|
2021 Journal Article Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinantsBaseggio, Laura, Rudenko, Oleksandra, Buller, Nicky, Landos, Matt, Englestädter, Jan and Barnes, Andrew C. (2021). Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants. Microbial Genomics, 7 (4) 000562, 1-14. doi: 10.1099/mgen.0.000562 |
|
2021 Journal Article Immersion challenge of naïve Atlantic salmon with cultured Nolandella sp. and Pseudoparamoeba sp. did not increase the severity of Neoparamoeba perurans-induced amoebic gill disease (AGD)English, Chloe J., Botwright, Natasha A., Adams, Mark B., Barnes, Andrew C., Wynne, James W., Lima, Paula C. and Cook, Mathew T. (2021). Immersion challenge of naïve Atlantic salmon with cultured Nolandella sp. and Pseudoparamoeba sp. did not increase the severity of Neoparamoeba perurans-induced amoebic gill disease (AGD). Journal of Fish Diseases, 44 (2) jfd.13319, 149-160. doi: 10.1111/jfd.13319 |
|
2020 Journal Article Polychaetes (Perinereis helleri) reared in sand beds filtering nutrients from shrimp (Penaeus monodon) culture ponds can transiently carry IHHNVLiu, Siyi, Rao, Min, Cowley, Jeff A., Morgan, Jess A.T., Barnes, Andrew C. and Palmer, Paul J. (2020). Polychaetes (Perinereis helleri) reared in sand beds filtering nutrients from shrimp (Penaeus monodon) culture ponds can transiently carry IHHNV. Aquaculture, 528 735560, 735560. doi: 10.1016/j.aquaculture.2020.735560 |
|
2020 Journal Article Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapesRudenko, Oleksandra, Engelstädter, Jan and Barnes, Andrew C. (2020). Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapes. Infection, Genetics and Evolution, 85 104435, 104435. doi: 10.1016/j.meegid.2020.104435 |
|
2019 Journal Article Effect of dietary replacement of fishmeal with spent brewer’s yeast on growth performance of Asian seabass (Lates calcarifer) in Cambodia coastal aquacultureSorphea, Sen, Lundh, Torbjörn, Lindberg, Jan Erik, Da, Chau Thi, Barnes, Andrew C. and Kiessling, Anders (2019). Effect of dietary replacement of fishmeal with spent brewer’s yeast on growth performance of Asian seabass (Lates calcarifer) in Cambodia coastal aquaculture. Livestock Research for Rural Development, 31 (9), 1-5. |
|
2019 Journal Article Leucocyte integrins, but neither caspases nor NLR inflammasome are associated with lipopolysaccharide recognition and response in barramundi (Lates calcarifer)Zoccola, Emmanuelle, Kellie, Stuart and Barnes, Andrew C. (2019). Leucocyte integrins, but neither caspases nor NLR inflammasome are associated with lipopolysaccharide recognition and response in barramundi (Lates calcarifer). Fish & Shellfish Immunology, 91, 172-179. doi: 10.1016/j.fsi.2019.05.015 |
|
2019 Journal Article Mixed culture purple phototrophic bacteria is an effective fishmeal replacement in aquacultureDelamare-Deboutteville, Jérôme, Batstone, Damien J., Kawasaki, Minami, Stegman, Samuel, Salini, Michael, Tabrett, Simon, Smullen, Richard, Barnes, Andrew C. and Hülsen, Tim (2019). Mixed culture purple phototrophic bacteria is an effective fishmeal replacement in aquaculture. Water Research X, 4 100031, 100031. doi: 10.1016/j.wroa.2019.100031 |
|
2019 Journal Article Interactions of head-kidney leucocytes from giant grouper, Epinephelus lanceolatus, with pathogenic Streptococcus agalactiae strains from marine and terrestrial originsDelamare-Deboutteville, Jérôme, Kawasaki, Minami, Zoccola, Emmanuelle, Heath, Candice M., Bowater, Rachel O. and Barnes, Andrew C. (2019). Interactions of head-kidney leucocytes from giant grouper, Epinephelus lanceolatus, with pathogenic Streptococcus agalactiae strains from marine and terrestrial origins. Fish and Shellfish Immunology, 90, 250-263. doi: 10.1016/j.fsi.2019.04.058 |
|
2019 Journal Article Growth performance of fry and fingerling Asian Seabass (Lates calcarifer) from Cambodian brood stock reared at different salinitiesSorphea, Sen, Terai, Atsumu, Sreyrum, Pean, Lundh, Torbjörn, Barnes, Andrew C., Da, Chau Thi and Kiessling, Anders (2019). Growth performance of fry and fingerling Asian Seabass (Lates calcarifer) from Cambodian brood stock reared at different salinities. Livestock Research for Rural Development, 31 (3). |
|
2019 Journal Article Antibiotic Use by Small-Scale Farmers for Freshwater Aquaculture in the Upper Mekong Delta, VietnamStröm, Gunilla Hallenberg, Björklund, Hanna, Barnes, Andrew C., Da, Chau Thi, Nhi, Nguyen Huu Yen, Lan, Trinh Thi, Magnusson, Ulf, Norman Haldén, Anna and Boqvist, Sofia (2019). Antibiotic Use by Small-Scale Farmers for Freshwater Aquaculture in the Upper Mekong Delta, Vietnam. Journal of Aquatic Animal Health, 31 (3), 290-298. doi: 10.1002/aah.10084 |
|
2019 Journal Article Prevalence of six amoeba species colonising the gills of farmed Atlantic salmon with amoebic gill disease (AGD) using qPCREnglish, Chloe J., Swords, Fiona, Downes, Jamie K., Ruane, Neil M., Botwright, Natasha A., Taylor, Richard S., Barnes, Andrew C., Wynne, James W., Lima, Paula C. and Cook, Mathew T. (2019). Prevalence of six amoeba species colonising the gills of farmed Atlantic salmon with amoebic gill disease (AGD) using qPCR. Aquaculture Environment Interactions, 11, 405-415. doi: 10.3354/aei00325 |
|
2018 Journal Article A diversity of amoebae colonise the gills of farmed Atlantic salmon (Salmo salar) with amoebic gill disease (AGD)English, Chloe J., Tyml, Tomáš, Botwright, Natasha A., Barnes, Andrew C., Wynne, James W., Lima, Paula C. and Cook, Mathew T. (2018). A diversity of amoebae colonise the gills of farmed Atlantic salmon (Salmo salar) with amoebic gill disease (AGD). European Journal of Protistology, 67, 27-45. doi: 10.1016/j.ejop.2018.10.003 |
|
2018 Journal Article A field survey of small scale cage and pond farming of asian seabass (Lates calcarifer) in CambodiaSorphea, Sen, Kiessling, Anders, Barnes, Andrew C., Da, Chau Thi, Lindberg, Jan Erik and Lundh, Torbjörn (2018). A field survey of small scale cage and pond farming of asian seabass (Lates calcarifer) in Cambodia. Livestock Research for Rural Development, 30 (7). |
|
2018 Journal Article Microevolution of aquatic Streptococcus agalactiae ST-261 from Australia indicates dissemination via imported tilapia and ongoing adaptation to marine hosts or environmentKawasaki, Minami, Delamare-Deboutteville, Jerome, Bowater, Rachel O, Walker, Mark J., Beatson, Scott, Ben Zakour, Nouri L. and Barnes, Andrew C. (2018). Microevolution of aquatic Streptococcus agalactiae ST-261 from Australia indicates dissemination via imported tilapia and ongoing adaptation to marine hosts or environment. Applied and Environmental Microbiology, 84 (16) e00859-18, AEM.00859-18. doi: 10.1128/aem.00859-18 |
|
2018 Journal Article Multi-Locus Variable number of tandem repeat Analysis (MLVA) of Yersinia ruckeri confirms the existence of host-specificity, geographic endemism and anthropogenic dissemination of virulent clonesGulla, Snorre, Barnes, Andrew C., Welch, Timothy J., Romalde, Jesús L., Ryder, David, Ormsby, Michael J., Carson, Jeremy, Lagesen, Karin, Verner-Jeffreys, David W., Davies, Robert L and Colquhoun, Duncan J (2018). Multi-Locus Variable number of tandem repeat Analysis (MLVA) of Yersinia ruckeri confirms the existence of host-specificity, geographic endemism and anthropogenic dissemination of virulent clones. Applied and Environmental Microbiology, 84 (16) e00730-18, AEM.00730-18. doi: 10.1128/AEM.00730-18 |
|
2018 Journal Article Epizootics of Streptococcus agalactiae infection in captive rays from Queensland, AustraliaBowater, R. O., Dennis, M. M., Blyde, D., Stone, B., Barnes, A. C., Delamare-Deboutteville, J., Horton, M. A., White, M., Condon, K. and Jones, R. (2018). Epizootics of Streptococcus agalactiae infection in captive rays from Queensland, Australia. Journal of Fish Diseases, 41 (2), 223-232. doi: 10.1111/jfd.12701 |
|
2017 Journal Article Gibson Assembly facilitates bacterial allelic exchange mutagenesisRudenko, Oleksandra and Barnes, Andrew C. (2017). Gibson Assembly facilitates bacterial allelic exchange mutagenesis. Journal of Microbiological Methods, 144, 157-163. doi: 10.1016/j.mimet.2017.11.023 |
|
2017 Journal Article Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer)Zoccola, Emmanuelle, Kellie, Stuart and Barnes, Andrew C. (2017). Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Molecular Immunology, 83, 33-45. doi: 10.1016/j.molimm.2017.01.010 |
|
2016 Journal Article Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent evolution under host selectionBarnes, Andrew C., Delamare-Deboutteville, Jerome, Gudkovs, Nicholas, Brosnahan, Cara, Morrison, Richard and Carson, Jeremy (2016). Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent evolution under host selection. Microbial Genomics, 2 (12) 000095, e000095. doi: 10.1099/mgen.0.000095 |
|
2016 Journal Article A reliable method for enrichment of neutrophils from peripheral blood in barramundi (Lates calcarifer)Masterman, Kelly-Anne and Barnes, Andrew C. (2016). A reliable method for enrichment of neutrophils from peripheral blood in barramundi (Lates calcarifer). Fish and Shellfish Immunology, 58, 174-176. doi: 10.1016/j.fsi.2016.09.028 |
