Faculty of Engineering, Architecture and Information Technology
Affiliate of Centre for Marine Science
Centre for Marine Science
Faculty of Science
Availability:
Available for supervision
Dr. Simon Albert has a background in the fields of natural resource management, water quality, marine ecology and climate change. For the past 15 years he has worked at the intersection of these fields in both Australia and Melanesia providing a gradient of social-political-ecological factors. Through this foundation of land-sea connectivity Dr. Albert has developed integrated monitoring approaches that capture temporally and spatially relevant water quality trends. Dr. Albert has worked on a range of resource projects across Melanesia in both a research and consulting capacity. Over the past 10 years of working closely with communities, government and industry, Dr. Albert has established strong networks and is a highly skilled communicator of environmental monitoring and research.
Affiliate of Centre for Biodiversity and Conservation Science
Centre for Biodiversity and Conservation Science
Faculty of Science
UQ Amplify Senior Lecturer
School of the Environment
Faculty of Science
Availability:
Available for supervision
I am primarily interested in how we, as scientists, can make meaningful contributions to halting and reversing the ongoing global biodiversity crisis. I am particularly committed to tackling gaps in our knowledge needed for biodiversity conservation, focusing on the following three aspects.
(i) Identifying gaps in existing information and their drivers: I have been working on how information on biodiversity is distributed over space, time and taxa, and what causes the existing gaps in information availability.
(ii) Overcoming information gaps with modelling approaches: I have been applying modelling approaches to better inform conservation initiatives through the use of available, imperfect data. For this I have intensively worked on assessing long-term changes in global waterbird diversity (see for example our recent papers in Nature (also see my blog post) and Nature Climate Change (blog post))
(iii) Bridging the research-implementation gap: I am also keen to provide scientific information for conservation in a more accessible way and have been involved in the Conservation Evidence project as a statistical editor, with the aim of contributing to the implementation of evidence-based decision making in conservation.
I am leading the translatE project (transcending language barriers to environmental sciences), funded by the Australian Research Council, which incorporates the above three aspects in order to understand the consequences of language barriers in biodiversity conservation. The project aims to:
assess the importance of scientific knowledge that is available in non-English languages,
understand how language barriers impede the application of science in decision making,
quantify language barriers to the career development of non-native English speaking scientists, and
devise solutions for exchanging information across languages and cultures in an effective manner.
See our work on language barriers in science featured in Nature in 2019 and July and August in 2023, Science in 2020 and 2023, The Conversation in 2021 and 2023, The Guardian, and The Economist, and my presentation on findings from the project (plenary at the 2022 Joint Conference of the Ecological Society of Australia and the Society for Conservation Biology Oceania: from 48:48).
Also see the website of Kaizen Conservation Group for our research, members and latest publications.
I am also an affiliated researcher at the Centre for Biodiversity and Conservation Science.
As a teaching and research academic within the School of the Environment at the University of Queensland, I research the biology and genetics of mosquitoes in our region of the Indo-Pacific that delivers fundamental knowledge into the role mosquitoes play in mosquito-borne disease. This work moves across basic and applied research and has advanced our understanding of mosquitoes, their evolution, species’ distributions, permitting better focused mosquito control to be imagined. More recent research involves exploring new environmentally friendly biological control tools such as using the Wolbachia bacterium and genetic modification to combat mosquito-borne disease.
For more detail on my research please see below and at this link http://www.nigelbeebe.com
Affiliate of Centre for Biodiversity and Conservation Science
Centre for Biodiversity and Conservation Science
Faculty of Science
Postdoctoral Research Fellow
Centre for Biodiversity and Conservation Science
Faculty of Science
Availability:
Available for supervision
Media expert
Lily is a movement ecologist and Postdoctoral Research Fellow. She is interested in how and where highly mobile predators travel, what their journeys can teach us about their evolutionary histories, and how to translate research findings into effective conservation policies. At UQ, in affiliation with the Centre for Biodiversity and Conservation Science, she is currently working on using animal tracking data and network models to understand migratory connectivity in the oceans. She received her BSc (Hons) from the University of Queensland, studying the thermal physiology and behaviour of wild saltwater crocodiles. In her PhD, at the University of Cambridge, she investigated the foraging ecology of albatrosses and petrels across the Southern Ocean.
Methods and applications of statistics in evolutionary biology and population ecology.
My research involves the application and development of statistical methods in ecology, evolutionary biology, and general whole-organism biology. My two particular research foci are phylogenetic comparative methods and other uses of statistics in ecology, evolution, and systematics. I also have a strong interest in the application of Bayesian methods, and the statistical philosophy of the nature of evidence in whole-organism biology. How and why do scientists agree that certain data are evidence for or against a particular hypothesis?
I also provide a statistical consultation service for staff and students within the School of Biological Sciences
I am interested in taking graduate students at any level who are interested in quantitative methods in biology. Students in my lab will be able to (or be willing to learn) program computers in S (http://www.r-project.org), a compiled language such as C or Fortran, and/or a scripting language such as Python or Scheme in a Unix environment. Students are also encouraged to extend or develop their mathematical skills. A background in biology, statistics, mathematics, or computer science would be valuable. I can also co-supervise students who are interested in using quantitative methods for their thesis work, but for whom such methods are not a primary focus of research.
Faculty of Engineering, Architecture and Information Technology
Availability:
Available for supervision
Media expert
Before joining the University of Queensland, Dave P. Callaghan held positions within industry including Parsons Brinckerhoff and Lawson and Treloar and research sector including Nederlands Instituut voor Ecologie and the University of Queensland. He is an observer of the Queensland Water Panel and active in the newly created Australian Hydraulic Modelling Association. He is the author of a book section and more than 50 other technical documents with applied and research applications. He is a consultant to private and government organisations. He has worked recently with private and government organisations to improve understanding of extreme coastal weather responses. He is recognised for leading edge research in coastal engineering including statistics of extremes, beach erosion from extreme events, physical and biological interactions of salt marshes and coral reefs, lagoon dynamics and wave propagation.
Affiliate Associate Professor of Queensland Brain Institute
Queensland Brain Institute
Availability:
Available for supervision
Media expert
A/ Prof. Karen Cheney is a marine ecologist employing a multidisciplinary approach to explore predator-prey interactions, animal signalling, and the fundamental principles behind the evolution and function of animal colour patterns. Her research spans sensory, behavioral, and chemical marine ecology, with a particular focus on marine fish and molluscs. She co-leads the Marine Sensory Ecology Group at UQ.
She is also the Academic Director of the Moreton Bay Research Station, where she is oversees the teaching and research conducted at the station. She also co-leads research projects on understanding the ecosystem services of shellfish reef restoration, and the conservation of the threatened seahorse, Hippocampus whitei, in SE Queensland. She is also the Deputy Director of the Centre for Marine Science.
Animal Signalling: She focuses on the evolution of animal signals in the marine environment, particularly those used for camouflage and warning signals (aposematism). Her research employs spectrophotometry, theoretical vision models, phylogenetic comparative analysis, and a novel method using a calibrated underwater camera system to analyse complex animal colour patterns. This innovative approach enables simultaneous in-situ collection of spatial and spectral properties of animals and their backgrounds. She specifically investigates the diversity of colour signals displayed by nudibranch molluscs, examining how these patterns are perceived by potential predators and their relationship to the unpalatability and toxicity of the molluscs’ stored chemical defences.
Colour Vision: She studies the visual performance of coral reef fish using behavioural assays inspired by tests used to screen for human color vision deficiencies. By relating behavioural data to theoretical visual modelling, she assesses the accuracy of these models. More broadly, she explores the sensory, neural, and cognitive foundations of colour perception and investigates the genetic basis for the diversification of visual systems.
An ecologist by training – I hold a B.Sc. (Hons) in Marine Ecology from the University of North Carolina, Wilmington and a Ph.D. in Ecological Modelling from Griffith University. I am broadly interested in exploring new ways to (1) understand how natural communities are formed and (2) predict how they will change over time. As an Amplify Fellow at UQ, my current research focuses on developing computational tools and adapting techniques from epidemiology and statistical forecasting to study how organisms and ecosystems respond to environmental change. This work is being applied to investigate natural dynamics for a range of natural systems including host-parasite interactions, wildlife populations and veterinary diseases.
I am an active member of the R community and have written and/or maintain several popular R packages. For example, I’m a lead developer on the MRFcov package for multivariate conditional random fields analyses. I also wrote the mvgam R package for fitting dynamic Generalised Additive Models to analyse and forecast multivariate ecological time series, and I regularly provide training seminars and workshops to help researchers learn techniques in ecological data analysis.
I am currently seeking Honours and PhD candidates with interests and/or skills in veterinary epidemiology, spatial / spatiotemporal modeling and quantitative ecology.
Evolutionary and ecological genomics of marine invertebrate animals.
Animals evolve because their genomes need to respond to the constantly changing environment presented by both their external habitat and their internal microbial symbionts. Over evolutionary time, these different factors interact during development, when the animal body plan is being established, to generate the extraordinary animal diversity that graces our planet. In ecological time, early life history stages must detect and respond to the precise nature of their environment to generate a locally-adapted functional phenotype. Using coral reef invertebrates from phyla that span the animal kingdom, we study these gene-environment interactions using genomic, molecular and cellular approaches combined with behavioural ecology in natural populations. We work mostly with embryonic and larval life history stages of indirect developers, as these are crucial to the survival, connectivity, and evolution of marine populations. When not immersed in the molecular or computer lab, we are lucky enough to be immersed in the ocean, often in beautiful places!
Affiliate Associate Professor of School of Agriculture and Food Sustainability
School of Agriculture and Food Sustainability
Faculty of Science
Affiliate of Centre for Horticultural Science
Centre for Horticultural Science
Queensland Alliance for Agriculture and Food Innovation
Associate Professor in Env Science
School of the Environment
Faculty of Science
Availability:
Available for supervision
Paul Dennis leads an exciting research group that applies cutting-edge technologies to understand the roles of microorganisms and their responses to environmental change.
He is also a passionate educator and public speaker who advocates for the importance of biological diversity and evidence-based environmental awareness. He has talked about his research on ABC Radio and a range of other media outlets.
His teaching covers aspects of ecology, microbiology, plant and soil science, and climatology. He considers these topics to be of fundamental importance for the development of more sustainable societies and takes pride in helping others to obtain the knowledge and skills they need to build a better future.
Paul's research has taken him to Antarctica, the Amazon Rainforest, high mountains and oceans. The approaches used in his lab draw on a wide range of expertise in molecular biology, ecology, statistics, computer science, advanced imaging and soil science. He applies these skills to a wide-range of topics and systems including plant-microbe interactions, Antarctic marine and terrestrial ecology, biogeography, pollution and human health.
Most of my research is quantitative field ecology in the big natural playground of Queensland. I do ecology because I want to help avoid extinction and better manage Australia’s natural resources, and also because discovery is extremely enjoyable. In 2010 I am working with co-workers on editing of Ludwig Leichhardt’s diaries, woody vegetation dynamics, artesian desert springs, grazing dynamics in the arid zone, the role of fire in savannas and establishing a large project to facilitate ecosystem restoration within an emerging carbon economy. I have far more ideas than capacity to fulfil them, so welcome committed post-grads to discuss potential projects.
Research themes:
Artesian springs
Artesian springs are isolated oases in a sea of arid-lands containing weird and wonderful endemic creatures including snails, crustacea, plants and fish. The springs provide a focus for research relating to their hydrological function, conservation, optimum management and biogeographic history.
Woody vegetation dynamics
The processes that drive changes in woody plant abundance, including drought-induced dieback, fire, woody plant expansion, aka woody thickening, invasive scrub, woody plant encroachment have been a focus of attention. The issue has been addressed through systematic survey, field and nursery experiments, physiological studies and with systematic use of the historic record, including aerial photography, old survey charts and explorers notes.
Arid-zone grazing
A review of water-remote grazing effects prompted a program of work that will utilise long–term grazing exclosures, water-remote gradients and the ecology of rare plants to build a deeper understanding of grazing in arid landscapes.
Integrating the carbon economy into conservation
This arena provides a broad scope to examine the dynamics of carbon in terrestrial ecosystems, extend our understanding of biodiversity in Australia, and to understand the trade-offs between managing for carbon and for biodiversity
Principal Research Fellow and Interim Academic Director, Hidden Vale
School of the Environment
Faculty of Science
Affiliate of Centre for Biodiversity and Conservation Science
Centre for Biodiversity and Conservation Science
Faculty of Science
Availability:
Available for supervision
Media expert
My research interests include causes and detectability of extinction and decline, conservation ecology of threatened and declining marsupials (especially dasyurids and macropods), and tropical mammals, evolutionary ecology, mating systems and life history evolution, especially associations between life histories and seasonality, climate and sexual selection.
My long-term interest in conservation and evolutionary ecology of carnivorous marsupials started at The University of Sydney, where I was an Honours student of Chris Dickman. I did a PhD on ecology of bridled nailtail wallabies at The University of Queensland with Craig Moritz and Anne Goldizen. My research fellowships and programmes since then have investigated ecology and evolution of mammals: a Royal Society fellowship at the University of Aberdeen with Xavier Lambin, an ARC APD fellowship at ANU with Andrew Cockburn, and an ARF fellowship, and a Future Fellowship and UQ Fellowship at The University of Queensland School of Biological Sciences.
I have worked in state environment agencies and the Australian Museum at times before joining UQ in 2007. I am co-chair of the IUCN Marsupial and Monotreme Specialist Group (with Professor John Woinarski), chair of the Australasian Mammal Taxonomy Consortium (affiliated with the Australian Mammal Society), and winner of the 2020 ESA Australian Ecology Research Award.
History:
Principal Research Fellow / Deputy Academic Director UQ Hidden Vale Research Station/ Associate Professor, School of the Environment / Centre for Biodiversity and Conservation Science, UQ. Jan 2022-
UQ Fellow, School of Biological Sciences, University of Queensland. Conservation and life history evolution of mammals in Australia and Melanesia. January 2016 – December 2018.
ARC Future Fellow / Senior Lecturer, School of Biological Sciences, University of Queensland. Life history evolution, extinction and conservation ecology of carnivorous marsupials. January 2012 – December 2015.
ARC Australian Research Fellow, School of Biological Sciences, University of Queensland. Causes of animal extinction and rediscovery, detection of extinction and trajectories of decline in mammals with respect to the spread of invasive predators. January 2007 – December 2011.
Natural Heritage Trust, federal Department of Environment and Heritage, Canberra. Collating published data on threats to nationally endangered vertebrates under the EPBC Act, for the Species Profiles And Threats database. Part time, January- December 2006.
ARC Postdoctoral Fellow, Division of Botany and Zoology, Australian National University, Canberra. Testing hypotheses to explain the evolution of polyandry, using antechinuses. April 2002 to February 2006 (maternity leave December 2004 – October 2005).
Royal Society Postdoctoral fellow, Department of Zoology, University of Aberdeen. Behavioural mechanisms of density-dependent immigration and implications for population dynamics in the water vole. Jan 2000 - April 2001 (maternity leave April 2001 – April 2002).
Postdoctoral Research Associate, Department of Zoology and Entomology, University of Queensland. Ecological correlates of marsupial life histories, behaviour and social organisation. 1999 - 2000.
PhD. The Department of Zoology and Entomology, University of Queensland, supervised by Professor Craig Moritz and Dr Anne Goldizen: Behavioural ecology and demography of the bridled nailtail wallaby, Onychogalea fraenata 1994 - 1998.
My lab investigates the physiological and behavioural responses of fish, frogs and reptiles to changing environmental conditions including assessing and predicting the impact of human-induced environmental change. A major thrust of this research is within the emerging field of Conservation Physiology. We are particularly interested in the capacity and plasticity of physiological systems (e.g. respiratory, cardiovascular, osmoregulatory, digestive and musculo-skeletal) to compensate and maintain performance under changing environmental conditions.
We combine lab-based experimental studies with fieldwork, and take an integrative approach that utilises ecological, behavioural, physiological and genomic methodologies. In the field we utilise remote sensing technology (acoustic and satellite telemetry, archival tags) to investigate the movement patterns and behaviours of animals in relation to environmental conditions.
Current projects include:
assessing the effects of increasing temperatures on sharks, frogs, turtles and crocodiles;
determining the physiological basis for the impact of increasing UV-B radiation on frogs;
diving behaviour and physiology of freshwater turtles and crocodiles;
acoustic and satellite tracking of sharks, turtles and crocodiles in Queensland;
regulation of physiological function in aestivating frogs
Affiliate of Centre for Biodiversity and Conservation Science
Centre for Biodiversity and Conservation Science
Faculty of Science
Professor
School of the Environment
Faculty of Science
Availability:
Not available for supervision
Media expert
The actions of people just like you and me have caused a massive biodiversity crisis, pushing many species to the brink of extinction and beyond. Doing something about this is one of the most important and urgent problems globally. I am interested in understanding how people have affected the natural world around them, and how some of their destructive effects can best be reversed. On the flip side, I am also keen to understand whether people can benefit positively from experiences of biodiversity.
To answer these questions I work on pure and applied topics in biodiversity and conservation. Much of my work is interdisciplinary, focusing on the interactions between people and nature, how these can be enhanced, and how these relationships can be shaped to converge on coherent solutions to the biodiversity crisis. Current research topics include the ecology and conservation of migratory species, understanding what drives some people to show stronger environmental concern than others, and strategies for designing efficient conservation plans. I enjoy working closely with all my wonderful colleagues in the Centre for Biodiversity and Conservation Science.
Vanessa is a plant ecologist working primarily in mine-disturbed areas, and also manages the Institute’s environmental laboratories. Vanessa’s work primarily encompass two themes: investigations of ecosystem resilience and ecosystem successional processes in rehabilitated plant communities; and disturbance impacts on rare and threatened plants. From this perspective, insights into mine closure issues are gained, particularly regarding feasibility of achieving benchmark rehabilitation goals, risk of rehabilitation failure, and knowledge management.
Vanessa has been a researcher at CMLR since 2008. Prior to that, Vanessa applied her research and technical expertise to projects on weed invasion, wallum vegetation, Bridled Nailtail Wallaby habitat and conservation, community-based riparian restoration, and vegetation protection on private land, as well as working for several years in the music industry. Her research work at SMI runs concurrently with her role as a laboratory manager, where she applies technical and organisational skills to ensure the Institute’s environmental laboratories run safely and efficiently. Her success has been recognised with several staff excellence awards.
Vanessa is a member of the Ecological Society of Australia, the Environment Institute of Australia and New Zealand, and TechNet Australia.
Dr. Laura Grogan is a qualified veterinarian, Senior Lecturer in Wildlife Science, Chair of the Wildlife Disease Association Australasian section, and Leader of the Biodiversity Health Research Team (https://www.biodiversity-health.org/) - a collaborative multiple-university research group focused on finding sustainable solutions for the most challenging threatening processes currently affecting biodiversity.
Dr. Grogan has a background in research on wildlife diseases, ecology and conservation. She's particularly interested in investigating the dynamics, relative importance, and impacts of infectious diseases among other threats affecting wildlife across both individual and population scales, to improve conservation management. While she works across taxa and methodological approaches, her main study system currently involves the devastating amphibian fungal skin disease, chytridiomycosis, where at the individual scale she focuses on the pathogenesis and amphibian immune response to the disease, untangling the roles of resistance and tolerance in defense against infection. At the population and landscape scale she explores mechanisms underlying persistence in the face of endemic infection, focused on the endangered Fleay's barred frog. She also studies population and infection dynamics of chlamydiosis in koala using a mathematical modelling approach, exploring the relative benefits of different management approaches. In addition to working on amphibian and koala diseases, Laura is a keen birdwatcher, wildlife photographer and artist. She supervises projects across wildlife-related fields (predominantly vertebrates).
You can find out more about her research team here: www.biodiversity-health.org. Dr. Grogan has been awarded around $1.3 million in research funding since 2018. In late 2019 she was awarded an Australian Research Council Discovery Early Career Researcher Award (DECRA; DE200100490), worth $426,742. This project, titled "Understanding infection tolerance to improve management of wildlife disease", commenced in late 2020. Dr. Grogan was identified as one of the four top-ranked science DECRA awardees by the Australian Academy of Science’s 2020 J G Russell Award, and was also recipient of the highest award of the Wildlife Disease Association Australasia Section with their 2019 Barry L Munday Recognition Award.
PhD and Honours projects are now available in the following areas (plus many more areas - please get in touch if you have an idea):
Can frogs be ‘vaccinated’ by antifungal treatment of active infections to develop protective immunity to the devastating chytrid fungus? (Principal Supervisor)
Establishing the conservation status of south-east Queensland’s amphibians - occupancy surveys and species distribution models (Principal Supervisor)
Tadpoles as a reservoir of the lethal frog chytrid fungal disease – measuring sublethal effects on growth, time to metamorphosis and ability to forage (mouthpart loss) (Principal Supervisor)
Impacts of chytrid fungus on the survival of juvenile endangered Fleay’s barred frogs, Mixophyes fleayi, and importance for population recruitment (Principal Supervisor)
Measuring the infection resistance versus tolerance of barred frogs to the devastating chytrid fungal disease to improve management outcomes (Principal Supervisor)
Mapping the impacts of fire-fighting chemicals on endangered frog habitats (Co-Supervisor)
Bowra birds: what do long-term monitoring data reveal about bird communities in the semi-arid region? (Co-Supervisor)
Impacts of fire-fighting chemicals on endangered frogs: Implications for conservation and management (Co-Supervisor)
My research interests are in coral reef ecology and marine parasitology.
I also incorporate other fields in my research including evolutionary biology, molecular biology, parasitology, and animal behaviour. I use field observations to generate hypotheses which are tested using field and laboratory experiments.
Currently, I have research programmes at Lizard Island on the Great Barrier Reef and on campus.
Specific projects include:
Cleaning symbiosis as a model system for developing and testing models of non-kin cooperation in multispecies mutualisms
The ecological significance of cleaning behaviour in reef fishes
The direct and indirect effects of cleaner fish on the coral reef community
Interactions between larval coral reef fish and parasites
The effects of parasites on fish physiology
The taxonomy of gnathiid isopods and their identification using DNA
The role of colour and pattern in communication among animals
The molecular and colour pattern biogeography of cleaner fish
Affiliate of Centre for Biodiversity and Conservation Science
Centre for Biodiversity and Conservation Science
Faculty of Science
Research Fellow
School of the Environment
Faculty of Science
Availability:
Available for supervision
Valerie’s research focusses on coastal ecosystem conservation and restoration. She holds an AXA-UNESCO research fellowship on mangrove community forestry for resilient coastal livelihoods, endorsed as an action of the UN Ocean Decade. She co-leads a National Environmental Science Program (NESP) project on carbon abatement and biodiversity enhancements from controlling feral ungulates in wetlands in Australia and is developing a framework to measure verified biodiversity benefits in coastal wetland restoration projects in partnership with CSIRO. She recently led a NESP project on coastal wetland restoration opportunities in Australia for blue carbon and co-benefits for biodiversity, fisheries, water quality, and coastal protection and an Australian Research Council linkage project to identify social and ecological conditions that enable effective mangrove conservation over global and regional scales with partners at The Nature Conservancy and Healthy Land and Water. She has published research on the drivers of global mangrove losses and gains and coastal wetland restoration opportunities. She has co-authored international guidelines on mangrove restoration with Conservation International and incorporation of coastal wetlands into national greenhouse gas inventories with the Australian Government International Blue Carbon Partnerships. Valerie is an experienced ecologist and is a board member of the Society of Ecological Restoration Australasia and a representative of Australia’s Restoration Decade Alliance.
Queensland Alliance for Agriculture and Food Innovation
Availability:
Available for supervision
Media expert
I undertake multi-disciplinary collaborative research developing mathematical, computational and visualisation approaches and techniques that facilitate the research and education in animal and plant systems.
My major research theme is development of mathematical, computer graphics and simulation approaches and techniques that facilitate the study of genetics, physiology, morphogenesis and ecology at the scale of cells, individual plants and insects and their components. These developments in computational biology are being used to increase our understanding of the dynamics of morphogenesis, and as a tool in applied research and education.