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2024

Book Chapter

Transforming food production with AI

Cooper, Mark, Hickey, Lee, Jiang, Xianxian, La Fata, Giorgio, Lomas, Harold, Miller, Tim, O’Brien, Susan, Patel, Parth and Tomarchio, Samuel (2024). Transforming food production with AI. Food AI: A game changer for Australia’s food and beverage sector. (pp. 5-13) edited by Janet R. McColl-Kennedy and Damian Hine. Brisbane, QLD, Australia: The University of Queensland, Australia's Food and Beverage Accelerator (FaBA).

Transforming food production with AI

2023

Book Chapter

Incorporating genetics into crop models to identify new phenotypes adapted to climate change

Messina, Carlos D. and Cooper, Mark (2023). Incorporating genetics into crop models to identify new phenotypes adapted to climate change. Modelling climate change impacts on agricultural systems. (pp. 75-104) Cambridge, United Kingdom: Burleigh Dodds Science Publishing. doi: 10.19103/AS.2022.0115.04

Incorporating genetics into crop models to identify new phenotypes adapted to climate change

2023

Book Chapter

Predicting Genotype × Environment × Management (G × E × M) interactions for the design of crop improvement strategies: Integrating breeder, agronomist, and farmer perspectives

Cooper, Mark, Messina, Carlos D., Tang, Tom, Gho, Carla, Powell, Owen M., Podlich, Dean W., Technow, Frank and Hammer, Graeme L. (2023). Predicting Genotype × Environment × Management (G × E × M) interactions for the design of crop improvement strategies: Integrating breeder, agronomist, and farmer perspectives. Plant breeding reviews. (pp. 467-585) edited by Irwin Goldman. Hoboken, NJ, United States: Wiley Blackwell. doi: 10.1002/9781119874157.ch8

Predicting Genotype × Environment × Management (G × E × M) interactions for the design of crop improvement strategies: Integrating breeder, agronomist, and farmer perspectives

2016

Book Chapter

Molecular breeding for complex adaptive traits: how integrating crop ecophysiology and modelling can enhance efficiency

Hammer, Graeme, Messina, Charlie, van Oosterom, Erik, Chapman, Scott, Singh, Vijaya, Borrell, Andrew, Jordan, David and Cooper, Mark (2016). Molecular breeding for complex adaptive traits: how integrating crop ecophysiology and modelling can enhance efficiency. Crop systems biology: narrowing the gaps between crop modelling and genetics. (pp. 147-162) edited by Xinyou Yin and Paul C. Struik. Cham, Switzerland: Springer International Publishing. doi: 10.1007/978-3-319-20562-5_7

Molecular breeding for complex adaptive traits: how integrating crop ecophysiology and modelling can enhance efficiency

2014

Book Chapter

Maize

Smith, Stephen, Cooper, Mark, Gogerty, Joseph, Loffler, Carlos, Borcherding, Delos and Wright, Kevin (2014). Maize. Yield gains in major U.S. field crops. (pp. 125-171) edited by Stephen Smith, Brian Diers, James Specht and Brett Carver. Madison: Crop Science Society of America. doi: 10.2135/cssaspecpub33.c6

Maize

2014

Book Chapter

Future maize hybrid development: Breeding with assistance of molecular and genomics technologies and transgenics

Guo, Mei and Cooper, Mark (2014). Future maize hybrid development: Breeding with assistance of molecular and genomics technologies and transgenics. Genetics, Genomics and Breeding of Maize. (pp. 256-269) Boca Raton, FL United States: CRC Press. doi: 10.1201/b17274

Future maize hybrid development: Breeding with assistance of molecular and genomics technologies and transgenics

2010

Book Chapter

Long-term selection in a commercial hybrid maize breeding program

Duvick, D. N., Smith, J. S. C. and Cooper, M. (2010). Long-term selection in a commercial hybrid maize breeding program. Plant breeding reviews. (pp. 109-151) edited by Jules Janick. Oxford, United Kingdom: John Wiley & Sons. doi: 10.1002/9780470650288.ch4

Long-term selection in a commercial hybrid maize breeding program

2009

Book Chapter

Modelling crop improvement in a GXEXM framework via gene-trail-phenotype relationships

Messina, C., Hammer, G., Dong, Z., Podlich, D. and Cooper, M. (2009). Modelling crop improvement in a GXEXM framework via gene-trail-phenotype relationships. Crop physiology: Applications for Genetic Improvement and Agronomy. (pp. 235-265) edited by Sadras, V.O. and Calderini, D.. Netherlands: Elsevier. doi: 10.1016/B978-0-12-374431-9.00010-4

Modelling crop improvement in a GXEXM framework via gene-trail-phenotype relationships

2008

Book Chapter

Integrating Breeding Tools to Generate Information for Efficient Breeding: Past, Present, and Future

Cooper, M., Smith, O. S., Merrill, R. E., Arthur, L., Podlich, D. W. and Löffler, C. M. (2008). Integrating Breeding Tools to Generate Information for Efficient Breeding: Past, Present, and Future. Plant Breeding: The Arnel R. Hallauer International Symposium. (pp. 141-154) Blackwell Publishing. doi: 10.1002/9780470752708.ch10

Integrating Breeding Tools to Generate Information for Efficient Breeding: Past, Present, and Future

2007

Book Chapter

Modeling QTL effects and MAS in plant breeding

Cooper, Mark, Podlich, Dean W. and Luo, Lang (2007). Modeling QTL effects and MAS in plant breeding. Genomics-Assisted Crop Improvement. (pp. 57-95) Dordrecht: Springer Netherlands. doi: 10.1007/978-1-4020-6295-7_4

Modeling QTL effects and MAS in plant breeding

2006

Book Chapter

Integrating breeding tools to generate information for efficient breeding: past, present, and future

Cooper, M., Smith, O.S., Merrill, R.E., Arthur, L., Podlich, D.W. and Loffler, C.M. (2006). Integrating breeding tools to generate information for efficient breeding: past, present, and future. Plant breeding: the Arnel R. Hallauer International Symposium. (pp. 141-154) edited by Kendall R. Lamkey and Michael Lee. Ames, IA, United States: Blackwell Publishing. doi: 10.1002/9780470752708.ch10

Integrating breeding tools to generate information for efficient breeding: past, present, and future

2006

Book Chapter

Genotype-by-environment interactions under water-limited conditions

Cooper, Mark, van Eeuwijk, Fred, Chapman, Scott C., Podlich, Dean W. and Loffler, Carlos (2006). Genotype-by-environment interactions under water-limited conditions. Drought Adaptation in Cereals. (pp. 51-96) edited by Jean-Marcel Ribaut. New York, NY, United States: Food Products Press.

Genotype-by-environment interactions under water-limited conditions

2005

Book Chapter

Improving drought tolerance in maize

Barker, T., Campos, H., Cooper, M., Dolan, D., Edmeades, G., Habben, J., Schussler, J., Wright, D. and Zinselmeier, C. (2005). Improving drought tolerance in maize. Plant breeding reviews. (pp. 173-253) edited by Jules Janick. Hoboken, NJ, United States: John Wiley & Sons. doi: 10.1002/9780470650301.ch7

Improving drought tolerance in maize

2004

Book Chapter

Drought response index for identifying drought resistant genotypes for rainfed lowland rice in Cambodia

Ouk, M., Fukai, S., Fischer, K. S., Basnayake, J., Cooper, M. and Nesbitt, H. (2004). Drought response index for identifying drought resistant genotypes for rainfed lowland rice in Cambodia. Water in agriculture. (pp. 203-214) edited by V. Seng, E. Craswell, S. Fukai and K. Fischer. Canberra, ACT Australia: Australian Centre for International Agricultural Research.

Drought response index for identifying drought resistant genotypes for rainfed lowland rice in Cambodia

2004

Book Chapter

Changes in performance, parentage, and genetic diversity of successful corn hybrids, 1930-2000

Duvick, Donald N., Smith, J.S.C. and Cooper, M. (2004). Changes in performance, parentage, and genetic diversity of successful corn hybrids, 1930-2000. Corn origin, history, technology, and production. (pp. 65-97) edited by C. Wayne Smith, Javier Betran and E.C.A. Runge. Hoboken, NJ, United States: John Wiley & Sons.

Changes in performance, parentage, and genetic diversity of successful corn hybrids, 1930-2000

2002

Book Chapter

Complexity, quantitative traits and plant breeding: a role for simulation modelling in the genetic improvement of crops

Cooper, M., Podlich, D., Micallef, K. P., Smith, O. S., Jensen, N. M., Chapman, S. C. and Kruger, N. L. (2002). Complexity, quantitative traits and plant breeding: a role for simulation modelling in the genetic improvement of crops. Quantitative Genetics, Genomics and Plant Breeding. (pp. 143-166) edited by M. S. Kang. Wallingford, UK: CAB International.

Complexity, quantitative traits and plant breeding: a role for simulation modelling in the genetic improvement of crops

2002

Book Chapter

Linking biophysical and genetic models to integrate physiology, molecular biology and plant breeding

Chapman, S.C., Hammer, G. L., Podlich, D. and Cooper, M. (2002). Linking biophysical and genetic models to integrate physiology, molecular biology and plant breeding. Quantitative Genetics, Genomics and Plant Breeding. (pp. 167-187) edited by M.S. Kang. Wallingford, UK: CAB International.

Linking biophysical and genetic models to integrate physiology, molecular biology and plant breeding

2001

Book Chapter

Influence of seeding time and seedling age at time of transplanting on the productivity of rainfed lowland rice with different levels of photoperiod sensitivity

Makara, Ouk, Fukai, S., Cooper, M. and Nesbitt, H. J. (2001). Influence of seeding time and seedling age at time of transplanting on the productivity of rainfed lowland rice with different levels of photoperiod sensitivity. Increased lowland rice production in the Mekong region. (pp. 259-270) edited by Shu Fukai and Jaya Basnayake. Canberra, ACT Australia: Australian Centre for International Agricultural Research.

Influence of seeding time and seedling age at time of transplanting on the productivity of rainfed lowland rice with different levels of photoperiod sensitivity

2001

Book Chapter

Leaf-water potential as a drought resistance character in rice

Sibounheuang, V., Basnayake, J., Fukai, S. and Cooper, M. (2001). Leaf-water potential as a drought resistance character in rice. Increased lowland rice production in the Mekong region. (pp. 86-95) edited by Shu Fukai and Jaya Basnayake. Canberra, ACT Australia: Australian Centre for International Agricultural Research.

Leaf-water potential as a drought resistance character in rice

2001

Book Chapter

Using molecular information for decision support in wheat breedings

Eagles, H. A., Cooper, M., Shorter, R. and Fox, P. N. (2001). Using molecular information for decision support in wheat breedings. Plant Genotyping: The DNA Fingerprinting of Plants. (pp. 285-298) edited by R. J. Henry. Wallingford, UK: CABI Publishing.

Using molecular information for decision support in wheat breedings