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2021 Journal Article Identifying subgroups of patients with autism by gene expression profiles using machine learning algorithmsLin, Ping-I, Moni, Mohammad Ali, Gau, Susan Shur-Fen and Eapen, Valsamma (2021). Identifying subgroups of patients with autism by gene expression profiles using machine learning algorithms. Frontiers in Psychiatry, 12 637022. doi: 10.3389/fpsyt.2021.637022 |
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2021 Journal Article Short-term prediction of COVID-19 cases using machine learning modelsSatu, Md. Shahriare, Howlader, Koushik Chandra, Mahmud, Mufti, Kaiser, M. Shamim, Shariful Islam, Sheikh Mohammad, Quinn, Julian M. W., Alyami, Salem A. and Moni, Mohammad Ali (2021). Short-term prediction of COVID-19 cases using machine learning models. Applied Sciences, 11 (9) 4266, 4266. doi: 10.3390/app11094266 |
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2021 Journal Article Diverse immunological factors influencing pathogenesis in patients with COVID-19: a review on viral dissemination, immunotherapeutic options to counter cytokine storm and inflammatory responsesRabaan, Ali A., Al-Ahmed, Shamsah H., Garout, Mohammed A., Al-Qaaneh, Ayman M., Sule, Anupam A, Tirupathi, Raghavendra, Mutair, Abbas Al, Alhumaid, Saad, Hasan, Abdulkarim, Dhawan, Manish, Tiwari, Ruchi, Sharun, Khan, Mohapatra, Ranjan K., Mitra, Saikat, Emran, Talha Bin, Bilal, Muhammad, Singh, Rajendra, Alyami, Salem A., Moni, Mohammad Ali and Dhama, Kuldeep (2021). Diverse immunological factors influencing pathogenesis in patients with COVID-19: a review on viral dissemination, immunotherapeutic options to counter cytokine storm and inflammatory responses. Pathogens, 10 (5) 565, 565. doi: 10.3390/pathogens10050565 |
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2021 Journal Article System biology and bioinformatics pipeline to identify comorbidities risk association: neurodegenerative disorder case studyChowdhury, Utpala Nanda, Ahmad, Shamim, Islam, M. Babul, Alyami, Salem A., Quinn, Julian M. W., Eapen, Valsamma and Moni, Mohammad Ali (2021). System biology and bioinformatics pipeline to identify comorbidities risk association: neurodegenerative disorder case study. PLoS One, 16 (5) e0250660, e0250660. doi: 10.1371/journal.pone.0250660 |
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2021 Journal Article Development and analysis of surface plasmon resonance based refractive index sensor for pregnancy testingMitu, Sumaiya Akhtar, Ahmed, Kawsar, Zahrani, Fahad Ahmed Al, Grover, Amit, Mani Rajan, Murugan Senthil and Moni, Mohammad Ali (2021). Development and analysis of surface plasmon resonance based refractive index sensor for pregnancy testing. Optics and Lasers in Engineering, 140 106551, 1-10. doi: 10.1016/j.optlaseng.2021.106551 |
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2021 Journal Article Vulnerability in deep transfer learning models to adversarial fast gradient sign attack for covid-19 prediction from chest radiography imagesPal, Biprodip, Gupta, Debashis, Rashed-Al-mahfuz, Md., Alyami, Salem A. and Moni, Mohammad Ali (2021). Vulnerability in deep transfer learning models to adversarial fast gradient sign attack for covid-19 prediction from chest radiography images. Applied Sciences, 11 (9) 4233, 4233. doi: 10.3390/app11094233 |
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2021 Journal Article Integrative systems biology approaches to identify potential biomarkers and pathways of cervical cancerOany, Arafat Rahman, Mia, Mamun, Pervin, Tahmina, Alyami, Salem Ali and Moni, Mohammad Ali (2021). Integrative systems biology approaches to identify potential biomarkers and pathways of cervical cancer. Journal of Personalized Medicine, 11 (5) 363, 363. doi: 10.3390/jpm11050363 |
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2021 Journal Article Role of inflammatory cytokines in COVID-19 patients: a review on molecular mechanisms, immune functions, immunopathology and immunomodulatory drugs to counter cytokine stormRabaan, Ali A., Al-Ahmed, Shamsah H., Muhammad, Javed, Khan, Amjad, Sule, Anupam A, Tirupathi, Raghavendra, Mutair, Abbas Al, Alhumaid, Saad, Al-Omari, Awad, Dhawan, Manish, Tiwari, Ruchi, Sharun, Khan, Mohapatra, Ranjan K., Mitra, Saikat, Bilal, Muhammad, Alyami, Salem A., Emran, Talha Bin, Moni, Mohammad Ali and Dhama, Kuldeep (2021). Role of inflammatory cytokines in COVID-19 patients: a review on molecular mechanisms, immune functions, immunopathology and immunomodulatory drugs to counter cytokine storm. Vaccines, 9 (5) 436, 436. doi: 10.3390/vaccines9050436 |
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2021 Journal Article Machine learning approach to predicting COVID-19 disease severity based on clinical blood test data: Statistical analysis and model developmentAktar, Sakifa, Ahamad, Md Martuza, Rashed-Al-Mahfuz, Md, Azad, A. K.M., Uddin, Shahadat, Kamal, A. H.M., Alyami, Salem A., Lin, Ping-I., Islam, Sheikh Mohammed Shariful, Quinn, Julian M.W., Eapen, Valsamma and Moni, Mohammad Ali (2021). Machine learning approach to predicting COVID-19 disease severity based on clinical blood test data: Statistical analysis and model development. JMIR Medical Informatics, 9 (4) e25884, e25884. doi: 10.2196/25884 |
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2021 Journal Article A comparative analysis of active learning for biomedical text miningNaseem, Usman, Khushi, Matloob, Khan, Shah Khalid, Shaukat, Kamran and Moni, Mohammad Ali (2021). A comparative analysis of active learning for biomedical text mining. Applied System Innovation, 4 (1) 23, 23. doi: 10.3390/asi4010023 |
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2021 Journal Article Hearing loss prevalence and years lived with disability, 1990-2019: findings from the Global Burden of Disease Study 2019Haile, Lydia M., Kamenov, Kaloyan, Briant, Paul Svitil, Orji, Aislyn U., Steinmetz, Jaimie D., Abdoli, Amir, Abdollahi, Mohammad, Abu-Gharbieh, Eman, Afshin, Ashkan, Ahmed, Haroon, Rashid, Tarik Ahmed, Akalu, Yonas, Alahdab, Fares, Alanezi, Fahad Mashhour, Alanzi, Turki M., Al Hamad, Hanadi, Ali, Liaqat, Alipour, Vahid, Al-Raddadi, Rajaa M., Amu, Hubert, Arabloo, Jalal, Arab-Zozani, Morteza, Arulappan, Judie, Ashbaugh, Charlie, Atnafu, Desta Debalkie, Babar, Zaheer-Ud-Din, Baig, Atif Amin, Banik, Palash Chandra, Bärnighausen, Till Winfried ... Chadha, Shelly (2021). Hearing loss prevalence and years lived with disability, 1990-2019: findings from the Global Burden of Disease Study 2019. The Lancet, 397 (10278), 996-1009. doi: 10.1016/S0140-6736(21)00516-X |
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2021 Journal Article PredNTS: improved and robust prediction of nitrotyrosine sites by integrating multiple sequence featuresNilamyani, Andi Nur, Auliah, Firda Nurul, Moni, Mohammad Ali, Shoombuatong, Watshara, Hasan, Md Mehedi and Kurata, Hiroyuki (2021). PredNTS: improved and robust prediction of nitrotyrosine sites by integrating multiple sequence features. International Journal of Molecular Sciences, 22 (5) 2704, 1-11. doi: 10.3390/ijms22052704 |
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2021 Journal Article Use of electronic health data for disease prediction: a comprehensive literature reviewHossain, Md. Ekramul, Khan, Arif, Moni, Mohammad Ali and Uddin, Shahadat (2021). Use of electronic health data for disease prediction: a comprehensive literature review. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 18 (2) 8815739, 745-758. doi: 10.1109/tcbb.2019.2937862 |
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2021 Journal Article Pharmacoinformatics based elucidation and designing of potential inhibitors against Plasmodium falciparum to target importin α/β mediated nuclear importationOany, Arafat Rahman, Pervin, Tahmina and Moni, Mohammad Ali (2021). Pharmacoinformatics based elucidation and designing of potential inhibitors against Plasmodium falciparum to target importin α/β mediated nuclear importation. Infection, Genetics and Evolution, 88 104699, 104699. doi: 10.1016/j.meegid.2020.104699 |
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2021 Journal Article Network-based identification genetic effect of SARS-CoV-2 infections to Idiopathic pulmonary fibrosis (IPF) patientsTaz, Tasnimul Alam, Ahmed, Kawsar, Paul, Bikash Kumar, Kawsar, Md, Aktar, Nargis, Mahmud, S. M. Hasan and Moni, Mohammad Ali (2021). Network-based identification genetic effect of SARS-CoV-2 infections to Idiopathic pulmonary fibrosis (IPF) patients. Briefings in Bioinformatics, 22 (2), 1254-1266. doi: 10.1093/bib/bbaa235 |
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2021 Journal Article Diseasome and comorbidities complexities of SARS-CoV-2 infection with common malignant diseasesSatu, Shahriare, Khan, Imran, Rahman, Rezanur, Howlader, Koushik Chandra, Roy, Shatabdi, Roy, Shuvo Saha, Quinn, Julian M. W and Moni, Mohammad Ali (2021). Diseasome and comorbidities complexities of SARS-CoV-2 infection with common malignant diseases. Briefings in Bioinformatics, 22 (2), 1415-1429. doi: 10.1093/bib/bbab003 |
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2021 Journal Article Bioinformatics and system biology approach to identify the influences of COVID-19 on cardiovascular and hypertensive comorbiditiesNashiry, Asif, Sarmin Sumi, Shauli, Islam, Salequl, Quinn, Julian M. W and Moni, Mohammad Ali (2021). Bioinformatics and system biology approach to identify the influences of COVID-19 on cardiovascular and hypertensive comorbidities. Briefings in Bioinformatics, 22 (2), 1387-1401. doi: 10.1093/bib/bbaa426 |
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2021 Journal Article Identification of biomarkers and pathways for the SARS-CoV-2 infections that make complexities in pulmonary arterial hypertension patientsTaz, Tasnimul Alam, Ahmed, Kawsar, Paul, Bikash Kumar, Al-Zahrani, Fahad Ahmed, Mahmud, S M Hasan and Moni, Mohammad Ali (2021). Identification of biomarkers and pathways for the SARS-CoV-2 infections that make complexities in pulmonary arterial hypertension patients. Briefings in Bioinformatics, 22 (2), 1451-1465. doi: 10.1093/bib/bbab026 |
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2021 Journal Article Deep convolutional neural networks based ECG beats classification to diagnose cardiovascular conditionsRashed-Al-Mahfuz, Md., Moni, Mohammad Ali, Lio’, Pietro, Islam, Sheikh Mohammed Shariful, Berkovsky, Shlomo, Khushi, Matloob and Quinn, Julian M. W. (2021). Deep convolutional neural networks based ECG beats classification to diagnose cardiovascular conditions. Biomedical Engineering Letters, 11 (2), 147-162. doi: 10.1007/s13534-021-00185-w |
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2021 Journal Article Causes of blindness and vision impairment in 2020 and trends over 30 years, and prevalence of avoidable blindness in relation to VISION 2020: The Right to Sight: an analysis for the Global Burden of Disease StudyBourne, Rupert R.A., Steinmetz, Jaimie D., Saylan, Mete, Mersha, Abera M., Weldemariam, Abrha Hailay, Wondmeneh, Temesgen Gebeyehu, Sreeramareddy, Chandrashekhar T., Pinheiro, Marina, Yaseri, Mehdi, Yu, Chuanhua, Zastrozhin, Mikhail Sergeevich, Zastrozhina, Anasthasia, Zhang, Zhi-Jiang, Zimsen, Stephanie R.M., Yonemoto, Naohiro, Tsegaye, Gebiyaw Wudie, Vu, Giang Thu, Vongpradith, Avina, Renzaho, Andre M.N., Sorrie, Muluken Bekele, Shaheen, Amira A., Shiferaw, Wondimeneh Shibabaw, Skryabin, Valentin Yurievich, Skryabina, Anna Aleksandrovna, Saya, Ganesh Kumar, Rahimi-Movaghar, Vafa, Shigematsu, Mika, Sahraian, Mohammad Ali, Naderifar, Homa ... GBD 2019 Blindness and Vision Impairment Collaborators on behalf of the Vision Loss Expert Group of the Global Burden of Disease Study (2021). Causes of blindness and vision impairment in 2020 and trends over 30 years, and prevalence of avoidable blindness in relation to VISION 2020: The Right to Sight: an analysis for the Global Burden of Disease Study. The Lancet Global Health, 9 (2), e144-e160. doi: 10.1016/S2214-109X(20)30489-7 |
