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2013 Journal Article Vancomycin: ligand recognition, dimerization and super-complex formationJia, ZhiGuang, O'Mara, Megan L., Zuegg, Johannes, Cooper, Matthew A. and Mark, Alan E. (2013). Vancomycin: ligand recognition, dimerization and super-complex formation. FEBS Journal, 280 (5), 1294-1307. doi: 10.1111/febs.12121 |
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2013 Journal Article Erratum: The effect of environment on the recognition and binding of vancomycin to native and resistant forms of lipid II (Biophysical Journal (2011) 101 (2684-2692))Jia, Z. G., O'Mara, M. L., Zuegg, J., Matthew Cooper and Mark, Alan (2013). Erratum: The effect of environment on the recognition and binding of vancomycin to native and resistant forms of lipid II (Biophysical Journal (2011) 101 (2684-2692)). Biophysical Journal, 104 (2), 516-516. doi: 10.1016/j.bpj.2012.12.031 |
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2012 Journal Article Intestinal peptidases form functional complexes with the neutral amino acid transporter B0AT1Fairweather, Stephen J., Broer, Angelika, O'Mara, Megan L. and Broer, Stefan (2012). Intestinal peptidases form functional complexes with the neutral amino acid transporter B0AT1. Biochemical Journal, 446 (1), 135-148. doi: 10.1042/BJ20120307 |
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2012 Journal Article Molecular dynamics simulations of membrane proteins: building starting structures and example applicationsSchmidt, Thomas H., O’Mara, Megan L. and Kandt, Christian (2012). Molecular dynamics simulations of membrane proteins: building starting structures and example applications. Current Physical Chemistry, 2 (4), 363-378. |
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2011 Journal Article The effect of environment on the recognition and binding of vancomycin to native and resistant forms of lipid IIJia, ZhiGuang, O'Mara, Megan L., Zuegg, Johannes, Cooper, Matthew A. and Mark, Alan E. (2011). The effect of environment on the recognition and binding of vancomycin to native and resistant forms of lipid II. Biophysical Journal, 101 (11), 2684-2692. doi: 10.1016/j.bpj.2011.10.047 |
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2011 Journal Article Orientation of mu-conotoxin PIIIA in a sodium channel vestibule, based on voltage dependence of its bindingMcArthur, J. R., Singh, G., O'Mara, M. L., McMaster, D., Ostroumov, V., Tieleman, D. P. and French, R. J. (2011). Orientation of mu-conotoxin PIIIA in a sodium channel vestibule, based on voltage dependence of its binding. Molecular Pharmacology, 80 (2), 219-227. doi: 10.1124/mol.111.071779 |
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2011 Journal Article Effect of poly(ethylene glycol) (PEG) spacers on the conformational properties of small peptides: A molecular dynamics studyXue, Ying, O'Mara, Megan L., Surawski, Peter P. T., Trau, Matt and Mark, Alan E. (2011). Effect of poly(ethylene glycol) (PEG) spacers on the conformational properties of small peptides: A molecular dynamics study. Langmuir, 27 (1), 296-303. doi: 10.1021/la103800h |
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2010 Journal Article Transmembrane helix 12 plays a pivotal role in coupling energy provision and drug binding in ABCB1Crowley, Emily, O'Mara, Megan L., Kerr, Ian D. and Callaghan, Richard (2010). Transmembrane helix 12 plays a pivotal role in coupling energy provision and drug binding in ABCB1. Febs Journal, 277 (19), 3974-3985. doi: 10.1111/j.1742-4658.2010.07789.x |
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2009 Journal Article ABC transporters: A riddle wrapped in a mystery inside an enigmaJones, Peter M., O'Mara, Megan L. and George, Anthony M. (2009). ABC transporters: A riddle wrapped in a mystery inside an enigma. Trends in Biochemical Sciences, 34 (10), 520-531. doi: 10.1016/j.tibs.2009.06.004 |
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2009 Journal Article Transmembrane helix 12 modulates progression of the ATP catalytic cycle in ABCB1Crowley, Emily, O'Mara, Megan L., Reynolds, Catherine, Tieleman, D. Peter, Storm, Janet, Kerr, Ian D. and Callaghan, Richard (2009). Transmembrane helix 12 modulates progression of the ATP catalytic cycle in ABCB1. Biochemistry, 48 (26), 6249-6258. doi: 10.1021/bi900373x |
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2009 Journal Article Structural arrangement of the transmission interface in the antigen ABC transport complex TAPOancea, Giani, O'Mara, Megan L., Bennett, W. F. Drew, Tieleman, D. Peter, Abele, Rupert and Tampé, Robert (2009). Structural arrangement of the transmission interface in the antigen ABC transport complex TAP. National Academy of Sciences. Proceedings, 106 (14), 5551-5556. doi: 10.1073/pnas.0811260106 |
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2009 Journal Article The mechanism of ABC transporters: general lessons from structural and functional studies of an antigenic peptide transporterProcko, Erik, O'Mara, Megan L., Bennett, W. F. Drew, Tieleman, D. Peter and Gaudet, Rachelle (2009). The mechanism of ABC transporters: general lessons from structural and functional studies of an antigenic peptide transporter. FASEB Journal, 23 (5), 1287-1302. doi: 10.1096/fj.08-121855 |
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2008 Journal Article Non-linear intramolecular interactions and voltage sensitivity of a KV1 family potassium channel from Polyorchis penicillatus (Eschscholtz 1829)Klassen, Tara L., O'Mara, Megan L., Redstone, Megan, Spencer, Andrew N. and Gallin, Warren J. (2008). Non-linear intramolecular interactions and voltage sensitivity of a KV1 family potassium channel from Polyorchis penicillatus (Eschscholtz 1829). Journal of Experimental Biology, 211 (21), 3442-3453. doi: 10.1242/jeb.022608 |
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2008 Journal Article ATP-binding cassette transporters in Escherichia coliMoussatova, Anastassiia, Kandt, Christian, O'Mara, Megan L. and Tieleman, D. Peter (2008). ATP-binding cassette transporters in Escherichia coli. BBA: Biomembranes, 1778 (9), 1757-1771. doi: 10.1016/j.bbamem.2008.06.009 |
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2008 Journal Article Cytosolic region of TM6 in P-Glycoprotein: Topographical analysis and functional perturbation by site directed labelingStorm, Janet, Modok, Szabolcs, O’Mara, Megan L., Tieleman, D. Peter, Kerr, Ian D. and Callaghan, Richard (2008). Cytosolic region of TM6 in P-Glycoprotein: Topographical analysis and functional perturbation by site directed labeling. Biochemistry, 47 (12), 3615-3624. doi: 10.1021/bi7023089 |
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2008 Journal Article Structure-based interpretation of the mutagenesis database for the nucleotide binding domains of P-glycoproteinLawson, J., O'Mara, M. L. and Kerr, I. D. (2008). Structure-based interpretation of the mutagenesis database for the nucleotide binding domains of P-glycoprotein. BBA: Biomembranes, 1778 (2), 376-391. doi: 10.1016/j.bbamem.2007.10.021 |
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2007 Journal Article Residue G346 in transmembrane segment six is involved in inter-domain communication in P-GlycoproteinStorm, Janet, O’Mara, Megan L., Crowley, Emily H., Peall, Jonathan, Tieleman, D. Peter, Kerr, Ian D. and Callaghan, Richard (2007). Residue G346 in transmembrane segment six is involved in inter-domain communication in P-Glycoprotein. Biochemistry, 46 (35), 9899-9910. doi: 10.1021/bi700447p |
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2007 Journal Article P-glycoprotein models of the apo and ATP-bound states based on homology with Sav1866 and MalKO'Mara, Megan L. and Tieleman, D. Peter (2007). P-glycoprotein models of the apo and ATP-bound states based on homology with Sav1866 and MalK. FEBS Letters, 581 (22), 4217-4222. doi: 10.1016/j.febslet.2007.07.069 |
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2006 Journal Article Mechanism and putative structure of B0-like neutral amino acid transportersO’Mara, M., Oakley, A. and Bröer, S. (2006). Mechanism and putative structure of B0-like neutral amino acid transporters. Journal of Membrane Biology, 213 (2), 111-118. doi: 10.1007/s00232-006-0879-3 |
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2005 Journal Article Homology model of the GABAA receptor examined using Brownian DynamicsO'Mara, Megan, Cromer, Brett, Parker, Michael and Chung, Shin-Ho (2005). Homology model of the GABAA receptor examined using Brownian Dynamics. Biophysical Journal, 88 (5), 3286-3299. doi: 10.1529/biophysj.104.051664 |
