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2021

Journal Article

Transcriptomic studies revealed pathophysiological impact of COVID-19 to predominant health conditions

Nain, Zulkar, Barman, Shital K, Sheam, Md Moinuddin, Syed, Shifath Bin, Samad, Abdus, Quinn, Julian M W, Karim, Mohammad Minnatul, Himel, Mahbubul Kabir, Roy, Rajib Kanti, Moni, Mohammad Ali and Biswas, Sudhangshu Kumar (2021). Transcriptomic studies revealed pathophysiological impact of COVID-19 to predominant health conditions. Briefings in Bioinformatics, 22 (6) bbab197. doi: 10.1093/bib/bbab197

Transcriptomic studies revealed pathophysiological impact of COVID-19 to predominant health conditions

2021

Journal Article

Public health utility of cause of death data: applying empirical algorithms to improve data quality

Johnson, Sarah Charlotte, Cunningham, Matthew, Dippenaar, Ilse N., Sharara, Fablina, Wool, Eve E., Agesa, Kareha M., Han, Chieh, Miller-Petrie, Molly K., Wilson, Shadrach, Fuller, John E., Balassyano, Shelly, Bertolacci, Gregory J., Davis Weaver, Nicole, Arabloo, Jalal, Badawi, Alaa, Bhagavathula, Akshaya Srikanth, Burkart, Katrin, Cámera, Luis Alberto, Carvalho, Felix, Castañeda-Orjuela, Carlos A., Choi, Jee-Young Jasmine, Chu, Dinh-Toi, Dai, Xiaochen, Dianatinasab, Mostafa, Emmons-Bell, Sophia, Fernandes, Eduarda, Fischer, Florian, Ghashghaee, Ahmad, Golechha, Mahaveer ... Naghavi, Mohsen (2021). Public health utility of cause of death data: applying empirical algorithms to improve data quality. BMC Medical Informatics and Decision Making, 21 (1) 175. doi: 10.1186/s12911-021-01501-1

Public health utility of cause of death data: applying empirical algorithms to improve data quality

2021

Journal Article

Subnational mapping of HIV incidence and mortality among individuals aged 15-49 years in sub-Saharan Africa, 2000-18: a modelling study

Sartorius, Benn, Van der Heide, John, Yang, Mingyou, Goosmann, Erik, Hon, Julia, Haeuser, Emily, Cork, Michael, Perkins, Samantha, Jahagirdar, Deepa, Schaeffer, Lauren, Serfes, Audrey, LeGrand, Kate, Abbastabar, Hedayat, Abebo, Zeleke, Abosetugn, Akine, Abu-Gharbieh, Eman, Accrombessi, Manfred, Adebayo, Oladimeji, Adegbosin, Adeyinka, Adekanmbi, Victor, Adetokunboh, Olatunji, Adeyinka, Daniel, Ahinkorah, Bright, Ahmadi, Keivan, Ahmed, Muktar, Akalu, Yonas, Akinyemi, Oluwaseun, Akinyemi, Rufus, Aklilu, Addis ... Dwyer-Lindgren, Laura (2021). Subnational mapping of HIV incidence and mortality among individuals aged 15-49 years in sub-Saharan Africa, 2000-18: a modelling study. The Lancet HIV, 8 (6), E363-E375.

Subnational mapping of HIV incidence and mortality among individuals aged 15-49 years in sub-Saharan Africa, 2000-18: a modelling study

2021

Journal Article

COVID-19 patient transcriptomic and genomic profiling reveals comorbidity interactions with psychiatric disorders

Moni, Mohammad Ali, Lin, Ping-I, Quinn, Julian M. W. and Eapen, Valsamma (2021). COVID-19 patient transcriptomic and genomic profiling reveals comorbidity interactions with psychiatric disorders. Translational Psychiatry, 11 (1) 160, 1-13. doi: 10.1038/s41398-020-01151-3

COVID-19 patient transcriptomic and genomic profiling reveals comorbidity interactions with psychiatric disorders

2021

Journal Article

Healthcare seeking behavior and glycemic control in patients with type 2 diabetes attending a tertiary hospital

Islam, Sheikh Mohammed Shariful, Uddin, Riaz, Zaman, Sojib Bin, Biswas, Tuhin, Tansi, Tania, Chegini, Zahra, Moni, Mohammad Ali, Niessen, Louis and Naheed, Aliya (2021). Healthcare seeking behavior and glycemic control in patients with type 2 diabetes attending a tertiary hospital. International Journal of Diabetes in Developing Countries, 41 (2), 280-287. doi: 10.1007/s13410-020-00875-8

Healthcare seeking behavior and glycemic control in patients with type 2 diabetes attending a tertiary hospital

2021

Journal Article

Lung cancer detection using enhanced segmentation accuracy

Akter, Onika, Moni, Mohammad Ali, Islam, Mohammad Mahfuzul, Quinn, Julian M. W. and Kamal, A. H.M. (2021). Lung cancer detection using enhanced segmentation accuracy. Applied Intelligence, 51 (6), 3391-3404. doi: 10.1007/s10489-020-02046-y

Lung cancer detection using enhanced segmentation accuracy

2021

Journal Article

Improved transfer-learning-based facial recognition framework to detect autistic children at an early stage

Akter, Tania, Ali, Mohammad Hanif, Khan, Md. Imran, Satu, Md. Shahriare, Uddin, Md. Jamal, Alyami, Salem A., Ali, Sarwar, Azad, AKM and Moni, Mohammad Ali (2021). Improved transfer-learning-based facial recognition framework to detect autistic children at an early stage. Brain Sciences, 11 (6) 734, 734. doi: 10.3390/brainsci11060734

Improved transfer-learning-based facial recognition framework to detect autistic children at an early stage

2021

Journal Article

Spatial, temporal, and demographic patterns in prevalence of chewing tobacco use in 204 countries and territories, 1990-2019: a systematic analysis from the Global Burden of Disease Study 2019

GBD 2019 Chewing Tobacco Collaborators, Wubishet, Befikadu Legesse, Mamun, Abdullah A. and Moni, Mohammad Ali (2021). Spatial, temporal, and demographic patterns in prevalence of chewing tobacco use in 204 countries and territories, 1990-2019: a systematic analysis from the Global Burden of Disease Study 2019. The Lancet Public health, 6 (7), e482-e499. doi: 10.1016/S2468-2667(21)00065-7

Spatial, temporal, and demographic patterns in prevalence of chewing tobacco use in 204 countries and territories, 1990-2019: a systematic analysis from the Global Burden of Disease Study 2019

2021

Journal Article

Identifying subgroups of patients with autism by gene expression profiles using machine learning algorithms

Lin, Ping-I, Moni, Mohammad Ali, Gau, Susan Shur-Fen and Eapen, Valsamma (2021). Identifying subgroups of patients with autism by gene expression profiles using machine learning algorithms. Frontiers in Psychiatry, 12 637022. doi: 10.3389/fpsyt.2021.637022

Identifying subgroups of patients with autism by gene expression profiles using machine learning algorithms

2021

Journal Article

Short-term prediction of COVID-19 cases using machine learning models

Satu, Md. Shahriare, Howlader, Koushik Chandra, Mahmud, Mufti, Kaiser, M. Shamim, Shariful Islam, Sheikh Mohammad, Quinn, Julian M. W., Alyami, Salem A. and Moni, Mohammad Ali (2021). Short-term prediction of COVID-19 cases using machine learning models. Applied Sciences, 11 (9) 4266, 4266. doi: 10.3390/app11094266

Short-term prediction of COVID-19 cases using machine learning models

2021

Journal Article

Diverse immunological factors influencing pathogenesis in patients with COVID-19: a review on viral dissemination, immunotherapeutic options to counter cytokine storm and inflammatory responses

Rabaan, Ali A., Al-Ahmed, Shamsah H., Garout, Mohammed A., Al-Qaaneh, Ayman M., Sule, Anupam A, Tirupathi, Raghavendra, Mutair, Abbas Al, Alhumaid, Saad, Hasan, Abdulkarim, Dhawan, Manish, Tiwari, Ruchi, Sharun, Khan, Mohapatra, Ranjan K., Mitra, Saikat, Emran, Talha Bin, Bilal, Muhammad, Singh, Rajendra, Alyami, Salem A., Moni, Mohammad Ali and Dhama, Kuldeep (2021). Diverse immunological factors influencing pathogenesis in patients with COVID-19: a review on viral dissemination, immunotherapeutic options to counter cytokine storm and inflammatory responses. Pathogens, 10 (5) 565, 565. doi: 10.3390/pathogens10050565

Diverse immunological factors influencing pathogenesis in patients with COVID-19: a review on viral dissemination, immunotherapeutic options to counter cytokine storm and inflammatory responses

2021

Journal Article

System biology and bioinformatics pipeline to identify comorbidities risk association: neurodegenerative disorder case study

Chowdhury, Utpala Nanda, Ahmad, Shamim, Islam, M. Babul, Alyami, Salem A., Quinn, Julian M. W., Eapen, Valsamma and Moni, Mohammad Ali (2021). System biology and bioinformatics pipeline to identify comorbidities risk association: neurodegenerative disorder case study. PLoS One, 16 (5) e0250660, e0250660. doi: 10.1371/journal.pone.0250660

System biology and bioinformatics pipeline to identify comorbidities risk association: neurodegenerative disorder case study

2021

Journal Article

Vulnerability in deep transfer learning models to adversarial fast gradient sign attack for covid-19 prediction from chest radiography images

Pal, Biprodip, Gupta, Debashis, Rashed-Al-mahfuz, Md., Alyami, Salem A. and Moni, Mohammad Ali (2021). Vulnerability in deep transfer learning models to adversarial fast gradient sign attack for covid-19 prediction from chest radiography images. Applied Sciences, 11 (9) 4233, 4233. doi: 10.3390/app11094233

Vulnerability in deep transfer learning models to adversarial fast gradient sign attack for covid-19 prediction from chest radiography images

2021

Journal Article

Development and analysis of surface plasmon resonance based refractive index sensor for pregnancy testing

Mitu, Sumaiya Akhtar, Ahmed, Kawsar, Zahrani, Fahad Ahmed Al, Grover, Amit, Mani Rajan, Murugan Senthil and Moni, Mohammad Ali (2021). Development and analysis of surface plasmon resonance based refractive index sensor for pregnancy testing. Optics and Lasers in Engineering, 140 106551, 1-10. doi: 10.1016/j.optlaseng.2021.106551

Development and analysis of surface plasmon resonance based refractive index sensor for pregnancy testing

2021

Journal Article

Integrative systems biology approaches to identify potential biomarkers and pathways of cervical cancer

Oany, Arafat Rahman, Mia, Mamun, Pervin, Tahmina, Alyami, Salem Ali and Moni, Mohammad Ali (2021). Integrative systems biology approaches to identify potential biomarkers and pathways of cervical cancer. Journal of Personalized Medicine, 11 (5) 363, 363. doi: 10.3390/jpm11050363

Integrative systems biology approaches to identify potential biomarkers and pathways of cervical cancer

2021

Journal Article

Role of inflammatory cytokines in COVID-19 patients: a review on molecular mechanisms, immune functions, immunopathology and immunomodulatory drugs to counter cytokine storm

Rabaan, Ali A., Al-Ahmed, Shamsah H., Muhammad, Javed, Khan, Amjad, Sule, Anupam A, Tirupathi, Raghavendra, Mutair, Abbas Al, Alhumaid, Saad, Al-Omari, Awad, Dhawan, Manish, Tiwari, Ruchi, Sharun, Khan, Mohapatra, Ranjan K., Mitra, Saikat, Bilal, Muhammad, Alyami, Salem A., Emran, Talha Bin, Moni, Mohammad Ali and Dhama, Kuldeep (2021). Role of inflammatory cytokines in COVID-19 patients: a review on molecular mechanisms, immune functions, immunopathology and immunomodulatory drugs to counter cytokine storm. Vaccines, 9 (5) 436, 436. doi: 10.3390/vaccines9050436

Role of inflammatory cytokines in COVID-19 patients: a review on molecular mechanisms, immune functions, immunopathology and immunomodulatory drugs to counter cytokine storm

2021

Journal Article

Machine learning approach to predicting COVID-19 disease severity based on clinical blood test data: Statistical analysis and model development

Aktar, Sakifa, Ahamad, Md Martuza, Rashed-Al-Mahfuz, Md, Azad, A. K.M., Uddin, Shahadat, Kamal, A. H.M., Alyami, Salem A., Lin, Ping-I., Islam, Sheikh Mohammed Shariful, Quinn, Julian M.W., Eapen, Valsamma and Moni, Mohammad Ali (2021). Machine learning approach to predicting COVID-19 disease severity based on clinical blood test data: Statistical analysis and model development. JMIR Medical Informatics, 9 (4) e25884, e25884. doi: 10.2196/25884

Machine learning approach to predicting COVID-19 disease severity based on clinical blood test data: Statistical analysis and model development

2021

Journal Article

A comparative analysis of active learning for biomedical text mining

Naseem, Usman, Khushi, Matloob, Khan, Shah Khalid, Shaukat, Kamran and Moni, Mohammad Ali (2021). A comparative analysis of active learning for biomedical text mining. Applied System Innovation, 4 (1) 23, 23. doi: 10.3390/asi4010023

A comparative analysis of active learning for biomedical text mining

2021

Journal Article

Hearing loss prevalence and years lived with disability, 1990-2019: findings from the Global Burden of Disease Study 2019

Haile, Lydia M., Kamenov, Kaloyan, Briant, Paul Svitil, Orji, Aislyn U., Steinmetz, Jaimie D., Abdoli, Amir, Abdollahi, Mohammad, Abu-Gharbieh, Eman, Afshin, Ashkan, Ahmed, Haroon, Rashid, Tarik Ahmed, Akalu, Yonas, Alahdab, Fares, Alanezi, Fahad Mashhour, Alanzi, Turki M., Al Hamad, Hanadi, Ali, Liaqat, Alipour, Vahid, Al-Raddadi, Rajaa M., Amu, Hubert, Arabloo, Jalal, Arab-Zozani, Morteza, Arulappan, Judie, Ashbaugh, Charlie, Atnafu, Desta Debalkie, Babar, Zaheer-Ud-Din, Baig, Atif Amin, Banik, Palash Chandra, Bärnighausen, Till Winfried ... Chadha, Shelly (2021). Hearing loss prevalence and years lived with disability, 1990-2019: findings from the Global Burden of Disease Study 2019. The Lancet, 397 (10278), 996-1009. doi: 10.1016/S0140-6736(21)00516-X

Hearing loss prevalence and years lived with disability, 1990-2019: findings from the Global Burden of Disease Study 2019

2021

Journal Article

PredNTS: improved and robust prediction of nitrotyrosine sites by integrating multiple sequence features

Nilamyani, Andi Nur, Auliah, Firda Nurul, Moni, Mohammad Ali, Shoombuatong, Watshara, Hasan, Md Mehedi and Kurata, Hiroyuki (2021). PredNTS: improved and robust prediction of nitrotyrosine sites by integrating multiple sequence features. International Journal of Molecular Sciences, 22 (5) 2704, 1-11. doi: 10.3390/ijms22052704

PredNTS: improved and robust prediction of nitrotyrosine sites by integrating multiple sequence features