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2024 Journal Article Integration of single-cell and spatial RNA sequencing uncovers spatiotemporal transition of fruit senescence trajectory from exocarp to mesocarp in Pitaya (Hylocereus undatus)Pang, Xinyue, Sun, Jiaju, Jia, Jingyu, Trusov, Yuri, Chandora, Rahul, Botella, José Ramon, Li, Xin and Gu, Shaobin (2024). Integration of single-cell and spatial RNA sequencing uncovers spatiotemporal transition of fruit senescence trajectory from exocarp to mesocarp in Pitaya (Hylocereus undatus). Postharvest Biology and Technology, 213 112954, 1-12. doi: 10.1016/j.postharvbio.2024.112954 |
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2024 Journal Article Geminiviral-induced genome editing using miniature CRISPR/Cas12j (CasΦ) and Cas12f variants in plantsGong, Zheng, Previtera, Dominic Andrew, Wang, Yijie and Botella, José Ramón (2024). Geminiviral-induced genome editing using miniature CRISPR/Cas12j (CasΦ) and Cas12f variants in plants. Plant Cell Reports, 43 (3) 71, 71. doi: 10.1007/s00299-023-03092-9 |
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2024 Journal Article Conserved Role of Heterotrimeric G Proteins in Plant Defense and Cell Death ProgressionKarimian, Parastoo, Trusov, Yuri and Botella, Jose Ramon (2024). Conserved Role of Heterotrimeric G Proteins in Plant Defense and Cell Death Progression. Genes, 15 (1) ARTN 115, 115. doi: 10.3390/genes15010115 |
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2023 Journal Article A low-cost, portable, dual-function readout device for amplification-based point-of-need diagnosticsZou, Yiping, Mason, Michael Glenn and Botella, Jose Ramon (2023). A low-cost, portable, dual-function readout device for amplification-based point-of-need diagnostics. Applied and Environmental Microbiology, 89 (12) A6, 1-17. doi: 10.1128/aem.00902-23 |
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2023 Journal Article E3 ligases MAC3A and MAC3B ubiquitinate UBIQUITIN-SPECIFIC PROTEASE14 to regulate organ size in ArabidopsisGuo, Xiaopeng, Zhang, Xin, Jiang, Shan, Qiao, Xin, Meng, Bolun, Wang, Xiaohang, Wang, Yanan, Yang, Kaihuan, Zhang, Yilan, Li, Na, Chen, Tianyan, Kang, Yiyang, Yao, Mengyi, Zhang, Xuan, Wang, Xinru, Zhang, Erling, Li, Junhua, Yan, Dawei, Hu, Zhubing, Botella, José Ramón, Song, Chun-Peng, Li, Yunhai and Guo, Siyi (2023). E3 ligases MAC3A and MAC3B ubiquitinate UBIQUITIN-SPECIFIC PROTEASE14 to regulate organ size in Arabidopsis. Plant Physiology, 194 (2), 684-697. doi: 10.1093/plphys/kiad559 |
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2023 Journal Article Changing the diagnostic paradigm for sugarcane: development of a mill-based diagnostic for ratoon stunting disease in crude cane juiceBurman, Sriti, Mason, Michael G., Hintzsche, Jessica, Zou, Yiping, Gibbs, Lucy, MacGillycuddy, Laura, Magarey, Robert C. and Botella, José R. (2023). Changing the diagnostic paradigm for sugarcane: development of a mill-based diagnostic for ratoon stunting disease in crude cane juice. Frontiers in Plant Science, 14 1257894, 1-13. doi: 10.3389/fpls.2023.1257894 |
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2023 Journal Article PDC1 is activated by ABF4 and inhibits seed germination by promoting ROS accumulation in ArabidopsisLi, Liangliang, Li, Linxiao, Cui, Shenghui, Qian, Dongdong, Lyu, Shijie, Liu, Wencheng, Botella, José Ramón, Li, Huilin, Burritt, David J., Tran, Lam-Son Phan, Li, Weiqiang and Zhang, Yu (2023). PDC1 is activated by ABF4 and inhibits seed germination by promoting ROS accumulation in Arabidopsis. Environmental and Experimental Botany, 206 105188, 105188. doi: 10.1016/j.envexpbot.2022.105188 |
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2022 Journal Article Overexpression of AHL9 accelerates leaf senescence in Arabidopsis thalianaZhou, Yusen, Zhang, Xiaomin, Chen, Jing, Guo, Xiaopeng, Wang, Hongyan, Zhen, Weibo, Zhang, Junli, Hu, Zhubing, Zhang, Xuebing, Botella, José Ramón, Ito, Toshiro and Guo, Siyi (2022). Overexpression of AHL9 accelerates leaf senescence in Arabidopsis thaliana. BMC Plant Biology, 22 (1) 248, 1-12. doi: 10.1186/s12870-022-03622-9 |
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2022 Journal Article Insights into the molecular mechanisms of CRISPR/Cas9-mediated gene targeting at multiple loci in ArabidopsisZhang, Zhengjing, Zeng, Wenjie, Zhang, Wenxin, Li, Jing, Kong, Dali, Zhang, Lei, Wang, Rui, Peng, Fangnan, Kong, Zhe, Ke, Yongping, Zhang, Heng, Kim, Chanhong, Zhang, Huiming, Botella, Jose Ramón, Zhu, Jian-Kang and Miki, Daisuke (2022). Insights into the molecular mechanisms of CRISPR/Cas9-mediated gene targeting at multiple loci in Arabidopsis. Plant Physiology, 190 (4), 2203-2216. doi: 10.1093/plphys/kiac431 |
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2022 Journal Article Point-of-care DNA amplification for disease diagnosis and managementBotella, José R. (2022). Point-of-care DNA amplification for disease diagnosis and management. Annual Review of Phytopathology, 60 (1), 1-20. doi: 10.1146/annurev-phyto-021621-115027 |
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2022 Journal Article Are point of management assays relevant for food safety in the poultry industries?Templeton, J. M., Botella, J. R. and Blackall, P. J. (2022). Are point of management assays relevant for food safety in the poultry industries?. Microbiology Australia, 43 (2), 67-70. doi: 10.1071/MA22025 |
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2022 Journal Article Function of protein kinases in leaf senescence of plantsYang, Fengbo, Miao, Yuchen, Liu, Yuyue, Botella, Jose R., Li, Weiqiang, Li, Kun and Song, Chun-Peng (2022). Function of protein kinases in leaf senescence of plants. Frontiers in Plant Science, 13 864215, 1-16. doi: 10.3389/fpls.2022.864215 |
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2022 Journal Article Expanding the editing window of cytidine base editors with the Rad51 DNA-binding domain in riceWei, Chunjie, Liu, Hao, Wang, Wenwen, Luo, Pengyu, Chen, Qiuling, Li, Rou, Wang, Chong, Botella, José Ramón and Zhang, Hui (2022). Expanding the editing window of cytidine base editors with the Rad51 DNA-binding domain in rice. Frontiers in Plant Science, 13 865848, 1-9. doi: 10.3389/fpls.2022.865848 |
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2022 Journal Article Heterotrimeric G protein signaling in abiotic stressWang, Yijie and Botella, Jose Ramón (2022). Heterotrimeric G protein signaling in abiotic stress. Plants, 11 (7) 876, 876. doi: 10.3390/plants11070876 |
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2022 Journal Article The high chlorophyll fluorescence 244 (HCF244) Is potentially involved in glutathione peroxidase 7-regulated high light stress in Arabidopsis thalianaLi, Kun, Jia, Qianyun, Guo, Jinggong, Zhu, Zhijuan, Shao, Mengying, Wang, Jin, Li, Weiqiang, Dai, Jie, Guo, Minghui, Li, Rui, Song, Jieqiong, Yang, Fengbo, Du, Jingyi, Botella, Jose R., Song, Chun-Peng and Miao, Yuchen (2022). The high chlorophyll fluorescence 244 (HCF244) Is potentially involved in glutathione peroxidase 7-regulated high light stress in Arabidopsis thaliana. Environmental and Experimental Botany, 195 104767, 104767. doi: 10.1016/j.envexpbot.2021.104767 |
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2022 Journal Article Abscisic acid-induced cytoplasmic translocation of constitutive photomorphogenic 1 enhances reactive oxygen species accumulation through the HY5-ABI5 pathway to modulate seed germinationChen, Qing‐Bin, Wang, Wen‐Jing, Zhang, Yue, Zhan, Qi‐Di, Liu, Kang, Botella, José Ramón, Bai, Ling and Song, Chun‐Peng (2022). Abscisic acid-induced cytoplasmic translocation of constitutive photomorphogenic 1 enhances reactive oxygen species accumulation through the HY5-ABI5 pathway to modulate seed germination. Plant, Cell and Environment, 45 (5), 1474-1489. doi: 10.1111/pce.14298 |
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2021 Journal Article Non-GM genome editing approaches in cropsGong, Zheng, Cheng, Ming and Botella, Jose R. (2021). Non-GM genome editing approaches in crops. Frontiers in Genome Editing, 3, 817279. doi: 10.3389/fgeed.2021.817279 |
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2021 Journal Article Endogenous U6 promoters improve CRISPR/Cas9 editing efficiencies in Sorghum bicolor and show potential for applications in other cerealsMassel, Karen, Lam, Yasmine, Hintzsche, Jessica, Lester, Nicholas, Botella, Jose R. and Godwin, Ian D. (2021). Endogenous U6 promoters improve CRISPR/Cas9 editing efficiencies in Sorghum bicolor and show potential for applications in other cereals. Plant Cell Reports, 41 (2), 489-492. doi: 10.1007/s00299-021-02816-z |
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2021 Journal Article Tomato and cotton G protein beta subunit mutants display constitutive autoimmune responsesNinh, Thi Thao, Gao, Wei, Trusov, Yuri, Zhao, Jing‐Ruo, Long, Lu, Song, Chun‐Peng and Botella, Jose Ramon (2021). Tomato and cotton G protein beta subunit mutants display constitutive autoimmune responses. Plant Direct, 5 (11) e359, 1-17. doi: 10.1002/pld3.359 |
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2021 Journal Article Heterotrimeric G proteins in plants: canonical and atypical Gα subunitsMaruta, Natsumi, Trusov, Yuri, Jones, Alan M. and Botella, Jose R. (2021). Heterotrimeric G proteins in plants: canonical and atypical Gα subunits. International Journal of Molecular Sciences, 22 (21) 11841, 11841. doi: 10.3390/ijms222111841 |
