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2017 Journal Article Data compression can discriminate broilers by selection line, detect haplotypes, and estimate genetic potential for complex phenotypesHudson, N. J., Hawken, R. J., Okimoto, R., Sapp, R. L. and Reverter, A. (2017). Data compression can discriminate broilers by selection line, detect haplotypes, and estimate genetic potential for complex phenotypes. Poultry Science, 96 (9), 3031-3038. doi: 10.3382/ps/pex151 |
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2017 Journal Article Proteogenomics reveals enriched ribosome assembly and protein translation in Pectoralis major of high feed efficiency pedigree broiler malesBottje, Walter G., Lassiter, Kentu, Piekarski-Welsher, Alissa, Dridi, Sami, Reverter, Antonio, Hudson, Nicholas J. and Kong, Byung-Whi (2017). Proteogenomics reveals enriched ribosome assembly and protein translation in Pectoralis major of high feed efficiency pedigree broiler males. Frontiers in Physiology, 8 (MAY) 306. doi: 10.3389/fphys.2017.00306 |
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2017 Journal Article Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiencyBottje, Walter, Kong, Byung-Whi, Reverter, Antonio, Waardenberg, Ashley J., Lassiter, Kentu and Hudson, Nicholas J. (2017). Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiency. BMC Systems Biology, 11 (1) 29. doi: 10.1186/s12918-017-0396-2 |
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2017 Journal Article The 'heritability' of domestication and its functional partitioning in the pigPerez-Enciso, M., De Los Campos, G., Hudson, N., Kijas, J. and Reverter, A. (2017). The 'heritability' of domestication and its functional partitioning in the pig. Heredity, 118 (2), 160-168. doi: 10.1038/hdy.2016.78 |
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2017 Journal Article Chicken muscle mitochondrial content appears co-ordinately regulated and is associated with performance phenotypesReverter, Antonio, Okimoto, Ron, Sapp, Robyn, Bottje, Walter G., Hawken, Rachel and Hudson, Nicholas J. (2017). Chicken muscle mitochondrial content appears co-ordinately regulated and is associated with performance phenotypes. Biology Open, 6 (1), 50-58. doi: 10.1242/bio.022772 |
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2017 Journal Article RNA sequencing for global gene expression associated with muscle growth in a single male modern broiler line compared to a foundational Barred Plymouth Rock chicken lineKong, Byung-Whi, Hudson, Nicholas, Seo, Dongwon, Lee, Seok, Khatri, Bhuwan, Lassiter, Kentu, Cook, Devin, Piekarski, Alissa, Dridi, Sami, Anthony, Nicholas and Bottje, Walter (2017). RNA sequencing for global gene expression associated with muscle growth in a single male modern broiler line compared to a foundational Barred Plymouth Rock chicken line. BMC Genomics, 18 (1) 82. doi: 10.1186/s12864-016-3471-y |
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2017 Journal Article Enhanced expression of proteins involved in energy production and transfer in breast muscle of pedigree male broilers exhibiting high feed efficiencyBottje, W. G. , Lassiter, K., Dridi, S., Hudson, N. and Kong, B. W. (2017). Enhanced expression of proteins involved in energy production and transfer in breast muscle of pedigree male broilers exhibiting high feed efficiency. Poultry Science, 96 (7), 2454-2458. doi: 10.3382/ps/pew453 |
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2017 Conference Publication Mitochondrial metabolism: a driver of energy utilisation and product quality?Hudson, N. J., Bottje, W. G., Hawken, R. J., Kong, ByungWhi, Okimoto, R. and Reverter, A. (2017). Mitochondrial metabolism: a driver of energy utilisation and product quality?. 2017 Recent Advances in Animal Nutrition, The University of New England, Armidale, NSW, Australia, 25-27 October 2017. Clayton, VIC Australia: CSIRO Publishing. doi: 10.1071/AN17322 |
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2016 Journal Article Proteomics of breast muscle tissue associated with the phenotypic expression of feed efficiency within a pedigree male broiler line: I. Highlight on mitochondriaKong, Byung-Whi, Lassiter, Kentu, Piekarski-Welsher, Alissa, Dridi, Sami, Reverter-Gomez, Antonio, Hudson, Nicholas James and Bottje, Walter Gay (2016). Proteomics of breast muscle tissue associated with the phenotypic expression of feed efficiency within a pedigree male broiler line: I. Highlight on mitochondria. PloS One, 11 (5) e0159897, e0155679. doi: 10.1371/journal.pone.0155679 |
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2016 Journal Article Disorder of endoplasmic reticulum calcium channel components is associated with the increased apoptotic potential in pale, soft, exudative porkGuo, Bing, Zhang, Wangang, Tume, Ron K., Hudson, Nicholas J., Huang, Feng, Yin, Yan and Zhou, Guanghong (2016). Disorder of endoplasmic reticulum calcium channel components is associated with the increased apoptotic potential in pale, soft, exudative pork. Meat Science, 115, 34-40. doi: 10.1016/j.meatsci.2016.01.003 |
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2015 Journal Article Compression distance can discriminate animals by genetic profile, build relationship matrices and estimate breeding valuesHudson, Nicholas J., Porto-Neto, Laercio, Kijas, James W. and Reverter, Antonio (2015). Compression distance can discriminate animals by genetic profile, build relationship matrices and estimate breeding values. Genetics Selection Evolution, 47 (1) 78. doi: 10.1186/s12711-015-0158-9 |
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2014 Journal Article Longitudinal muscle gene expression patterns associated with differential intramuscular fat in cattleHudson, N. J., Reverter, A., Greenwood, P. L., Guo, B., Cafe, L. M. and Dalrymple, B. P. (2014). Longitudinal muscle gene expression patterns associated with differential intramuscular fat in cattle. Animal, 9 (4), 650-659. doi: 10.1017/S1751731114002754 |
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2014 Conference Publication Upstream and Functional Analysis of Global Gene Expression Associated with Feed Efficiency in a Single Male Broiler LineKong, Byung-Whi, Dridi, Sami, Piekarski, Alissa, Lassiter, Kentu, Cook, Devin, Hudson, Nick and Bottje, Walt (2014). Upstream and Functional Analysis of Global Gene Expression Associated with Feed Efficiency in a Single Male Broiler Line. NEW YORK: ELSEVIER SCIENCE INC. doi: 10.1016/j.freeradbiomed.2014.10.255 |
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2014 Journal Article Sensory rewiring in an echolocator: genome-wide modification of retinogenic and auditory genes in the bat Myotis davidiiHudson, Nicholas J., Baker, Michelle L., Hart, Nathan S., Wynne, James W., Gu, Quan, Huang, Zhiyong, Zhang, Guojie, Ingham, Aaron B., Wang, Linfa and Reverter, Antonio (2014). Sensory rewiring in an echolocator: genome-wide modification of retinogenic and auditory genes in the bat Myotis davidii. G3: Genes, Genomes, Genetics, 4 (10), 1825-1835. doi: 10.1534/g3.114.011262 |
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2014 Journal Article A marker-derived gene network reveals the regulatory role of PPARGC1A, HNF4G, and FOXP3 in intramuscular fat deposition of beef cattleRamayo-Caldas, Y., Fortes, M. R. S., Hudson, N. J., Porto-Neto, L. R., Bolormaa, S., Barendse, W., Kelly, M., Moore, S. S., Goddard, M. E., Lehnert, S. A. and Reverter, A. (2014). A marker-derived gene network reveals the regulatory role of PPARGC1A, HNF4G, and FOXP3 in intramuscular fat deposition of beef cattle. Journal of Animal Science, 92 (7), 2832-2845. doi: 10.2527/jas.2013-7484 |
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2014 Journal Article Differences in muscle transcriptome among pigs phenotypically extreme for fatty acid compositionPuig-Oliveras, Anna, Ramayo-Caldas, Yuliaxis, Corominas, Jordi, Estelle, Jordi, Perez-Montarelo, Dafne, Hudson, Nicholas J., Casellas, Joaquim, Folch, Josep M. and Ballester, Maria (2014). Differences in muscle transcriptome among pigs phenotypically extreme for fatty acid composition. PLoS ONE, 9 (6) e99720, e99720. doi: 10.1371/journal.pone.0099720 |
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2014 Journal Article RNF14 is a regulator of mitochondrial and immune function in muscleIngham, Aaron B., Osborne, Simone A., Menzies, Moira, Briscoe, Suzie, Chen, Wei, Kongsuwan, Kritaya, Reverter, Antonio, Jeanes, Angela, Dalrymple, Brian P., Wijffels, Gene, Seymour, Robert and Hudson, Nicholas J. (2014). RNF14 is a regulator of mitochondrial and immune function in muscle. BMC Systems Biology, 8 (1) 10, 1-12. doi: 10.1186/1752-0509-8-10 |
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2013 Journal Article Inferring the in vivo cellular program of developing bovine skeletal muscle from expression dataHudson, Nicholas J., Lyons, Russell E., Reverter, Antonio, Greenwood, Paul L. and Dalrymple, Brian P. (2013). Inferring the in vivo cellular program of developing bovine skeletal muscle from expression data. Gene Expression Patterns, 13 (3-4), 109-125. doi: 10.1016/j.gep.2013.02.001 |
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2013 Journal Article Gene expression phenotypes for lipid metabolism and intramuscular fat in skeletal muscle of cattleDe Jager, N., Hudson, N. J., Reverter, A., Barnard, R., Cafe, L. M., Greenwood, P. L. and Dalrymple, B. P. (2013). Gene expression phenotypes for lipid metabolism and intramuscular fat in skeletal muscle of cattle. Journal of Animal Science, 91 (3), 1112-1128. doi: 10.2527/jas2012-5409 |
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2013 Journal Article Effect of opioids on tissue metabolism in aestivating and active Green-Striped Burrowing Frogs, Cyclorana alboguttataKayes, Sara M., Cramp, Rebecca L., Hudson, Nicholas J. and Franklin, Craig E. (2013). Effect of opioids on tissue metabolism in aestivating and active Green-Striped Burrowing Frogs, Cyclorana alboguttata. Journal of Herpetology, 47 (2), 369-377. doi: 10.1670/12-039 |
