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2014 Journal Article Whole-tract dry matter and nitrogen digestibility of lactating dairy cows selected for phenotypic divergence in residual feed intakeThornhill, J. B., Marett, L. C., Auldist, M. J., Greenwood, J. S., Pryce, J. E., Hayes, B. J. and Wales, W. J. (2014). Whole-tract dry matter and nitrogen digestibility of lactating dairy cows selected for phenotypic divergence in residual feed intake. Animal Production Science, 54 (9), 1460-1464. doi: 10.1071/AN14200 |
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2014 Journal Article Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattlevan Binsbergen, Rianne, Bink, Marco C. A. M., Calus, Mario P. L., van Eeuwijk, Fred A., Hayes, Ben J., Hulsegge, Ina and Veerkamp, Roel F. (2014). Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle. Genetics Selection Evolution, 46 (1) 41, 1-13. doi: 10.1186/1297-9686-46-41 |
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2014 Journal Article Regulatory and coding genome regions are enriched for trait associated variants in dairy and beef cattleKoufariotis, Lambros, Chen, Yi-Ping Phoebe, Bolormaa, Sunduimijid and Hayes, Ben J. (2014). Regulatory and coding genome regions are enriched for trait associated variants in dairy and beef cattle. BMC Genomics, 15 (1) 436. doi: 10.1186/1471-2164-15-436 |
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2014 Journal Article Incorporating heifer feed efficiency in the Australian selection index using genomic selectionGonzalez-Recio, O., Pryce, J. E., Haile-Mariam, M. and Hayes, B. J. (2014). Incorporating heifer feed efficiency in the Australian selection index using genomic selection. Journal of Dairy Science, 97 (6), 3883-3893. doi: 10.3168/jds.2013-7515 |
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2014 Journal Article Genetic variants in mammary development, prolactin signalling and involution pathways explain considerable variation in bovine milk production and milk compositionRaven, Lesley-Ann, Cocks, Benjamin G., Goddard, Michael E., Pryce, Jennie E. and Hayes, Ben J. (2014). Genetic variants in mammary development, prolactin signalling and involution pathways explain considerable variation in bovine milk production and milk composition. Genetics Selection Evolution, 46 (1) 29. doi: 10.1186/1297-9686-46-29 |
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2014 Journal Article Improving the analysis of low heritability complex traits for enhanced genetic gain in potatoSlater, Anthony T., Wilson, Graeme M., Cogan, Noel O. I., Forster, John W. and Hayes, Benjamin J. (2014). Improving the analysis of low heritability complex traits for enhanced genetic gain in potato. Theoretical and Applied Genetics, 127 (4), 809-820. doi: 10.1007/s00122-013-2258-7 |
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2014 Journal Article Selection for complex traits leaves little or no classic signatures of selectionKemper, Kathryn E., Saxton, Sarah J., Bolormaa, Sunduimijid, Hayes, Benjamin J. and Goddard, Michael E. (2014). Selection for complex traits leaves little or no classic signatures of selection. BMC Genomics, 15 (1) 246. doi: 10.1186/1471-2164-15-246 |
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2014 Journal Article Holstein-Friesian calves selected for divergence in residual feed intake during growth exhibited significant but reduced residual feed intake divergence in their first lactationMacdonald, K. A., Pryce, J. E., Spelman, R. J., Davis, S. R., Wales, W. J., Waghorn, G. C., Williams, Y. J., II, Marett, L. C. and Hayes, B. J. (2014). Holstein-Friesian calves selected for divergence in residual feed intake during growth exhibited significant but reduced residual feed intake divergence in their first lactation. Journal of Dairy Science, 97 (3), 1427-1435. doi: 10.3168/jds.2013-7227 |
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2014 Journal Article A multi-trait, meta-analysis for detecting pleiotropic polymorphisms for stature, fatness and reproduction in beef cattleBolormaa, Sunduimijid, Pryce, Jennie E., Reverter, Antonio, Zhang, Yuandan, Barendse, William, Kemper, Kathryn, Tier, Bruce, Savin, Keith, Hayes, Ben J. and Goddard, Michael E. (2014). A multi-trait, meta-analysis for detecting pleiotropic polymorphisms for stature, fatness and reproduction in beef cattle. PLoS Genetics, 10 (3) e1004198, e1004198. doi: 10.1371/journal.pgen.1004198 |
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2014 Journal Article Imputation of genotypes from low density (50,000 markers) to high density (700,000 markers) of cows from research herds in Europe, North America, and Australasia using 2 reference populationsPryce, J. E., Johnston, J., Hayes, B. J., Sahana, G., Weigel, K. A., McParland, S., Spurlock, D., Krattenmacher, N., Spelman, R. J., Wall, E. and Calus, M. P. L. (2014). Imputation of genotypes from low density (50,000 markers) to high density (700,000 markers) of cows from research herds in Europe, North America, and Australasia using 2 reference populations. Journal of Dairy Science, 97 (3), 1799-1811. doi: 10.3168/jds.2013-7368 |
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2014 Journal Article An independent validation association study of carcass quality, shear force, intramuscular fat percentage and omega-3 polyunsaturated fatty acid content with gene markers in Australian lambKnight, Matthew I., Daetwyler, Hans D., Hayes, Ben J., Hayden, Matthew J., Ball, Alex J., Pethick, David W. and McDonagh, Matthew B. (2014). An independent validation association study of carcass quality, shear force, intramuscular fat percentage and omega-3 polyunsaturated fatty acid content with gene markers in Australian lamb. Meat Science, 96 (2), 1025-1033. doi: 10.1016/j.meatsci.2013.07.008 |
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2014 Journal Article Genomic selection for recovery of original genetic background from hybrids of endangered and common breedsAmador, Carmen, Hayes, Ben J. and Daetwyler, Hans D. (2014). Genomic selection for recovery of original genetic background from hybrids of endangered and common breeds. Evolutionary Applications, 7 (2), 227-237. doi: 10.1111/eva.12113 |
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2014 Journal Article Multibreed genome wide association can improve precision of mapping causative variants underlying milk production in dairy cattleRaven, Lesley-Ann, Cocks, Benjamin G. and Hayes, Ben J. (2014). Multibreed genome wide association can improve precision of mapping causative variants underlying milk production in dairy cattle. BMC Genomics, 15 (1) 62. doi: 10.1186/1471-2164-15-62 |
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2014 Journal Article Genetic parameters and response to selection in blue mussel (Mytilus galloprovincialis) using a SNP-based pedigreeNguyen, Thuy T. T., Hayes, Ben J. and Ingram, Brett A. (2014). Genetic parameters and response to selection in blue mussel (Mytilus galloprovincialis) using a SNP-based pedigree. Aquaculture, 420-421, 295-301. doi: 10.1016/j.aquaculture.2013.11.021 |
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2014 Journal Article Thermoregulatory differences in lactating dairy cattle classed as efficient or inefficient based on residual feed intakeDiGiacomo, K., Marett, L. C., Wales, W. J., Hayes, B. J., Dunshea, F. R. and Leury, B. J. (2014). Thermoregulatory differences in lactating dairy cattle classed as efficient or inefficient based on residual feed intake. Animal Production Science, 54 (10), 1877-1881. doi: 10.1071/AN14311 |
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2014 Journal Article Genomic selection for feed efficiency in dairy cattlePryce, J. E., Wales, W. J., de Haas, Y., Veerkamp, R. F. and Hayes, B. J. (2014). Genomic selection for feed efficiency in dairy cattle. Animal, 8 (1), 1-10. doi: 10.1017/S1751731113001687 |
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2014 Journal Article Erratum: Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels (J. Dairy Sci. 95:4114-4129)Erbe, M., Hayes, B. J., Matukumalli, L. K., Goswami, S., Bowman, P. J., Reich, C. M., Mason, B. A. and Goddard, M. E. (2014). Erratum: Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels (J. Dairy Sci. 95:4114-4129). Journal of Dairy Science, 97 (10), 6622-6622. doi: 10.3168/jds.2014-97-10-6622 |
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2014 Journal Article Short communication: Validation of genomic breeding value predictions for feed intake and feed efficiency traitsPryce, J. E., Gonzalez-Recio, O., Thornhill, J. B., Marett, L. C., Wales, W. J., Coffey, M. P., de Haas, Y., Veerkamp, R. F. and Hayes, B. J. (2014). Short communication: Validation of genomic breeding value predictions for feed intake and feed efficiency traits. Journal of Dairy Science, 97 (1), 537-542. doi: 10.3168/jds.2013-7376 |
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2014 Journal Article Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictionsDruet, T., Macleod, I. M. and Hayes, B. J. (2014). Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictions. Heredity, 112 (1), 39-47. doi: 10.1038/hdy.2013.13 |
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2013 Journal Article Author reply to A commentary on Pitfalls of predicting complex traits from SNPsWray, Naomi R., Yang, Jian, Hayes, Ben J., Price, Alkes L., Goddard, Michael E. and Visscher, Peter M. (2013). Author reply to A commentary on Pitfalls of predicting complex traits from SNPs. Nature Reviews Genetics, 14 (12), 894-894. doi: 10.1038/nrg3457-c2 |
