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2013 Journal Article Genomic evidence for the parallel evolution of coastal forms in the Senecio lautus complexRoda, Federico, Ambrose, Luke, Walter, Gregory M., Liu, Huanle L., Schaul, Andrea, Lowe, Andrew, Pelser, Pieter B., Prentis, Peter, Rieseberg, Loren H. and Ortiz-Barrientos, Daniel (2013). Genomic evidence for the parallel evolution of coastal forms in the Senecio lautus complex. Molecular Ecology, 22 (11), 2941-2952. doi: 10.1111/mec.12311 |
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2009 Journal Article The genetics and ecology of reinforcement: Implications for the evolution of prezygotic isolation in sympatry and beyondOrtiz-Barrientos, Daniel, Grealy, Alicia and Nosil, Patrik (2009). The genetics and ecology of reinforcement: Implications for the evolution of prezygotic isolation in sympatry and beyond. Annals of the New York Academy of Sciences, 1168, 156-182. doi: 10.1111/j.1749-6632.2009.04919.x |
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2009 Journal Article Divergent selection and heterogenous genomic divergenceNosil, Patrik, Funk, Daniel J. and Ortiz-Barrientos, Daniel (2009). Divergent selection and heterogenous genomic divergence. Molecular Ecology, 18 (3), 375-402. doi: 10.1111/j.1365-294X.2008.03946.x |
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2007 Journal Article Gene expression divergence and the origin of hybrid dysfunctionsOrtíz-Barrientos, Daniel, Counterman, Brian A. and Noor, Mohamed A. F. (2007). Gene expression divergence and the origin of hybrid dysfunctions. Genetica, 129 (1), 71-81. doi: 10.1007/s10709-006-0034-1 |
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2005 Journal Article Evidence for a one-allele assortative mating locusOrtiz-Barrientos, Daniel and Noor, Mohamed A. F. (2005). Evidence for a one-allele assortative mating locus. Science, 310 (5753), 1467-1467. doi: 10.1126/science.1121260 |
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2004 Journal Article The genetics of speciation by reinforcementOrtiz-Barrientos, Daniel, Counterman, Brian A. and Noor, Mohamed A. F. (2004). The genetics of speciation by reinforcement. Plos Biology, 2 (12), 2256-2263. doi: 10.1371/journal.pbio.0020416 |
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2002 Journal Article Recombination and the divergence of hybridizing speciesOrtiz-Barrientos, Daniel, Reiland, Jane, Hey, Jody and Noor, Mohamed A.F. (2002). Recombination and the divergence of hybridizing species. Genetica, 116 (2-3), 167-178. doi: 10.1023/A:1021296829109 |
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1999 Journal Article Microsatellites provide evidence of Y-chromosome diversity among the founders of the New WorldRuiz Linares, Andres, Ortiz-Barrientos, Daniel, Figueroa, Mauricio, Mesa, Natalia, Munera, Juan G., Bedoya, Gabriel, Velez, Ivan D., Garcia, Luis F., Perez-Lezaun, Anna, Bertranpetit, Jaume, Feldman, Marcus W. and Goldstein, David B. (1999). Microsatellites provide evidence of Y-chromosome diversity among the founders of the New World. Proceedings of the National Academy of Sciences of the United States of America, 96 (11), 6312-6317. doi: 10.1073/pnas.96.11.6312 |
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2025 Journal Article Agricultural landscape genomics to increase crop resilienceCampbell, Quinn, Bedford, James A., Yu, Yue, Halpin-McCormick, Anna, Castaneda-Alvarez, Nora, Runck, Bryan, Neyhart, Jeffrey, Ewing, Patrick, Ortiz-Barrientos, Daniel, Gao, Lexuan, Wang, Diane, Chapman, Mark A., Rieseberg, Loren H. and Kantar, Michael B. (2025). Agricultural landscape genomics to increase crop resilience. Plant Communications, 6 (2) 101260, 101260. doi: 10.1016/j.xplc.2025.101260 |
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2024 Journal Article Centromeres are hotspots for chromosomal inversions and breeding traits in mangoWilkinson, Melanie J., McLay, Kathleen, Kainer, David, Elphinstone, Cassandra, Dillon, Natalie L., Webb, Matthew, Wijesundara, Upendra K., Ali, Asjad, Bally, Ian S. E., Munyengwa, Norman, Furtado, Agnelo, Henry, Robert J., Hardner, Craig M. and Ortiz‐Barrientos, Daniel (2024). Centromeres are hotspots for chromosomal inversions and breeding traits in mango. New Phytologist, 245 (2), 899-913. doi: 10.1111/nph.20252 |
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2024 Journal Article Gravitropic gene expression divergence associated with adaptation to contrasting environments in an Australian wildflowerBroad, Zoe, Lefreve, James, Wilkinson, Melanie J., Barton, Samuel, Barbier, Francois, Jung, Hyungtaek, Donovan, Diane and Ortiz‐Barrientos, Daniel (2024). Gravitropic gene expression divergence associated with adaptation to contrasting environments in an Australian wildflower. Molecular Ecology e17543, e17543. doi: 10.1111/mec.17543 |
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2024 Journal Article The distribution of fitness effects during adaptive walks using a simple genetic networkO’Brien, Nicholas L. V., Holland, Barbara, Engelstädter, Jan and Ortiz-Barrientos, Daniel (2024). The distribution of fitness effects during adaptive walks using a simple genetic network. PLOS Genetics, 20 (5) e1011289, e1011289. doi: 10.1371/journal.pgen.1011289 |
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2024 Journal Article The genomic consequences of selection across developmentJames, Maddie E. and Ortiz‐Barrientos, Daniel (2024). The genomic consequences of selection across development. Molecular Ecology, 33 (4) e17280, e17280. doi: 10.1111/mec.17280 |
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2023 Journal Article The Ecology of Hybrid IncompatibilitiesThompson, Ken A., Brandvain, Yaniv, Coughlan, Jenn M., Delmore, Kira E., Justen, Hannah, Linnen, Catherine R., Ortiz-Barrientos, Daniel, Rushworth, Catherine A., Schneemann, Hilde, Schumer, Molly and Stelkens, Rike (2023). The Ecology of Hybrid Incompatibilities. Cold Spring Harbor Perspectives in Biology, 16 (9) a041440, 1-31. doi: 10.1101/cshperspect.a041440 |
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2023 Journal Article Hypergraphs and centrality measures identifying key features in gene expression dataBarton, Samuel, Broad, Zoe, Ortiz-Barrientos, Daniel, Donovan, Diane and Lefevre, James (2023). Hypergraphs and centrality measures identifying key features in gene expression data. Mathematical Biosciences, 366 109089, 1-14. doi: 10.1016/j.mbs.2023.109089 |
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2023 Journal Article Crop adaptation to climate change: an evolutionary perspectiveGao, Lexuan, Kantar, Michael B., Moxley, Dylan, Ortiz-Barrientos, Daniel and Rieseberg, Loren H. (2023). Crop adaptation to climate change: an evolutionary perspective. Molecular Plant, 16 (10), 1518-1546. doi: 10.1016/j.molp.2023.07.011 |
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2023 Journal Article Uncovering the genetic architecture of parallel evolutionJames, Maddie E., Allsopp, Robin N., Groh, Jeffrey S., Kaur, Avneet, Wilkinson, Melanie J. and Ortiz‐Barrientos, Daniel (2023). Uncovering the genetic architecture of parallel evolution. Molecular Ecology, 32 (20), 5575-5589. doi: 10.1111/mec.17134 |
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2023 Journal Article Replicated evolution in plantsJames, Maddie E., Brodribb, Tim, Wright, Ian J., Rieseberg, Loren H. and Ortiz-Barrientos, Daniel (2023). Replicated evolution in plants. Annual Review of Plant Biology, 74 (1), 697-725. doi: 10.1146/annurev-arplant-071221-090809 |
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2023 Journal Article Editorial 2023Rieseberg, Loren, Warschefsky, Emily, Ortiz‐Barrientos, Daniel, Kane, Nolan C., Thresher, Kiimberley and Sibbett, Benjamin (2023). Editorial 2023. Molecular Ecology, 32 (1), 1-25. doi: 10.1111/mec.16815 |
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2022 Journal Article The influence of genetic structure on phenotypic diversity in the Australian mango (Mangifera indica) gene poolWilkinson, Melanie J., Yamashita, Risa, James, Maddie E., Bally, Ian S. E., Dillon, Natalie L., Ali, Asjad, Hardner, Craig M. and Ortiz-Barrientos, Daniel (2022). The influence of genetic structure on phenotypic diversity in the Australian mango (Mangifera indica) gene pool. Scientific Reports, 12 (1) 20614, 1-13. doi: 10.1038/s41598-022-24800-7 |
