Overview
Background
Dr Ariotti is a Senior Research Fellow and Group Leader at the University of Queensland, Australia. Nick's Lab is focused on using cell biology, structural biology, and biochemistry to understand the molecular mechanisms of endocytosis including the organization of cargo for the transport and packaging of proteins into cells and, specialises in how defects in protein trafficking, and plasma membrane organisation can result in human diseases. He completed his PhD in 2013 at the University of Queensland. He then spent 4 years postdoctoral researcher at the Institute for Molecular Biosciences in Rob Parton’s laboratory where he focused on developing and applying correlative light and electron microscopy approaches to better understand endocytosis. In 2017, Dr Ariotti moved to the Electron Microscope Unit at UNSW to serve as the Associate Director of Biological EM. He spent 5 years at the Electron Microscope Unit establishing Cryo-EM and cryogenic-Correlative Light and Electron Microscopy. In 2022, Dr Ariotti returned to the IMB at UQ as an independent research group leader with a focus on developing and applying novel cryogenic correlative approaches to uncover protein structures in situ.
Availability
- Dr Nicholas Ariotti is:
- Available for supervision
Fields of research
Qualifications
- Bachelor of Science (Honours), The University of Queensland
- Doctor of Philosophy, The University of Queensland
Research interests
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Membrane microdomain organisation in the endosome and on the cell surface
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The structure, composition, and function of caveolae
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Development of advanced Electron Microscopy techniques to answer questions in cell biology
Research impacts
Nick has an exceptional track record of producing high-quality transformative research that challenges long-held hypotheses and breaks new ground. He has secured competitive external funding (16 competitive grant successes), an outstanding publication profile (>75 publications; > 5000 citations), a strong record of supervision, invitations to speak at national and international conferences and a dedication to contributing to the advancement of cell biology research and electron microscopy through service on various national and international committees and associations.
He haspublished in journals such as Nature, Cell, Nature Nanotechnology, Nature Cell Biology, Nature Immunology, Nature Materials, Nature Communications, Developmental Cell, PLoS Biology, The Journal of Cell Biology, Current Biology and EMBO Journal highlighting the impact of his research.
These interests have resulted in significant high-quality publications in three related fields:
i) The structure, composition, and function of caveolae:
ii) The organsiation of membrane microdomains and signalling molecules on the cell surface and within endosomes:
ii) Development of advanced Electron Microscopy techniques to answer questions in cell biology.
Works
Search Professor Nicholas Ariotti’s works on UQ eSpace
2019
Journal Article
Membrane curvature and tension control the formation and collapse of caveolar superstructures
Golani, Gonen, Ariotti, Nicholas, Parton, Robert G. and Kozlov, Michael M. (2019). Membrane curvature and tension control the formation and collapse of caveolar superstructures. Developmental Cell, 48 (4), 523-538.e4. doi: 10.1016/j.devcel.2018.12.005
2019
Journal Article
Thiol-reactive star polymers functionalized with short ethoxy-containing moieties exhibit enhanced uptake in acute lymphoblastic leukemia cells
Bayat, Narges, McOrist, Nathan, Ariotti, Nicholas, Lai, May, Sia, Keith C. S., Li, Yuhuan, Grace, James L., Quinn, John F., Whittaker, Michael R., Kavallaris, Maria, Davis, Thomas P. and Lock, Richard B. (2019). Thiol-reactive star polymers functionalized with short ethoxy-containing moieties exhibit enhanced uptake in acute lymphoblastic leukemia cells. International Journal of Nanomedicine, 14, 9795-9808. doi: 10.2147/IJN.S220326
2018
Journal Article
Retromer has a selective function in cargo sorting via endosome transport carriers
Cui, Yi, Carosi, Julian M., Yang, Zhe, Ariotti, Nicholas, Kerr, Markus C., Parton, Robert G., Sargeant, Timothy J. and Teasdale, Rohan D. (2018). Retromer has a selective function in cargo sorting via endosome transport carriers. The Journal of Cell Biology, 218 (2), jcb.201806153-631. doi: 10.1083/jcb.201806153
2018
Journal Article
Electron microscopic detection of proteins and protein complexes in mammalian cells using APEX-tagged, conditionally stable nanobodies
Hall, Thomas E., Rae, James, Ariotti, Nicholas and Parton, Robert G. (2018). Electron microscopic detection of proteins and protein complexes in mammalian cells using APEX-tagged, conditionally stable nanobodies. Bio-Protocol, 8 (22) e3088, e3088. doi: 10.21769/BioProtoc.3088
2018
Journal Article
Structure of the membrane-assembled retromer coat determined by cryo-electron tomography
Kovtun, Oleksiy, Leneva, Natalya, Bykov, Yury S., Ariotti, Nicholas, Teasdale, Rohan D., Schaffer, Miroslava, Engel, Benjamin D., Owen, David. J., Briggs, John A. G. and Collins, Brett M. (2018). Structure of the membrane-assembled retromer coat determined by cryo-electron tomography. Nature, 561 (7724), 561-+. doi: 10.1038/s41586-018-0526-z
2018
Journal Article
Nucleic acid hybridization on an electrically reconfigurable network of gold-coated magnetic nanoparticles enables microRNA detection in blood
Tavallaie, Roya, McCarroll, Joshua, Le Grand, Marion, Ariotti, Nicholas, Schuhmann, Wolfgang, Bakker, Eric, Tilley, Richard David, Hibbert, David Brynn, Kavallaris, Maria and Gooding, John Justin (2018). Nucleic acid hybridization on an electrically reconfigurable network of gold-coated magnetic nanoparticles enables microRNA detection in blood. Nature Nanotechnology, 13 (11), 1066-1071. doi: 10.1038/s41565-018-0232-x
2018
Journal Article
Cell-free formation and interactome analysis of caveolae
Jung, WooRam, Sierecki, Emma, Bastiani, Michele, O'Carroll, Ailis, Alexandrov, Kirill, Rae, James, Johnston, Wayne, Hunter, Dominic J. B., Ferguson, Charles, Gambin, Yann, Ariotti, Nicholas and Parton, Robert G. (2018). Cell-free formation and interactome analysis of caveolae. The Journal of Cell Biology, 217 (6), 2141-2165. doi: 10.1083/jcb.201707004
2018
Journal Article
Ultrastructural localisation of protein interactions using conditionally stable nanobodies
Ariotti, Nicholas, Rae, James, Giles, Nichole, Martel, Nick, Sierecki, Emma, Gambin, Yann, Hall, Thomas E. and Parton, Robert G. (2018). Ultrastructural localisation of protein interactions using conditionally stable nanobodies. PLoS Biology, 16 (4) e2005473, e2005473. doi: 10.1371/journal.pbio.2005473
2018
Journal Article
PH-responsive morphology-controlled redox behavior and cellular uptake of nanoceria in fibrosarcoma
Mehmood, Rashid, Ariotti, Nicholas, Yang, Jia Lin, Koshy, Pramod and Sorrell, Charles C. (2018). PH-responsive morphology-controlled redox behavior and cellular uptake of nanoceria in fibrosarcoma. ACS Biomaterials Science and Engineering, 4 (3), 1064-1072. doi: 10.1021/acsbiomaterials.7b00806
2018
Journal Article
Real-time synchrotron small-angle x-ray scattering studies of collagen structure during leather processing
Zhang, Yi, Ingham, Bridget, Cheong, Soshan, Ariotti, Nicholas, Tilley, Richard D., Naffa, Rafea, Holmes, Geoff, Clarke, David J. and Prabakar, Sujay (2018). Real-time synchrotron small-angle x-ray scattering studies of collagen structure during leather processing. Industrial and Engineering Chemistry Research, 57 (1), 63-69. doi: 10.1021/acs.iecr.7b03860
2017
Journal Article
Journey to the centre of the cell: Virtual reality immersion into scientific data
Johnston, Angus P. R., Rae, James, Ariotti, Nicholas, Bailey, Benjamin, Lija, Andrew, Webb, Robyn, Ferguson, Charles, Maher, Sheryl, Davis, Thomas P., Webb, Richard I., McGhee, John and Parton, Robert G. (2017). Journey to the centre of the cell: Virtual reality immersion into scientific data. Traffic (Copenhagen, Denmark), 19 (2), 105-110. doi: 10.1111/tra.12538
2017
Journal Article
Correlative light and electron microscopic detection of GFP-labeled proteins using modular APEX
Ariotti, Nicholas, Hall, Thomas E. and Parton, Robert G. (2017). Correlative light and electron microscopic detection of GFP-labeled proteins using modular APEX. Methods in Cell Biology, 140, 105-121. doi: 10.1016/bs.mcb.2017.03.002
2016
Journal Article
Nanomolar oligomerization and selective co-aggregation of α-synuclein pathogenic mutants revealed by single-molecule fluorescence
Sierecki, Emma, Giles, Nichole, Bowden, Quill, Polinkovsky, Mark E., Steinbeck, Janina, Arrioti, Nicholas, Rahman, Diya, Bhumkar, Akshay, Nicovich, Philip R., Ross, Ian, Parton, Robert G., Bocking, Till and Gambin, Yann (2016). Nanomolar oligomerization and selective co-aggregation of α-synuclein pathogenic mutants revealed by single-molecule fluorescence. Scientific Reports, 6 (1) 37630, 37630. doi: 10.1038/srep37630
2016
Journal Article
Parkinson disease-linked Vps35 R524W mutation impairs the endosomal association of retromer and induces α-synuclein aggregation
Follett, Jordan, Bugarcic, Andrea, Yang, Zhe, Ariotti, Nicholas, Norwood, Suzanne J., Collins, Brett M., Parton, Robert G. and Teasdale, Rohan D. (2016). Parkinson disease-linked Vps35 R524W mutation impairs the endosomal association of retromer and induces α-synuclein aggregation. Journal of Biological Chemistry, 291 (35), 18283-18298. doi: 10.1074/jbc.M115.703157
2016
Journal Article
New transgenic lines for localization of GFP-tagged proteins by electron microscope
Hall, Thomas, Ariotti, Nicholas, Ferguson, Charles, Zherui, Xiong and Parton, Robert G. (2016). New transgenic lines for localization of GFP-tagged proteins by electron microscope. Zebrafish, 13 (3), 232-233. doi: 10.1089/zeb.2016.29002.hal
2016
Journal Article
Galectin-1 dimers can scaffold Raf-effectors to increase H-ras nanoclustering
Blazevits, Olga, Mideksa, Yonatan G., Solman, Maja, Ligabue, Alessio, Ariotti, Nicholas, Nakhaeizadeh, Hossein, Fansa, Eyad K., Papageorgiou, Anastassios C., Wittinghofer, Alfred, Ahmadian, Mohammad R. and Abankwa, Daniel (2016). Galectin-1 dimers can scaffold Raf-effectors to increase H-ras nanoclustering. Scientific Reports, 6 (1) 24165, 24165. doi: 10.1038/srep24165
2016
Conference Publication
Redefining caveolae as signalling platforms: specificity of interactions on endocytic caveolae in response to stress
Gambin, Yann, Sierecki, Emma, Jung, WooRam, Ariotti, Nicholas, Giles, Nichole, Bastiani, Michele and Parton, Robert (2016). Redefining caveolae as signalling platforms: specificity of interactions on endocytic caveolae in response to stress. Experimental Biology 2016 Meeting, San Diego, CA United States, 1-5 April 2016. Hoboken, NJ United States: John Wiley & Sons. doi: 10.1096/fasebj.30.1_supplement.879.2
2016
Conference Publication
Journey to the centre of the cell (JTCC)∗: a 3D VR experience derived from migratory breast cancer cell image data
McGhee, John, Bailey, Benjamin, Parton, Robert G., Ariotti, Nicholas and Johnston, Angus (2016). Journey to the centre of the cell (JTCC)∗: a 3D VR experience derived from migratory breast cancer cell image data. 2016 SIGGRAPH ASIA VR Showcase, SA 2016, Macau, China, 5 - 8 December 2016. New York, NY, United States: Association for Computing Machinery. doi: 10.1145/2996376.2996385
2015
Journal Article
Modular detection of GFP-labeled proteins for rapid screening by electron microscopy in cells and organisms
Ariotti, Nicholas, Hall, Thomas, Rae, James, Ferguson, Charles, McMahon, Kerrie-Ann, Martel, Nick, Webb, Robyn E., Webb, Richard I., Teasdale, Rohan D. and Parton, Robert G. (2015). Modular detection of GFP-labeled proteins for rapid screening by electron microscopy in cells and organisms. Developmental Cell, 35 (4), 513-525. doi: 10.1016/j.devcel.2015.10.016
2015
Journal Article
Molecular characterization of caveolin-induced membrane curvature
Ariotti, Nicholas, Rae, James, Leneva, Natalya, Ferguson, Charles, Loo, Dorothy, Okano, Satomi, Hill, Michelle M., Walser, Piers, Collins, Brett M. and Parton, Robert G. (2015). Molecular characterization of caveolin-induced membrane curvature. Journal of Biological Chemistry, 290 (41), 24875-24890. doi: 10.1074/jbc.M115.644336
Supervision
Availability
- Dr Nicholas Ariotti is:
- Available for supervision
Looking for a supervisor? Read our advice on how to choose a supervisor.
Available projects
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Structural and Molecular Characterisation of Chikungunya Virus Replication Organelles
The Ariotti Group applies correlative microscopy to investigate the replication cycle of Chikungunya virus (CHIKV), a single-stranded, positive-sense alphavirus. CHIKV forms distinct plasma membrane–associated RNA replication organelles termed spherules, yet the identity and role of host factors recruited to these domains remain poorly understood. This project will develop new tools to selectively label and target CHIKV recplication organelle enriched sites for high-resolution and molecular analyses. These studies aim to elucidate how CHIKV co-opts host factors for viral amplification.
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Structural Analysis of Receptor Tyrosine Kinases in situ
The Ariotti Lab has established a novel structural pipeline integrating cell-free protein expression with cryo-correlative light and electron tomography (cryo-CLEM) and sub-tomogram averaging. This platform has already yielded the first full-length structure of the filamentous form of ASC (Apoptosis-associated speck-like protein containing a CARD) (bioRxiv). This project will extend will investigate receptor tyrosine kinases (RTKs) Despite their critical roles in signalling, the endosomal organisation of RTKs during protein trafficking remains poorly understood.
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Tools for whole animal correlative targeting of cells of interest
In collaboration with the Parton Group (IMB, University of Queensland), this project will advance correlative imaging approaches to investigate zebrafish macrophages during bacterial infection. The Parton Group have developed infection assays and high-throughput correlative microscopy workflows linking light microscopy with X-ray microscopy and volume electron imaging. The Ariotti Group will focus on developing automated multimodal correlation pipelines to achieve accurate, unbiased, and rapid three-dimensional registration across imaging modalities.
Supervision history
Current supervision
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Doctor Philosophy
Dissecting the bacterial cell envelope for antibiotic drug discovery
Associate Advisor
Other advisors: Professor Rob Capon, Professor Waldemar Vollmer
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Doctor Philosophy
Functional Analysis of Caveolae
Associate Advisor
Other advisors: Dr Harriet Lo, Professor Robert Parton
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Doctor Philosophy
Multi-modal, high-resolution analysis of neural tube development
Associate Advisor
Other advisors: Dr Mel White
Completed supervision
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2017
Doctor Philosophy
Cell-free caveola formation as a system for high throughput interaction analysis
Associate Advisor
Other advisors: Professor Robert Parton
Media
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