology and children's environmental health. Professor Sly’s research aims to understand the mechanisms underlying chronic childhood lung diseases in order to improve clinical management and to delay or prevent their onset, with consequent reductions in adult lung diseases. A combination of basic science, longitudinal cohort studies and translation of research findings into clinical practice, including clinical trials, are included in three main areas: asthma, cystic fibrosis and children’s environmental health

Professor Sly is an advisor to the World Health Organisation Department of Public Health, Environmental and Social Determinants of Disease and currently serves on International Advisory Boards and committees, including: WHO network of Collaborating Centres in Children’s Environmental Health; Canadian Healthy Infant Longitudinal Development (CHILD) Study, Canada; the Infant Lung Health Study, Paarl, South Africa; and A SHARED Future: Achieving Strength, Health, and Autonomy, through Renewable Energy Development for the Future.

RESEARCH INTERESTS Fire Ecology, Restoration Ecology, Ecological Genomics, Wildlife Science, Conservation Biology, Invasive Plants

My research group studies fire ecology and conservation biology. Currently, we are working on:

• Using fire to benefit plant biodiversity and manage invasive plants
• Predicting effects of changing fire regimes on plant-animal interactions
• Native grassland restoration
• Biodiversity in agricultural landscapes

We have a special interest in plants and animals living in fire-prone areas because of the fascinating fact that these ecosystems are never static but continually re-shaped by cycles of fire and regeneration. While being grounded in fundamental biology and ecological theory, our research is always aimed at improving knowledge for biodiversity conservation. Our work has applications in fire management, biological invasion and threatened species conservation.

TECHNICAL APPROACHES: POPULATION GENETICS | SPATIAL LANDSCAPE GENETICS | DEMOGRAPHIC SIMULATION MODELLING | STATISTICAL MODELLING OF POPULATIONS & COMMUNITIES | BIOINFORMATICS | SPATIAL ANALYSIS IN R | We also know how to drop a hand-made 1 x 1 m polypipe quadrat on the ground and do good old-fashioned field work.

TEACHING: I teach ecology, wildlife science and environmental science at UQ. My teaching and coordination activities have included Elements of Ecology (AGRC1032), Wildlife Technology (ANIM3018) and People Fire & Environment (ENVM3215 / ENMV7530).

EDITORIAL I am Associate Editor for Wildlife Letters (2023–)

I was Associate Editor for Journal of Applied Ecology for four years (2018–2022).

CURRICULUM VITAE

• 2019 – current Lecturer, University of Queensland
• 2018 – 2022 Associate Editor, Journal of Applied Ecology
• 2018 – 2019 Marie Skłodowska-Curie Research Fellow, Trinity College Dublin
• 2016 – 2017 Post-doctoral Research Fellow, Trinity College Dublin
• 2015 – 2016 Post-doctoral Research Assistant, University of Melbourne
• 2015 – 2016 Self-employed Consultant Ecologist, Canberra
• 2012 – 2014 Post-doctoral Research Fellow, Australian National University

EDUCATION

2012 PhD in Ecology, Australian National University

2006 BSc in Biodiversity Conservation Honours, Flinders University

2005 BSc in Biodiversity Conservation, Flinders University

Reconciling biodiversity conservation with development pressures is one of the world’s greatest sustainability challenges. This is particularly true given the myriad ways that human wellbeing directly depends on well-functioning ecosystems. My research seeks to understand where, when and how to manage and conserve landscapes, so as to beneift both nature and people. I use land use change models, coupled with remote sensing and GIS datasets, to predict how future development projects (e.g. mines, hydropower dams, transportation infrastructure) will impact biodiversity and ecosystem services. This information allows us to compare the costs and benefits of alternative management interventions and, ultimately, provides the knowledge needed to make more informed decisions. My research benefits from collaborating across disciplines (ecology, economics, engineering) and working alongside government and non-government organizations. I am currently conducting projects in Australia, Brazil and the USA.

I'm a quantitative community ecologist with broad experience across terrestrial and marine systems, modern and geological time, local and global scales with both theoretical and practical focus. I'm driven by discovery, interested in myriad topics on how communities form and function, but particularly how we measure and make comparisons between communities.

• Translating anomaly detection to ecology: In a world experiencing climate change, biodiversity loss and other human impacts, detecting anomalous ecological systems accurately and early potentially offers vast benefits to conservation and ecosystem management. Anomaly detection is a fast-moving area of research applied in fields as varied as banking fraud detection, cybersecurity and cancer diagnosis. These fields deal with data as complex and incomplete as ecology, but we haven't plumbed this expertise for benefits to ecology. This is the primary focus of my DECRA.
• Grounding ecological novelty for practical use: Ecologists have been talking about novel systems for twenty years, and related topics (such as "no-analog systems") for even longer. Despite well-cited work on how "novel" can be a useful label for ecological restoration, there's a mismatch between management frameworks, which often use ad-hoc qualitative criteria, and quantitative novelty research, which has been mostly performed at global scales. Understanding how to measure novelty, how analytic choices affect measurements, and how to downscale our inferences to be practicable, has been a focus for me and my colleagues.
• The linguistic evolution of programming languages: The use of scientific programming languages like R, Python and Julia are becoming not only popular, but mandatory skills for researchers. The utility of these languages has been improved by new versions and a plethora of community-created addon packages. This approximates features of natural language evolution, where lexicon changes over time. Understanding the speed and direction of how programming languages evolve can give us a unique insight into how humans learn and alter languages, and how we might ensure they remain understandable into the future. I am currently using GitHub as a vast repository of time-stamped programming “texts”, ripe for linguistic analysis.
• Community ecology through the lens of functional traits: It doesn’t matter who you are, it matters what you do. That applies to organisms too. Despite decades of research into how physiology and life history strategy, often proxied through easy-to-measure “functional traits”, functional ecology is still more niche than it should be. Currently my colleagues and I are exploring how a functional lens alters ecological novelty, but I am always thinking about ecology in the light of how organisms live.

Dr Ekaterina Strounina is a Solid State NMR facility manager in the Centre for Advanced Imaging. She has been working in UQ since 2002, specializing in high-field MRI applications and solid-state NMR spectroscopy.