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2010 Journal Article Multivariate analysis of a genome-wide association study in dairy cattleBolormaa, S., Pryce, J. E., Hayes, B. J. and Goddard, M. E. (2010). Multivariate analysis of a genome-wide association study in dairy cattle. Journal of Dairy Science, 93 (8), 3818-3833. doi: 10.3168/jds.2009-2980 |
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2010 Journal Article A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypesPryce, J. E., Bolormaa, S., Chamberlain, A. J., Bowman, P. J., Savin, K., Goddard, M. E. and Hayes, B. J. (2010). A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes. Journal of Dairy Science, 93 (7), 3331-3345. doi: 10.3168/jds.2009-2893 |
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2010 Journal Article A genome wide association study for QTL affecting direct and maternal effects of stillbirth and dystocia in cattleOlsen, H. G., Hayes, B. J., Kent, M. P., Nome, T., Svendsen, M. and Lien, S. (2010). A genome wide association study for QTL affecting direct and maternal effects of stillbirth and dystocia in cattle. Animal Genetics, 41 (3), 273-280. doi: 10.1111/j.1365-2052.2009.01998.x |
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2010 Journal Article Genetic markers for lactation persistency in primiparous Australian dairy cowsPryce, J. E., Haile-Mariam, M., Verbyla, K., Bowman, P. J., Goddard, M. E. and Hayes, B. J. (2010). Genetic markers for lactation persistency in primiparous Australian dairy cows. Journal of Dairy Science, 93 (5), 2202-2214. doi: 10.3168/jds.2009-2666 |
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2010 Journal Article Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphismsMacLeod, I. M., Hayes, B. J., Savin, K. W., Chamberlain, A. J., McPartlan, H. C. and Goddard, M. E. (2010). Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphisms. Journal of Animal Breeding and Genetics, 127 (2), 133-142. doi: 10.1111/j.1439-0388.2009.00831.x |
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2010 Journal Article Weight and time of onset of female-superior sexual dimorphism in pond reared Penaeus monodonGopal, Chavali, Gopikrishna, Gopalapillay, Krishna, Gopal, Jahageerdar, Shrinivas S., Rye, Morten, Hayes, Ben J., Paulpandi, Sivagnanam, Kiran, Remanibhaskaran P., Pillai, Subramaniapillai M., Ravichandran, Pitchaiyappan, Ponniah, Alphis G. and Kumar, Dilip (2010). Weight and time of onset of female-superior sexual dimorphism in pond reared Penaeus monodon. Aquaculture, 300 (1-4), 237-239. doi: 10.1016/j.aquaculture.2010.01.007 |
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2009 Journal Article Using LASSO to estimate marker effects for Genomic SelectionUsai, Mario Graziano, Goddard, Mike E. and Hayes, Ben J. (2009). Using LASSO to estimate marker effects for Genomic Selection. Italian Journal of Animal Science, 8 (SUPPL. 2), 168-170. |
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2009 Journal Article A novel predictor of multilocus haplotype homozygosity: comparison with existing predictorsMacLeod, I. M., Meuwissen, T. H. E., Hayes, B. J. and Goddard, M. E. (2009). A novel predictor of multilocus haplotype homozygosity: comparison with existing predictors. Genetics Research, 91 (6), 413-426. doi: 10.1017/S0016672309990358 |
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2009 Journal Article LASSO with cross-validation for genomic selectionUsai, M. Graziano, Goddard, Mike E. and Hayes, Ben J. (2009). LASSO with cross-validation for genomic selection. Genetics Research, 91 (6), 427-436. doi: 10.1017/S0016672309990334 |
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2009 Journal Article Sampling strategies for whole genome association studies in aquaculture and outcrossing plant speciesHayes, B. J., MacLeod, I. M. and Baranski, M. (2009). Sampling strategies for whole genome association studies in aquaculture and outcrossing plant species. Genetics Research, 91 (6), 367-371. doi: 10.1017/S0016672309990310 |
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2009 Journal Article Reliability of genomic predictions across multiple populationsde Roos, A. P. W., Hayes, B. J. and Goddard, M. E. (2009). Reliability of genomic predictions across multiple populations. Genetics, 183 (4), 1545-1553. doi: 10.1534/genetics.109.104935 |
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2009 Journal Article Accuracy of genomic breeding values in multi-breed dairy cattle populationsHayes, Ben J., Bowman, Phillip J., Chamberlain, Amanda C., Verbyla, Klara and Goddard, Mike E. (2009). Accuracy of genomic breeding values in multi-breed dairy cattle populations. Genetics Selection Evolution, 41 (1) 51, 321-329. doi: 10.1186/1297-9686-41-51 |
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2009 Journal Article Accuracy of genomic selection using stochastic search variable selection in Australian Holstein Friesian dairy cattleVerbyla, Klara L., Hayes, Ben J., Bowman, Philip. J. and Goddard, Michael E. (2009). Accuracy of genomic selection using stochastic search variable selection in Australian Holstein Friesian dairy cattle. Genetics Research, 91 (5), 307-311. doi: 10.1017/S0016672309990243 |
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2009 Journal Article Characterization of a QTL region affecting clinical mastitis and protein yield on BTA6Nilsen, H., Olsen, H. G., Hayes, B., Nome, T., Sehested, E., Svendsen, M., Meuwissen, T. H. E. and Lien, S. (2009). Characterization of a QTL region affecting clinical mastitis and protein yield on BTA6. Animal Genetics, 40 (5), 701-712. doi: 10.1111/j.1365-2052.2009.01908.x |
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2009 Journal Article A validated genome wide association study to breed cattle adapted to an environment altered by climate changeHayes, Ben J., Bowman, Phil J., Chamberlain, Amanda J., Savin, Keith, van Tassell, Curt P., Sonstegard, Tad S. and Goddard, Mike E. (2009). A validated genome wide association study to breed cattle adapted to an environment altered by climate change. PLoS ONE, 4 (8) e6676, e6676. doi: 10.1371/journal.pone.0006676 |
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2009 Journal Article Gene by environment interactions for production traits in Australian dairy cattleLillehammer, M., Hayes, B. J., Meuwissen, T. H. E. and Goddard, M. E. (2009). Gene by environment interactions for production traits in Australian dairy cattle. Journal of Dairy Science, 92 (8), 4008-4017. doi: 10.3168/jds.2008-1484 |
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2009 Journal Article Mapping genes for complex traits in domestic animals and their use in breeding programmesGoddard, Michael E. and Hayes, Ben J. (2009). Mapping genes for complex traits in domestic animals and their use in breeding programmes. Nature Reviews Genetics, 10 (6), 381-391. doi: 10.1038/nrg2575 |
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2009 Journal Article Genome-wide survey of SNP variation uncovers the genetic structure of cattle breedsGibbs, Richard A., Taylor, Jeremy F., Van Tassell, Curtis P., Barendse, William, Eversoie, Kallye A., Gill, Clare A., Green, Ronnie D., Hamernik, Debora L., Kappes, Steven M., Lien, Sigbjorn, Matukumalli, Lakshmi K., McEwan, John C., Nazareth, Lynne V., Schnabel, Robert D., Taylor, Jeremy F., Weinstock, George M., Wheeler, David A., Ajmone-Marsan, Paolo, Barendse, William, Boettcher, Paul J., Caetano, Alexandre R., Garcia, Jose Fernando, Hanotte, Olivier, Mariani, Paola, Skow, Loren C., Williams, John L., Caetano, Alexandre R., Diallo, Boubacar, Green, Ronnie D. ... Dodds, Ken G. (2009). Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science, 324 (5926), 528-532. doi: 10.1126/science.1167936 |
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2009 Journal Article An examination of positive selection and changing effective population size in Angus and Holstein cattle populations (Bos taurus) using a high density SNP genotyping platform and the contribution of ancient polymorphism to genomic diversity in Domestic caMacEachern, Sean, Hayes, Ben, McEwan, John and Goddard, Mike (2009). An examination of positive selection and changing effective population size in Angus and Holstein cattle populations (Bos taurus) using a high density SNP genotyping platform and the contribution of ancient polymorphism to genomic diversity in Domestic ca. BMC Genomics, 10 181. doi: 10.1186/1471-2164-10-181 |
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2009 Journal Article A genome map of divergent artificial selection between Bos taurus dairy cattle and Bos taurus beef cattleHayes, B. J., Chamberlain, A. J., Maceachern, S., Savin, K., McPartlan, H., MacLeod, I., Sethuraman, L. and Goddard, M. E. (2009). A genome map of divergent artificial selection between Bos taurus dairy cattle and Bos taurus beef cattle. Animal Genetics, 40 (2), 176-184. doi: 10.1111/j.1365-2052.2008.01815.x |
