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2024 Journal Article Misregulation of mitochondrial 6mA promotes the propagation of mutant mtDNA and causes aging in C. elegansHahn, Anne, Hung, Grace Ching Ching, Ahier, Arnaud, Dai, Chuan-Yang, Kirmes, Ina, Forde, Brian M., Campbell, Daniel, Lee, Rachel Shin Yie, Sucic, Josiah, Onraet, Tessa and Zuryn, Steven (2024). Misregulation of mitochondrial 6mA promotes the propagation of mutant mtDNA and causes aging in C. elegans. Cell Metabolism, 36 (12), 2528-2541.e11. doi: 10.1016/j.cmet.2024.07.020 |
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2024 Journal Article The future of immunology in Europe: Current trajectories for early-career researchersKulsvehagen, Laila, Hahn, Anne M., Nabhan, Myriam and Bechara, Rami (2024). The future of immunology in Europe: Current trajectories for early-career researchers. European Journal of Immunology, 54 (10) 2451208. doi: 10.1002/eji.202451208 |
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2024 Journal Article Genome-wide association study between SARS-CoV-2 single nucleotide polymorphisms and virus copies during infectionsLi, Ke, Chaguza, Chrispin, Stamp, Julian, Chew, Yi Ting, Chen, Nicholas F.G., Ferguson, David, Pandya, Sameer, Kerantzas, Nick, Schulz, Wade, Hahn, Anne M., Ogbunugafor, C. Brandon, Pitzer, Virginia E., Crawford, Lorin, Weinberger, Daniel M. and Grubaugh, Nathan D. (2024). Genome-wide association study between SARS-CoV-2 single nucleotide polymorphisms and virus copies during infections. PLoS Computational Biology, 20 (9) e1012469, e1012469. doi: 10.1371/journal.pcbi.1012469 |
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2024 Journal Article SARS-CoV-2-related bat viruses evade human intrinsic immunity but lack efficient transmission capacityPeña-Hernández, Mario A., Alfajaro, Mia Madel, Filler, Renata B., Moriyama, Miyu, Keeler, Emma L., Ranglin, Zara E., Kong, Yong, Mao, Tianyang, Menasche, Bridget L., Mankowski, Madeleine C., Zhao, Zhe, Vogels, Chantal B. F., Hahn, Anne M., Kalinich, Chaney C., Zhang, Shuo, Huston, Nicholas, Wan, Han, Araujo-Tavares, Rafael, Lindenbach, Brett D., Homer, Robert, Pyle, Anna Marie, Martinez, David R., Grubaugh, Nathan D., Israelow, Benjamin, Iwasaki, Akiko and Wilen, Craig B. (2024). SARS-CoV-2-related bat viruses evade human intrinsic immunity but lack efficient transmission capacity. Nature Microbiology, 9 (8), 2038-2050. doi: 10.1038/s41564-024-01765-z |
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2024 Journal Article Combining genomic data and infection estimates to characterize the complex dynamics of SARS-CoV-2 Omicron variants in the USLopes, Rafael, Pham, Kien, Klaassen, Fayette, Chitwood, Melanie H., Hahn, Anne M., Redmond, Seth, Swartwood, Nicole A., Salomon, Joshua A., Menzies, Nicolas A., Cohen, Ted and Grubaugh, Nathan D. (2024). Combining genomic data and infection estimates to characterize the complex dynamics of SARS-CoV-2 Omicron variants in the US. Cell Reports, 43 (7) 114451, 114451. doi: 10.1016/j.celrep.2024.114451 |
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2024 Journal Article Persistent SARS-CoV-2 infection: significance and implicationsMachkovech, Heather M, Hahn, Anne M, Garonzik Wang, Jacqueline, Grubaugh, Nathan D, Halfmann, Peter J, Johnson, Marc C, Lemieux, Jacob E, O'Connor, David H, Piantadosi, Anne, Wei, Wanting and Friedrich, Thomas C (2024). Persistent SARS-CoV-2 infection: significance and implications. The Lancet Infectious Diseases, 24 (7), e453-e462. doi: 10.1016/S1473-3099(23)00815-0 |
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2023 Journal Article Young EFIS: Three years of progress – Reflecting on achievements and embracing new horizonsGlymenaki, Maria, Hahn, Anne M., Hausmann, Annika, Kempkes, Rosalie W.M., Kilic, Gizem, Kulsvehagen, Laila, Mooslechner, Agnes A., Mossadegh-Keller, Noushin, Nabhan, Myriam and Bechara, Rami (2023). Young EFIS: Three years of progress – Reflecting on achievements and embracing new horizons. European Journal of Immunology, 53 (12) 2350749, 1-5. doi: 10.1002/eji.202350749 |
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2023 Journal Article Genome sequence of a recombinant SARS-CoV-2 lineage XAM (BA.1.1/BA.2.9) strain from a clinical sample in Santo Domingo, Dominican RepublicPaulino-Ramírez, Robert, Pham, Kien, Breban, Mallery I., Peguero, Armando, Jabier, Maridania, Sánchez, Nelissa, Eustate, Iscania, Ruiz, Ingrid, Grubaugh, Nathan D. and Hahn, Anne M. (2023). Genome sequence of a recombinant SARS-CoV-2 lineage XAM (BA.1.1/BA.2.9) strain from a clinical sample in Santo Domingo, Dominican Republic. Microbiology Resource Announcements, 12 (1), 1-4. doi: 10.1128/mra.01113-22 |
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2023 Journal Article The potential of saliva as an accessible and sensitive sample type for the detection of respiratory pathogens and host immunityLaxton, Claire S., Peno, Chikondi, Hahn, Anne M., Allicock, Orchid M., Perniciaro, Stephanie and Wyllie, Anne L. (2023). The potential of saliva as an accessible and sensitive sample type for the detection of respiratory pathogens and host immunity. The Lancet Microbe, 4 (10), e837-e850. doi: 10.1016/S2666-5247(23)00135-0 |
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2023 Journal Article High-fat-diet-associated intestinal microbiota exacerbates psoriasis-like inflammation by enhancing systemic γδ T cell IL-17 productionSonomoto, Koshiro, Song, Rui, Eriksson, Daniel, Hahn, Anne M., Meng, Xianyi, Lyu, Pang, Cao, Shan, Liu, Ning, Taudte, R. Verena, Wirtz, Stefan, Tanaka, Yoshiya, Winkler, Thomas H., Schett, Georg, Soulat, Didier and Bozec, Aline (2023). High-fat-diet-associated intestinal microbiota exacerbates psoriasis-like inflammation by enhancing systemic γδ T cell IL-17 production. Cell Reports, 42 (7) 112713, 1-20. doi: 10.1016/j.celrep.2023.112713 |
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2023 Journal Article ATFS-1 counteracts mitochondrial DNA damage by promoting repair over transcriptionDai, Chuan-Yang, Ng, Chai Chee, Hung, Grace Ching Ching, Kirmes, Ina, Hughes, Laetitia A., Du, Yunguang, Brosnan, Christopher A., Ahier, Arnaud, Hahn, Anne, Haynes, Cole M., Rackham, Oliver, Filipovska, Aleksandra and Zuryn, Steven (2023). ATFS-1 counteracts mitochondrial DNA damage by promoting repair over transcription. Nature Cell Biology, 25 (8), 1-10. doi: 10.1038/s41556-023-01192-y |
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2023 Journal Article Erratum: A monoclonal Trd chain supports the development of the complete set of functional γδ T cell lineages (Cell Reports (2023) 42(3), (S2211124723002644), (10.1016/j.celrep.2023.112253))Hahn, Anne M., Vogg, Lisa, Brey, Stefanie, Schneider, Andrea, Schäfer, Simon, Palmisano, Ralph, Pavlova, Anna, Sandrock, Inga, Tan, Likai, Fichtner, Alina S., Prinz, Immo, Ravens, Sarina and Winkler, Thomas H. (2023). Erratum: A monoclonal Trd chain supports the development of the complete set of functional γδ T cell lineages (Cell Reports (2023) 42(3), (S2211124723002644), (10.1016/j.celrep.2023.112253)). Cell Reports, 42 (5) 112558. doi: 10.1016/j.celrep.2023.112558 |
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2023 Journal Article Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infectionChaguza, Chrispin, Hahn, Anne M., Petrone, Mary E., Zhou, Shuntai, Ferguson, David, Breban, Mallery I., Pham, Kien, Peña-Hernández, Mario A., Castaldi, Christopher, Hill, Verity, Billig, Kendall, Earnest, Rebecca, Fauver, Joseph R., Kalinch, Chaney C., Kerantzas, Nicholas, Koch, Tobias R., De Kumar, Bony, Landry, Marie L., Ott, Isabel M., Peaper, David, Tikhonova, Irina R., Vogels, Chantal B.F., Schulz, Wade, Swanstrom, Ronald I., Roberts, Scott C. and Grubaugh, Nathan D. (2023). Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection. Cell Reports Medicine, 4 (2) 100943, 1-16. doi: 10.1016/j.xcrm.2023.100943 |
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2023 Journal Article Age-dependent impairment in antibody responses elicited by a homologous CoronaVac booster doseFilardi, Bruno Andraus, Monteiro, Valter Silva, Schwartzmann, Pedro Vellosa, Martins, Vivian do Prado, Zucca, Luis Eduardo Rosa, Baiocchi, Gabriela Crispim, Malik, Amyn A., Silva, Julio, Hahn, Anne M., Chen, Nicholas F.G., Pham, Kien, Pérez-Then, Eddy, Miric, Marija, Brache, Vivian, Cochon, Leila, Larocca, Rafael A., Mendez, Roberto Della Rosa, Silveira, Douglas Bardini, Pinto, Aguinaldo Roberto, Croda, Julio, Yildirim, Inci, Omer, Saad B., Ko, Albert I., Vermund, Sten H., Grubaugh, Nathan D., Iwasaki, Akiko and Lucas, Carolina (2023). Age-dependent impairment in antibody responses elicited by a homologous CoronaVac booster dose. Science Translational Medicine, 15 (683) eade6023, 1-9. doi: 10.1126/scitranslmed.ade6023 |
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2022 Journal Article Heterotypic vaccination responses against SARS-CoV-2 Omicron BA.2Fang, Zhenhao, Peng, Lei, Lucas, Carolina, Lin, Qianqian, Zhou, Liqun, Yang, Luojia, Feng, Yanzhi, Ren, Ping, Renauer, Paul A., Monteiro, Valter S., Hahn, Anne M., Park, Jonathan J., Zhou, Xiaoyu, Billig, Kendall, Breban, Mallery I., Castaldi, Christopher, Chaguza, Chrispin, Chen, Nicholas, Ferguson, David, Kerantzas, Nicholas, Koch, Tobias R., De Kumar, Bony, Landry, Marie L., Peaper, David, Pham, Kien, Schulz, Wade, Tikhonova, Irina R., Vogels, Chantal B. F., Grubaugh, Nathan D. ... Chen, Sidi (2022). Heterotypic vaccination responses against SARS-CoV-2 Omicron BA.2. Cell Discovery, 8 (1) 69. doi: 10.1038/s41421-022-00435-w |
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2022 Journal Article Bivalent mRNA vaccine booster induces robust antibody immunity against Omicron lineages BA.2, BA.2.12.1, BA.2.75 and BA.5Fang, Zhenhao, Monteiro, Valter S., Hahn, Anne M., Grubaugh, Nathan D., Lucas, Carolina and Chen, Sidi (2022). Bivalent mRNA vaccine booster induces robust antibody immunity against Omicron lineages BA.2, BA.2.12.1, BA.2.75 and BA.5. Cell Discovery, 8 (1) 108. doi: 10.1038/s41421-022-00473-4 |
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2022 Journal Article Daily rapid antigen exit testing to tailor university COVID-19 isolation policyEarnest, Rebecca, Chen, Christine, Chaguza, Chrispin, Hahn, Anne M., Grubaugh, Nathan D., Wilson, Madeline S., Cairns, Adam, Cooksey, Alyssa, Pensiero, Arielle, Mosha, Asnath, Pivirotto, Christina, Traub, Colleen, Velazquez, Gabriel, Lee, Heejun, Larioza, Jasper, Neal, Jelissa, Bourgeois, Jenna, Donnelly, Kathleen, Otterson, Karen, Carbone, Kiley, Smith, Kristin, Gillingham, Lauren, Greenberg, Lauren, Di Gangi Ehrenfels, Linda, Adileh, Maen, Toupou, Marie, Lubich, Nathan, Yuen, Nathan, Davies, Nick ... Cappuccia, Vittoria (2022). Daily rapid antigen exit testing to tailor university COVID-19 isolation policy. Emerging Infectious Diseases, 28 (12), 2455-2462. doi: 10.3201/eid2812.220969 |
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2022 Journal Article Partial ORF1ab gene target failure with Omicron BA.2.12.1Rodino, Kyle G., Peaper, David R., Kelly, Brendan J., Bushman, Frederic, Marques, Andrew, Adhikari, Hriju, Tu, Zheng Jin, Rolon, Rebecca Marrero, Westblade, Lars F., Green, Daniel A., Berry, Gregory J., Wu, Fann, Annavajhala, Medini K., Uhlemann, Anne-Catrin, Parikh, Bijal A., McMillen, Tracy, Jani, Krupa, Esther Babady, N., Hahn, Anne M., Koch, Robert T., Grubaugh, Nathan D., Rhoads, Daniel D., Billig, Kendall, Breban, Mallery, Vogels, Chantal, Pham, Kien, Chen, Nicholas, Chaguza, Chrispin, Tikhonova, Irina ... Schulz, Wade (2022). Partial ORF1ab gene target failure with Omicron BA.2.12.1. Journal of Clinical Microbiology, 60 (6), 1-11. doi: 10.1128/jcm.00600-22 |
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2022 Journal Article Rapid emergence of SARS-CoV-2 Omicron variant is associated with an infection advantage over Delta in vaccinated personsChaguza, Chrispin, Coppi, Andreas, Earnest, Rebecca, Ferguson, David, Kerantzas, Nicholas, Warner, Frederick, Young, H. Patrick, Breban, Mallery I., Billig, Kendall, Koch, Robert Tobias, Pham, Kien, Kalinich, Chaney C., Ott, Isabel M., Fauver, Joseph R., Hahn, Anne M., Tikhonova, Irina R., Castaldi, Christopher, De Kumar, Bony, Pettker, Christian M., Warren, Joshua L., Weinberger, Daniel M., Landry, Marie L., Peaper, David R., Schulz, Wade, Vogels, Chantal B.F. and Grubaugh, Nathan D. (2022). Rapid emergence of SARS-CoV-2 Omicron variant is associated with an infection advantage over Delta in vaccinated persons. Med, 3 (5), 325-334.e4. doi: 10.1016/j.medj.2022.03.010 |
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2022 Other Outputs Unravelling epigenetic modifiers of mitochondrial DNAHahn, Anne (2022). Unravelling epigenetic modifiers of mitochondrial DNA. PhD Thesis, Queensland Brain Institute, The University of Queensland. doi: 10.14264/435d235 |
