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2015 Journal Article Structural characterization of nanoyeast single-chain fragment variable affinity reagentsGrewal, Yadveer S., Shiddiky, Muhammad J. A., Spadafora, Lauren J., Cangelosi, Gerard A. and Trau, Matt (2015). Structural characterization of nanoyeast single-chain fragment variable affinity reagents. The Journal of Physical Chemistry Part C: Nanomaterials, Interfaces and Hard Matter, 119 (22), 12674-12680. doi: 10.1021/acs.jpcc.5b01234 |
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2015 Conference Publication Towards rapid and cost-effective point-of-care detection of TMPRSS2:ERG fusion transcripts in urine via a novel methodologyWee, Eugene J.H., Koo, Kevin M., Mainwaring, Paul N. and Trau, Mattias (2015). Towards rapid and cost-effective point-of-care detection of TMPRSS2:ERG fusion transcripts in urine via a novel methodology. 2015 ASCO Annual Meeting, Chicago, IL United States, 29 May - 2 June 2015. Alexandria, VA United States: American Society of Clinical Oncology. doi: 10.1200/jco.2015.33.15_suppl.11063 |
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2015 Conference Publication Multi-platform quality assurance (QA) comparison of next-generation sequencing (NGS) technologies incorporating novel simultaneous mutation and copy number variation (CNV) reportingMainwaring, Paul N., Pyke, Christopher, Korbie, Darren, Pheasant, Michael, Gascoigne, Dennis, Musgrave, Ken, O'Neill, Kate, McGrath, Kelly and Trau, Mattias (2015). Multi-platform quality assurance (QA) comparison of next-generation sequencing (NGS) technologies incorporating novel simultaneous mutation and copy number variation (CNV) reporting. 2015 ASCO Annual Meeting, Chicago, IL United States, 29 May - 2 June 2015. Alexandria, VA United States: American Society of Clinical Oncology. doi: 10.1200/jco.2015.33.15_suppl.e22126 |
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2015 Journal Article A multiplexed device based on tunable nanoshearing for specific detection of multiple protein biomarkers in serumVaidyanathan, Ramanathan, van Leeuwen, Lara Michelle, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2015). A multiplexed device based on tunable nanoshearing for specific detection of multiple protein biomarkers in serum. Scientific Reports, 5 (1) 9756, 9756.1-9756.7. doi: 10.1038/srep09756 |
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2015 Journal Article PARTICLE, a triplex-forming long ncRNA, regulates locus-specific methylation in response to low-dose irradiationO'Leary, Valerie Brid, Ovsepian, Saak Victor, Carrascosa, Laura Garcia, Buske, Fabian Andreas, Radulovic, Vanja, Niyazi, Maximilian, Moertl, Simone, Trau, Matt and Atkinson, Michael John (2015). PARTICLE, a triplex-forming long ncRNA, regulates locus-specific methylation in response to low-dose irradiation. Cell Reports, 11 (3), 474-485. doi: 10.1016/j.celrep.2015.03.043 |
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2015 Journal Article Multiplex bisulfite PCR resequencing of clinical FFPE DNAKorbie, Darren, Lin, Erica, Wall, David, Nair, Shalima S., Stirzaker, Clare, Clark, Sue J. and Trau, Matt (2015). Multiplex bisulfite PCR resequencing of clinical FFPE DNA. Clinical Epigenetics, 7 (28) 28, 1-11. doi: 10.1186/s13148-015-0067-3 |
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2015 Journal Article Methylome sequencing in triple negative breast cancer reveals distinct methylation clusters with prognostic valueStirzaker, Clare, Zotenko, Elena, Song, Jenny Z., Qu, Wenja, Nair, Shalima, Locke, Warwick J., Stone, Andrew Stone, Armstrong, Nicola J., Robinson, Mark D., Dobrovic, Alexander, Avery-Kiejda, Kelly A., Peters, Kate M., French, Juliet D., Stein, Sandra, Korbie, Darren J., Trau, Matt, Forbes, John F., Scott, Rodney J., Brown, Melissa A., Francis, Glenn D. and Clark, Susan J. (2015). Methylome sequencing in triple negative breast cancer reveals distinct methylation clusters with prognostic value. Nature Communications, 6 (5899) 5899, 1-11. doi: 10.1038/ncomms6899 |
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2015 Journal Article Re-purposing bridging flocculation for on-site, rapid, qualitative DNA detection in resource-poor settingsWee, E. J. H., Lau, H. Y., Botella, J. and Trau, M. (2015). Re-purposing bridging flocculation for on-site, rapid, qualitative DNA detection in resource-poor settings. Chemical Communications, 51 (27), 5828-5831. doi: 10.1039/C4CC10068A |
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2015 Journal Article Analysis of exosome purification methods using a model liposome system and tunable-resistive pulse sensingLane, Rebecca E., Korbie, Darren, Anderson, Will, Vaidyanathan, Ramanathan and Trau, Matt (2015). Analysis of exosome purification methods using a model liposome system and tunable-resistive pulse sensing. Scientific Reports, 5 (1) 7639, 7639.1-7639.7. doi: 10.1038/srep07639 |
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2015 Conference Publication Enabling rapid and specific SERS immunoassay using nano-scaled surface shear forcesVaidyanathan, Ramanathan, Wang, Yuling, Shiddiky, Muhammad J. A. and Trau, Matt (2015). Enabling rapid and specific SERS immunoassay using nano-scaled surface shear forces. 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences, Gyeongju, Korea, 25-29 October 2015. Washington, DC USA: Chemical and Biological Microsystems Society. |
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2015 Conference Publication Towards rapid and cost-effective point-of-care detection of TMPRSS2:ERG fusion transcripts in urine via a novel methodologyWee, Eugene J. H., Koo, Kevin M., Mainwaring, Paul N. and Trau, Mattias (2015). Towards rapid and cost-effective point-of-care detection of TMPRSS2:ERG fusion transcripts in urine via a novel methodology. Annual Meeting of the American Society of Clinical Oncology (ASCO), Chicago, IL United States, 29 May-02 June 2015. Alexandria, VA United States: American Society of Clinical Oncology. |
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2015 Journal Article Highly sensitive DNA methylation analysis at CpG resolution by surface-enhanced Raman scattering via ligase chain reactionWang, Yuling, Wee, Eugene J. H. and Trau, Matt (2015). Highly sensitive DNA methylation analysis at CpG resolution by surface-enhanced Raman scattering via ligase chain reaction. Chemical Communications, 51 (54), 10953-10956. doi: 10.1039/c5cc03921e |
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2014 Journal Article Tuneable surface shear forces to physically displace nonspecific molecules in protein biomarker detectionVaidyanathan, Ramanathan, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2014). Tuneable surface shear forces to physically displace nonspecific molecules in protein biomarker detection. Biosensors and Bioelectronics, 61, 184-191. doi: 10.1016/j.bios.2014.03.061 |
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2014 Journal Article Molecular inversion probe: a new tool for highly specific detection of plant pathogensLau, Han Yih, Palanisamy, Ramkumar, Trau, Matt and Botella, Jose R. (2014). Molecular inversion probe: a new tool for highly specific detection of plant pathogens. PLoS One, 9 (10) e111182, e111182.1-e111182.9. doi: 10.1371/journal.pone.0111182 |
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2014 Journal Article Detecting exosomes specifically: a multiplexed device based on alternating current electrohydrodynamic induced nanoshearingVaidyanathan, Ramanathan, Naghibosadat, Maedeh, Rauf, Sakandar, Korbie, Darren, Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2014). Detecting exosomes specifically: a multiplexed device based on alternating current electrohydrodynamic induced nanoshearing. Analytical Chemistry, 86 (22), 11125-11132. doi: 10.1021/ac502082b |
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2014 Journal Article eMethylsorb: rapid quantification of DNA methylation in cancer cells on screen-printed gold electrodesKoo, Kevin M., Sina, Abu Ali Ibn, Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2014). eMethylsorb: rapid quantification of DNA methylation in cancer cells on screen-printed gold electrodes. Analyst, 139 (23), 6178-6184. doi: 10.1039/c4an01641f |
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2014 Journal Article DNA ligase-based strategy for quantifying heterogeneous DNA methylation without sequencingWee, Eugene J. H., Rauf, Sakandar, Shiddiky, Muhammad J. A., Dobrovic, Alexander and Trau, Matt (2014). DNA ligase-based strategy for quantifying heterogeneous DNA methylation without sequencing. Clinical Chemistry, 61 (1), 163-171. doi: 10.1373/clinchem.2014.227546 |
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2014 Journal Article eMethylsorb: electrochemical quantification of DNA methylation at CpG resolution using DNA-gold affinity interactionsSina, Abu Ali Ibn, Howell, Sidney, Carrascosa, Laura G., Rauf, Sakandar, Shiddiky, Muhammad J. A . and Trau, Matt (2014). eMethylsorb: electrochemical quantification of DNA methylation at CpG resolution using DNA-gold affinity interactions. Chemical Communications, 50 (86), 13153-13156. doi: 10.1039/C4CC06732K |
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2014 Journal Article Duplex microfluidic SERS detection of pathogen antigens with nanoyeast single-chain variable fragmentsWang, Yuling, Rauf, Sakandar, Grewal, Yadveer S., Spadafora, Lauren J., Shiddiky, Muhammad J. A., Cangelosi, Gerard A., Schlücker, Sebastian and Trau, Matt (2014). Duplex microfluidic SERS detection of pathogen antigens with nanoyeast single-chain variable fragments. Analytical Chemistry, 86 (19), 9930-9938. doi: 10.1021/ac5027012 |
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2014 Journal Article Enzyme catalysis: evolution made easyWee, Eugene J. H. and Trau, Matt (2014). Enzyme catalysis: evolution made easy. Nature Chemistry, 6 (9), 756-757. doi: 10.1038/nchem.2046 |
