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2025

Journal Article

A rapid molecular detection tool for toxigenic M1UK Streptococcus pyogenes

Brouwer, Stephan, Das, Swairindhree, Hayes, Andrew J., Bertolla, Olivia M., Davies, Mark R., Walker, Mark J., Whiley, David M., Irwin, Adam D. and Tickner, Jacob A. (2025). A rapid molecular detection tool for toxigenic M1UK Streptococcus pyogenes. The Journal of Infectious Diseases, 231 (2), e375-e384. doi: 10.1093/infdis/jiae437

A rapid molecular detection tool for toxigenic M1UK Streptococcus pyogenes

2025

Journal Article

A perplexing diagnosis: role of real-time PCR for diagnosis of Haycocknema perplexum

Davidson, Natalie, Lowry, Kym, Parmar, Bijendrasinh Vikramsinh, Robertson, Thomas, Gupta, Rita, Harris, Patrick and Whiley, David (2025). A perplexing diagnosis: role of real-time PCR for diagnosis of Haycocknema perplexum. Pathology, 57, S92. doi: 10.1016/j.pathol.2024.12.378

A perplexing diagnosis: role of real-time PCR for diagnosis of Haycocknema perplexum

2024

Journal Article

A novel murine model mimicking male genital Neisseria species infection using Neisseria musculi

Bryan, Emily R., McRae, Julia, Kumar, Vishnu, Trim, Logan K, Maidment, Toby I, Tickner, Jacob A D, Sweeney, Emma L, William, Elizabeth D, Whiley, David M and Beagley, Kenneth W (2024). A novel murine model mimicking male genital Neisseria species infection using Neisseria musculi. Biology of Reproduction, 111 (3), 613-624. doi: 10.1093/biolre/ioae100

A novel murine model mimicking male genital Neisseria species infection using Neisseria musculi

2024

Journal Article

Emergence of an extensively drug-resistant Neisseria gonorrhoeae clone

van Hal, Sebastiaan J., Sherry, Norelle, Coombs, Geoff, Mowlaboccus, Shakeel, Whiley, David M. and Lahra, Monica M. (2024). Emergence of an extensively drug-resistant Neisseria gonorrhoeae clone. The Lancet Infectious Diseases, 24 (9), e547-e548. doi: 10.1016/s1473-3099(24)00486-9

Emergence of an extensively drug-resistant Neisseria gonorrhoeae clone

2024

Journal Article

Clinical effectiveness and analytical quality of a national point-of-care testing network for sexually transmitted infections integrated into rural and remote primary care clinics in Australia, 2016–2022: an observational program evaluation

Causer, Louise M., Ward, James (TTANGO2 Collaboration), Smith, Kirsty, Saha, Amit, Andrewartha, Kelly, Wand, Handan, Hengel, Belinda, Badman, Steven G., Tangey, Annie, Matthews, Susan, Mak, Donna, Gunathilake, Manoji, Moore, Elizabeth, Speers, David, Persing, David, Anderson, David, Whiley, David (TTANGO2 Collaboration), Maher, Lisa, Regan, David, Donovan, Basil, Fairley, Christopher, Kaldor, John, Shephard, Mark, Guy, Rebecca and TTANGO2 Collaboration (2024). Clinical effectiveness and analytical quality of a national point-of-care testing network for sexually transmitted infections integrated into rural and remote primary care clinics in Australia, 2016–2022: an observational program evaluation. The Lancet Regional Health - Western Pacific, 48 101110, 1-12. doi: 10.1016/j.lanwpc.2024.101110

Clinical effectiveness and analytical quality of a national point-of-care testing network for sexually transmitted infections integrated into rural and remote primary care clinics in Australia, 2016–2022: an observational program evaluation

2024

Journal Article

Sustained transmission over two decades of a previously unrecognised MPT64 negative Mycobacterium tuberculosis strain in Queensland, Australia: a whole genome sequencing study

Bainomugisa, Arnold, Pandey, Sushil, O'Connor, Bridget, Syrmis, Melanie, Whiley, David, Sintchenko, Vitali, Coin, Lachlan J.M., Marais, Ben J. and Coulter, Christopher (2024). Sustained transmission over two decades of a previously unrecognised MPT64 negative Mycobacterium tuberculosis strain in Queensland, Australia: a whole genome sequencing study. The Lancet Regional Health - Western Pacific, 47 101105, 1-12. doi: 10.1016/j.lanwpc.2024.101105

Sustained transmission over two decades of a previously unrecognised MPT64 negative Mycobacterium tuberculosis strain in Queensland, Australia: a whole genome sequencing study

2024

Journal Article

Ceftriaxone resistance in Neisseria gonorrhoeae associated with the penA-60.001 allele in Hanoi, Viet Nam

Adamson, Paul C., Hieu, Vu N., Nhung, Pham H., Whiley, D. M. and Chau, T. M. (2024). Ceftriaxone resistance in Neisseria gonorrhoeae associated with the penA-60.001 allele in Hanoi, Viet Nam. The Lancet Infectious Diseases, 24 (6), e351-e352. doi: 10.1016/s1473-3099(24)00230-5

Ceftriaxone resistance in Neisseria gonorrhoeae associated with the penA-60.001 allele in Hanoi, Viet Nam

2024

Journal Article

The AMR Hub: a public–private partnership to overcome barriers to commercialisation and deliver antimicrobial stewardship innovations

Bonello, Michelle, Applegate, Tanya L., Badman, Steve, Bradshaw, Catriona S., Broom, Alex, Field, Paul, Hocking, Jane S., Huston, Wilhelmina M., Kong, Fabian, Murray, Gerald L., Mokany, Elisa, Pasricha, Shivani, Todd, Alison V., Whiley, David M., Wiseman, Virginia and Guy, Rebecca (2024). The AMR Hub: a public–private partnership to overcome barriers to commercialisation and deliver antimicrobial stewardship innovations. Microbiology Australia, 45 (2), 48-53. doi: 10.1071/MA24017

The AMR Hub: a public–private partnership to overcome barriers to commercialisation and deliver antimicrobial stewardship innovations

2024

Journal Article

Comprehensive observational study evaluating the enduring effectiveness of 4CMenB, the meningococcal B vaccine against gonococcal infections in the Northern Territory and South Australia, Australia: study protocol

Marshall, Helen, Ward, James, Wang, Bing, Andraweera, Prabha, McMillan, Mark, Flood, Louise, Bell, Charlotte, Sisnowski, Jana, Krause, Vicki, Webby, Rosalind, Childs, Emma, Gunathilake, Manoji, Egoroff, Natasha, Leong, Lex, Lawrence, Andrew, Baird, Rob, Freeman, Kevin, Menouhos, Dimitrios, Whiley, David M, Karnon, Jonathan, van Hal, Sebastian and Lahra, Monica M (2024). Comprehensive observational study evaluating the enduring effectiveness of 4CMenB, the meningococcal B vaccine against gonococcal infections in the Northern Territory and South Australia, Australia: study protocol. BMJ Open, 14 (5) e079144, 1-8. doi: 10.1136/bmjopen-2023-079144

Comprehensive observational study evaluating the enduring effectiveness of 4CMenB, the meningococcal B vaccine against gonococcal infections in the Northern Territory and South Australia, Australia: study protocol

2024

Journal Article

Correction: Achievement of therapeutic antibiotic exposures using Bayesian dosing software in critically unwell children and adults with sepsis

Chai, Ming G., Tu, Quyen, Cotta, Menino O., Bauer, Michelle J., Balch, Ross, Okafor, Charles, Comans, Tracy, Kruger, Peter, Meyer, Jason, Shekar, Kiran, Brady, Kara, Fourie, Cheryl, Sharp, Natalie, Vlad, Luminita, Whiley, David, Ungerer, Jacobus P. J., Mcwhinney, Brett C., Farkas, Andras, Paterson, David L., Clark, Julia E., Hajkowicz, Krispin, Raman, Sainath, Bialasiewicz, Seweryn, Lipman, Jeffrey, Forde, Brian M., Harris, Patrick N. A., Schlapbach, Luregn J., Coin, Lachlan, Roberts, Jason A. and Irwin, Adam D. (2024). Correction: Achievement of therapeutic antibiotic exposures using Bayesian dosing software in critically unwell children and adults with sepsis. Intensive Care Medicine, 50 (5), 810-810. doi: 10.1007/s00134-024-07393-9

Correction: Achievement of therapeutic antibiotic exposures using Bayesian dosing software in critically unwell children and adults with sepsis

2024

Journal Article

Multicentre double-blind randomised placebo-controlled trial evaluating the efficacy of the meningococcal B vaccine, 4CMenB (Bexsero), against Neisseria gonorrhoeae infection in men who have sex with men: the GoGoVax study protocol

Seib, Kate L., Donovan, Basil, Thng, Caroline, Lewis, David A., McNulty, Anna, Fairley, Christopher K., Yeung, Barbara, Jin, Fengyi, Fraser, Doug, Bavinton, Benjamin R., Law, Matthew, Chen, Marcus Y., Chow, Eric P. F., Whiley, David M., Mackie, Brent, Jennings, Michael P., Jennison, Amy V., Lahra, Monica M. and Grulich, Andrew E. (2024). Multicentre double-blind randomised placebo-controlled trial evaluating the efficacy of the meningococcal B vaccine, 4CMenB (Bexsero), against Neisseria gonorrhoeae infection in men who have sex with men: the GoGoVax study protocol. BMJ Open, 14 (4) e081675, 1-9. doi: 10.1136/bmjopen-2023-081675

Multicentre double-blind randomised placebo-controlled trial evaluating the efficacy of the meningococcal B vaccine, 4CMenB (Bexsero), against Neisseria gonorrhoeae infection in men who have sex with men: the GoGoVax study protocol

2024

Journal Article

Point-of-care testing and treatment of sexually transmitted and genital infections to improve birth outcomes in high-burden, low-resource settings (WANTAIM): a pragmatic cluster randomised crossover trial in Papua New Guinea

Riddell, Michaela A., Vallely, Lisa M., Mengi, Alice, Badman, Steven G., Low, Nicola, Wand, Handan, Bolnga, John W., Babona, Delly, Mola, Glen D. L., Wiseman, Virginia, Kelly-Hanku, Angela, Homer, Caroline S. E., Morgan, Christopher, Luchters, Stanley, Whiley, David M., Robinson, Leanne J., Au, Lucy, Pukai-Gani, Irene, Laman, Moses, Kariwiga, Grace, Toliman, Pamela J., Batura, Neha, Tabrizi, Sepehr N., Rogerson, Stephen J., Garland, Suzanne M., Guy, Rebecca J., Peeling, Rosanna W., Pomat, William S., Kaldor, John M. and Vallely, Andrew J. B. (2024). Point-of-care testing and treatment of sexually transmitted and genital infections to improve birth outcomes in high-burden, low-resource settings (WANTAIM): a pragmatic cluster randomised crossover trial in Papua New Guinea. Lancet Global Health, 12 (4), e641-e651. doi: 10.1016/S2214-109X(24)00004-4

Point-of-care testing and treatment of sexually transmitted and genital infections to improve birth outcomes in high-burden, low-resource settings (WANTAIM): a pragmatic cluster randomised crossover trial in Papua New Guinea

2024

Journal Article

Response to the ASHM 2023 statement on the use of doxy-PEP in Australia: considerations and recommendations

Bell, Sara F. E., Sweeney, Emma L., Kong, Fabian Y. S., Whiley, David M., Bradshaw, Catriona S. and Tickner, Jacob A. (2024). Response to the ASHM 2023 statement on the use of doxy-PEP in Australia: considerations and recommendations. Medical Journal of Australia, 220 (7), 356-360. doi: 10.5694/mja2.52255

Response to the ASHM 2023 statement on the use of doxy-PEP in Australia: considerations and recommendations

2024

Journal Article

Achievement of therapeutic antibiotic exposures using Bayesian dosing software in critically unwell children and adults with sepsis

Chai, Gene G., Tu, Quyen, Cotta, Menino O., Bauer, Michelle J., Balch, Ross, Okafor, Charles, Comans, Tracy, Kruger, Peter, Meyer, Jason, Shekar, Kiran, Brady, Kara, Fourie, Cheryl, Sharp, Natalie, Vlad, Luminita, Whiley, David, Ungerer, Jacobus P. J., McWhinney, Brett C., Farkas, Andras, Paterson, David L., Clark, Julia E., Hajkowicz, Krispin, Raman, Sainath, Bialasiewicz, Seweryn, Lipman, Jeffrey, Forde, Brian M., Harris, Patrick N. A., Schlapbach, Luregn J., Coin, Lachlan, Roberts, Jason A. and Irwin, Adam D. (2024). Achievement of therapeutic antibiotic exposures using Bayesian dosing software in critically unwell children and adults with sepsis. Intensive Care Medicine, 50 (4), 1-9. doi: 10.1007/s00134-024-07353-3

Achievement of therapeutic antibiotic exposures using Bayesian dosing software in critically unwell children and adults with sepsis

2024

Journal Article

High prevalence of ceftriaxone-resistant and XDR Neisseria gonorrhoeae in several cities of Cambodia, 2022–23: WHO Enhanced Gonococcal Antimicrobial Surveillance Programme (EGASP)

Ouk, V, Heng, L Say, Virak, M, Deng, S, Lahra, M M, Frankson, R, Kreisel, K, McDonald, R, Escher, M, Unemo, M, Wi, T, Maatouk, I, Penh, Phnom, Fensham, Vivian, Kersh, Ellen, Cavailler, Philippe, Mundade, Yamuna, Hal, Sebastiaan J van, Kundu, Ratan L, Hogan, Tiffany R, Whiley, David M, Izumi, Kiyohiko, Nishijima, Takeshi, EGASP Cambodia Working Group and Whiley, David (2024). High prevalence of ceftriaxone-resistant and XDR Neisseria gonorrhoeae in several cities of Cambodia, 2022–23: WHO Enhanced Gonococcal Antimicrobial Surveillance Programme (EGASP). JAC-Antimicrobial Resistance, 6 (2) dlae053, 2. doi: 10.1093/jacamr/dlae053

High prevalence of ceftriaxone-resistant and XDR Neisseria gonorrhoeae in several cities of Cambodia, 2022–23: WHO Enhanced Gonococcal Antimicrobial Surveillance Programme (EGASP)

2024

Journal Article

Comparison of nasopharyngeal swab vs. lower respiratory tract specimen PCR for the diagnosis of Pneumocystis jirovecii pneumonia

Chew, Rusheng, Tozer, Sarah, Ulett, Kimberly, Paterson, David L., Whiley, David, Sloots, Theo, Fielding, David, Zappala, Christopher, Bashirzadeh, Farzad, Hundloe, Justin, Bletchley, Cheryl and Woods, Marion L. (2024). Comparison of nasopharyngeal swab vs. lower respiratory tract specimen PCR for the diagnosis of Pneumocystis jirovecii pneumonia. Open Forum Infectious Diseases, 11 (3) ofae071, ofae071. doi: 10.1093/ofid/ofae071

Comparison of nasopharyngeal swab vs. lower respiratory tract specimen PCR for the diagnosis of Pneumocystis jirovecii pneumonia

2024

Journal Article

Concurrent parC and gyrA fluoroquinolone resistance mutations and associated strains in Mycoplasma genitalium in Queensland, Australia

Ertl, Nicole G., Anderson, Taylah K., Pardo, Carolyn J., Maidment, Toby I., Murray, Gerald L., Bradshaw, Catriona S., Whiley, David M. and Sweeney, Emma L. (2024). Concurrent parC and gyrA fluoroquinolone resistance mutations and associated strains in Mycoplasma genitalium in Queensland, Australia. Journal of Antimicrobial Chemotherapy, 79 (2), 467-469. doi: 10.1093/jac/dkad373

Concurrent parC and gyrA fluoroquinolone resistance mutations and associated strains in Mycoplasma genitalium in Queensland, Australia

2024

Journal Article

Investigating oral human papillomavirus co-infection with Neisseria gonorrhoeae and Chlamydia trachomatis

Trembizki, Ella, Anderson, Taylah, Whiley, David M. and Antonsson, Annika (2024). Investigating oral human papillomavirus co-infection with Neisseria gonorrhoeae and Chlamydia trachomatis. Epidemiology and Infection, 152 e8, e8. doi: 10.1017/s095026882300198x

Investigating oral human papillomavirus co-infection with Neisseria gonorrhoeae and Chlamydia trachomatis

2024

Journal Article

WHO global research priorities for antimicrobial resistance in human health

Bertagnolio, Silvia, Dobreva, Zlatina, Centner, Chad M, Olaru, Ioana Diana, Donà, Daniele, Burzo, Stefano, Huttner, Benedikt D, Chaillon, Antoine, Gebreselassie, Nebiat, Wi, Teodora, Hasso-Agopsowicz, Mateusz, Allegranzi, Benedetta, Sati, Hatim, Ivanovska, Verica, Kothari, Kavita U, Balkhy, Hanan H, Cassini, Alessandro, Hamers, Raph L, Weezenbeek, Kitty Van, Aanensen, David, Alanio, Alexandre, Alastruey-Izquierdo, Ana, Alemayehu, Tinsae, Al-Hasan, Majdi, Allegaert, Karel, Al-Maani, Amal Saif, Al-Salman, Jameela, Alshukairi, Abeer Nizar, Amir, Afreenish ... Zignol, Matteo (2024). WHO global research priorities for antimicrobial resistance in human health. The Lancet Microbe, 5 (11) 100902, 100902-11. doi: 10.1016/S2666-5247(24)00134-4

WHO global research priorities for antimicrobial resistance in human health

2024

Journal Article

Determining Pneumocystis jirovecii colonisation from infection using PCR-based diagnostics in HIV-negative individuals

Watson, Anna Louise, Woodford, John, Britton, Sumudu, Gupta, Rita, Whiley, David and McCarthy, Kate (2024). Determining Pneumocystis jirovecii colonisation from infection using PCR-based diagnostics in HIV-negative individuals. Diagnostics, 14 (1) 114. doi: 10.3390/diagnostics14010114

Determining Pneumocystis jirovecii colonisation from infection using PCR-based diagnostics in HIV-negative individuals