Overview
Background
My PhD, conferred in 2003 by the University of Queensland (UQ), was undertaken under the guidance of Prof. Richard Lewis (IMB), A/Prof. Barry Chiswell (UQ, Chemistry), and Prof. Michael Moore (UQ, ENTOX), on the topic of Ciguatoxins, which are extremely potent site 5 sodium channel activators present in ciguatoxic fish. Their isolation and identification represented a challenging and rewarding PhD. The most innovative aspect of my research was the development of an approach involving radiolabelled receptor binding assays and LC-MS analyses that resulted in the discovery of a new family of ciguatoxins in the Indian ocean.
In 2002, I worked for Dr Kevin James at Cork Institute of Technology (CIT) as a full-time researcher, with responsibility for the maintenance, and training of personnel to use triple quadrupole and quadrupole time-of-flight mass spectrometers. I was also responsible for delivery of an instrumentational analytical chemistry course to undergraduate chemistry students. Whilst at this post I was involved in projects that investigated the fragmentation pathways of a myriad of phycotoxins, mycotoxins, and cyanobacterial toxins using mass spectrometry. These studies resulted in a number of publications in leading discipline journals including the Journal of Mass Spectrometry and Rapid Communications in Mass Spectrometry. The results of these structural studies were then applied to develop sensitive and specific quantitative assays for the routine detection of these compounds resulting in publications in Analytical Chemistry. Many of the assays developed translated to have significant impact on the Irish economy, through their adoption in establishing when it was safe to harvest and sell mussels. Dr James provided an encouraging environment to post-doctoral employees, and whilst there I wrote and submitted a number of successful research grant applications, and a received an Irish Post-Doctoral Fellowship.
In 2006 I moved back to Australia to work for Prof. Jeffrey Gorman at Queensland Institute for Medical Research (QIMR). I was principally recruited to establish a suite of electrospray mass spectrometers within Prof. Gorman’s new laboratory and facilitate proteomic analysis on these systems. At QIMR, Prof Gorman acquired the first LTQ-Orbitrap mass spectrometer in the country, along with the first ion trap equipped fitted with electron-transfer dissociation capabilities.
In 2008, I was recruited by Prof. Deon Venter to the Mater Hospital (in Brisbane), specifically to work for him as a part of the CRC for Biomarker Translation. The CRC project entailed establishing matrix-assisted laser desorption ionisation (MALDI) imaging and proteomics to investigate various breast cancer classes, and ovarian cancer. In collaboration, with Prof. Glenn King, Dr Eivind Undheim and A/Prof. Bryan Fry (U. Queensland), I have been involved with developing protocols to allow MALDI imaging of spider and centipede venom glands. A great deal of effort was involved in producing a suitable fixation approach that preserved the tissue without cross linking the peptides and proteins. Many parts of this work have been published, and presented at numerous conferences. The current optimised protocols allow us to routinely produce MALDI imaging data from serial sections cut from processed spider and centipede samples.
In 2017, I was recruited by Prof. Roger Wepf (UQ, CMM), and Prof. Ian Brereton (UQ, CAI), to come to work at the University of Queensland. As a part of this recruitment the Imaging Mass Spectrometry facility was transferred from the Mater Hospital to CMM/CAI at the University of Queensland (St Lucia campus). The move from the Mater involved relocation of the capabilities from an individual research group into an environment where the facility could be accessed by a much wider user base in accordance with CMM and CAI operating principles. The Imaging Mass Spectrometry facility at UQ can be accessed on a 24 hr/7 day basis for all users who have been trained to use the equipment.
Availability
- Dr Brett Hamilton is:
- Available for supervision
Qualifications
- Bachelor of Science, The University of Queensland
- Bachelor (Honours) of Science (Advanced), The University of Queensland
- Doctor of Philosophy, The University of Queensland
Research impacts
The number of publications since 2002, which include my PhD papers, is 38. My primary interest has been the application of mass spectrometry to various biological problems, most recently in a spatially resolved context. Currently my H index is 21, with an average citation rate of 30 citations per article. During the last 2 years, publications I have been involved with have been cited at a rate of close to 150 citations per year. During the last couple of years more of the projects I have been involved with have been published in higher impact journals such nature communications (DOI: 10.1038/ncomms4521), science advances (DOI: 10.1126/sciadv.aau4640). The work that I performed during my PhD and published in the lower impact journal, Toxicon (DOI: 10.1016/j.toxicon.2009.06.007 and 10.1016/S0041-0101(01)00259-8) are still quite highly cited because the published articles defined a new family of ciguatoxins and the first identification of ciguatoxin in human tissue sample associated with a fatality.
A number of the analytical methods developed at Cork Institute of Technology, under the guidance of Dr Kevin James, are still highly cited. Much of this work was published in journals such as Journal of Chromatography A, Toxicon, Rapid Communications in Mass Spectrometry, Analytical Chemistry, and the International Journal of Mass Spectrometry. Some of the approaches developed are still being used by regulators in Ireland today, allowing in many cases the replacement of mouse bioassay with more specific, targeted and humane methods of routine testing for a variety of analyte classes.
During my time at QIMR a couple of significant papers were published while I worked for Prof Jeffrey Gorman at QIMR, namely the post-translational modification work we undertook using the LTQ-Orbitrap and Ultraflex III looking at the Notch and hypoxia signaling pathways (DOI: 10.1073/pnas.0711591105), and hookworm secreted proteome analysis (DOI: 10.1074/mcp.M800206-MCP200).
During my time at the Mater, working for Prof Deon Venter, much time was spent developing Mass Spectrometry Imaging (MSI). The most cited and impactful work from this time was the cone snail predation and defensive story, which was published in nature communications with PI Lewis (DOI: 10.1038/ncomms4521) and really has changed the paradigm in the cone snail field – especially in the context of deciphering the predatory components from the defensive components. Possibly the most impactful paper we have produced in the IMS field describes how we developed a new sample preparation protocol to enable aldehyde free fixation of delicate venom gland samples, which enabled both the preservation of the samples and the ability to product protein and peptide IMS data. The first paper describing this workflow was published with Dr Eivind Undheim and Prof Glenn King in PNAS (DOI: 10.1073/pnas.1424068112) describing its application the centipede venom glands.
After moving the IMS facility in 2017 from the Mater to the CMM at UQ, I have been facilitating access to the facility in addition to maintaining existing and establishing new collaborations in the Imaging Mass Spectrometry space. Once the facility more functioning after move, I have been activity recruiting researchers to come and use the instruments to assist various research projects. To-date, since late 2017 I have been involved in 7 published articles, with a number more under review or preparation. One of these articles was published in science advances, describing the venom of the giant bullant (Myrmecia gulosa) Sci Adv. 2018 Sep; 4(9): eaau4640. We have a manuscript under review which emanates from a collaboration between myself, Dr Eivind Undheim, CI Blanksby and Dr David Marshall.
Works
Search Professor Brett Hamilton’s works on UQ eSpace
2012
Journal Article
High resolution spatial mapping of brominated pyrrole-2-aminoimidazole alkaloids distributions in the marine sponge Stylissa flabellata via MALDI-mass spectrometry imaging
Yarnold, Jennifer E., Hamilton, Brett R., Welsh, David T., Pool, Gertruida F., Venter, Deon J. and Carroll, Anthony R. (2012). High resolution spatial mapping of brominated pyrrole-2-aminoimidazole alkaloids distributions in the marine sponge Stylissa flabellata via MALDI-mass spectrometry imaging. Molecular BioSystems, 8 (9), 2249-2259. doi: 10.1039/C2MB25152C
2012
Conference Publication
The bio-logic of venom complexity
Morgenstern, David, Hamilton, Brett, Sher, Daniel, Jones, Alun, Mattius, Gideon, Zlotkin, Eli, Venter, Deon and King, Glenn F. (2012). The bio-logic of venom complexity. 17th World Congress of the International-Society-on-Toxinology (IST)/Venom Week/4th International Scientific Symposium on All Things Venomous, Honolulu, Hawaii, United States, 8-13 July 2012. Kidlington, Oxford, United Kingdom: Pergamon. doi: 10.1016/j.toxicon.2012.04.285
2010
Journal Article
Human fatality associated with Pacific ciguatoxin contaminated fish
Hamilton, Brett, Whittle, Nigel, Shaw, Glen, Eaglesham, Geoff, Moore, Michael R. and Lewis, Richard J. (2010). Human fatality associated with Pacific ciguatoxin contaminated fish. Toxicon, 56 (5), 668-673. doi: 10.1016/j.toxicon.2009.06.007
2010
Conference Publication
The development of a rapid method for the isolation of four azaspiracids for use as reference materials for quantitative LC-MS-MS methods
Canás, Isa Ruppen, O'Callaghan, Keith, Moroney, Cian, Hamilton, Brett, James, Kevin J. and Furey, Ambrose (2010). The development of a rapid method for the isolation of four azaspiracids for use as reference materials for quantitative LC-MS-MS methods. doi: 10.1007/s00216-010-4007-y
2010
Journal Article
First evidence of azaspiracids (AZAs): A family of lipophilic polyether marine toxins in scallops (Argopecten purpuratus) and mussels (Mytilus chilensis) collected in two regions of Chile
López-Rivera, A., O'Callaghan, K., Moriarty, M., O'Driscoll, D., Hamilton, B., Lehane, M., James, K. J. and Furey, A. (2010). First evidence of azaspiracids (AZAs): A family of lipophilic polyether marine toxins in scallops (Argopecten purpuratus) and mussels (Mytilus chilensis) collected in two regions of Chile. Toxicon, 55 (4), 692-701. doi: 10.1016/j.toxicon.2009.10.020
2009
Journal Article
Proteolytic degradation of hemoglobin in the intestine of the human hookworm necator Americanus
Ranjit, Najju, Zhan, Bin, Hamilton, Brett, Stenzel, Deborah, Lowthe, Jonathan, Pearson, Mark, Gorman, Jeffrey, Hotez, Peter and Loukas, Alex (2009). Proteolytic degradation of hemoglobin in the intestine of the human hookworm necator Americanus. Journal of Infectious Diseases, 199 (6), 904-912. doi: 10.1086/597048
2009
Journal Article
Proteomics analysis of the excretory/secretory component of the blood-feeding stage of the hookworm, Ancylostoma caninum
Mulvenna, Jason, Hamilton, Brett, Nagaraj, Shivashankar H., Smyth, Danielle, Loukas, Alex and Gorman, Jeffrey J. (2009). Proteomics analysis of the excretory/secretory component of the blood-feeding stage of the hookworm, Ancylostoma caninum. Molecular and Cellular Proteomics, 8 (1), 109-121. doi: 10.1074/mcp.M800206-MCP200
2008
Journal Article
Interaction with factor inhibiting HIF-1 defines an additional mode of cross-coupling between the Notch and hypoxia signaling pathways
Zheng, Xiaofeng, Linke, Sarah, Dias, José M., Zheng, Xiaowei, Gradin, Katarina, Wallis, Tristan P., Hamilton, Brett R., Gustafsson, Maria, Ruas, Jorge L., Wilkins, Sarah, Bilton, Rebecca L., Brismar, Kerstin, Whitelaw, Murray L., Pereira, Teresa, Gorman, Jeffrey J., Ericson, Johan, Peet, Daniel J., Lendahl, Urban and Poellinger, Lorenz (2008). Interaction with factor inhibiting HIF-1 defines an additional mode of cross-coupling between the Notch and hypoxia signaling pathways. Proceedings of the National Academy of Sciences of the United States of America, 105 (9), 3368-3373. doi: 10.1073/pnas.0711591105
2007
Journal Article
Liquid chromatography-tandem mass spectrometry application, for the determination of extracellular hepatotoxins in Irish lake and drinking waters
Allis, Orla, Dauphard, Justine, Hamilton, Brett, Shuilleabhain, Aine Ni, Lehane, Mary, James, Kevin J. and Furey, Ambrose (2007). Liquid chromatography-tandem mass spectrometry application, for the determination of extracellular hepatotoxins in Irish lake and drinking waters. Analytical Chemistry, 79 (9), 3436-3447. doi: 10.1021/ac062088q
2007
Journal Article
Liquid chromatography quadrupole time-of-flight mass spectrometry analysis of carbosulfan, carbofuran, 3-hydroxycarbofuran, and other metabolites in food
Soler, Carla, Hamilton, Brett, Furey, Ambrose, James, Kevin J., Mañes, Jordi and Picó, Yolanda (2007). Liquid chromatography quadrupole time-of-flight mass spectrometry analysis of carbosulfan, carbofuran, 3-hydroxycarbofuran, and other metabolites in food. Analytical Chemistry, 79 (4), 1492-1501. doi: 10.1021/ac060709+
2007
Journal Article
Identification of N,N epsilon-dimethyl-lysine in the murine dioxin receptor using MALDI-TOF/TOF- and ESI-LTQ-Orbitrap-FT-MS
Dave, KA, Hamilton, BR, Wallis, TP, Furness, SGB, Whitelaw, ML and Gorman, JJ (2007). Identification of N,N epsilon-dimethyl-lysine in the murine dioxin receptor using MALDI-TOF/TOF- and ESI-LTQ-Orbitrap-FT-MS. International Journal of Mass Spectrometry, 268 (2-3), 168-180. doi: 10.1016/j.ijms.2007.06.001
2006
Journal Article
Comparison of four mass analyzers for determining carbosulfan and its metabolites in citrus by liquid chromatography/mass spectrometry
Soler, Carla, Hamilton, Brett, Furey, Ambrose, James, Kevin J., Mañes, Jordi and Picó, Yolanda (2006). Comparison of four mass analyzers for determining carbosulfan and its metabolites in citrus by liquid chromatography/mass spectrometry. Rapid Communications in Mass Spectrometry, 20 (14), 2151-2164. doi: 10.1002/rcm.2561
2006
Journal Article
Optimization of LC–MS/MS using triple quadrupole mass analyzer for the simultaneous analysis of carbosulfan and its main metabolites in oranges
Soler, Carla, Hamilton, Brett, Furey, Ambrose, James, Kevin J., Mañes, Jordi and Picó, Yolanda (2006). Optimization of LC–MS/MS using triple quadrupole mass analyzer for the simultaneous analysis of carbosulfan and its main metabolites in oranges. Analytica Chimica Acta, 571 (1), 1-11. doi: 10.1016/j.aca.2006.04.033
2005
Journal Article
Persistence of yessotoxin under light and dark conditions
Mitrovic, Simon M., Hamilton, Brett, McKenzie, Lincoln, Furey, Ambrose and James, Kevin J. (2005). Persistence of yessotoxin under light and dark conditions. Marine Environmental Research, 60 (3), 397-401. doi: 10.1016/j.marenvres.2005.01.001
2005
Conference Publication
Strategies to avoid the mis-identification of anatoxin-a using mass spectrometry in the forensic investigation of acute neurotoxic poisoning
Furey, Ambrose, Crowley, Janet, Hamilton, Brett, Lehane, Mary and James, Kevin J. (2005). Strategies to avoid the mis-identification of anatoxin-a using mass spectrometry in the forensic investigation of acute neurotoxic poisoning. Elsevier BV. doi: 10.1016/j.chroma.2005.05.040
2005
Journal Article
Anatoxins and degradation products, determined using hybrid quadrupole time-of-flight and quadrupole ion-trap mass spectrometry: Forensic investigations of cyanobacterial neurotoxin poisoning
James, Kevin J., Crowley, Janet, Hamilton, Brett, Lehane, Mary, Skulberg, Olav and Furey, Ambrose (2005). Anatoxins and degradation products, determined using hybrid quadrupole time-of-flight and quadrupole ion-trap mass spectrometry: Forensic investigations of cyanobacterial neurotoxin poisoning. Rapid Communications in Mass Spectrometry, 19 (9), 1167-1175. doi: 10.1002/rcm.1894
2004
Journal Article
Studies of polyether toxins in the marine phytoplankton, Dinophysis acuta, in Ireland using multiple tandem mass spectrometry
Puente, Patricia Fernández, Sáez, María José Fidalgo, Hamilton, Brett, Furey, Ambrose and James, Kevin J. (2004). Studies of polyether toxins in the marine phytoplankton, Dinophysis acuta, in Ireland using multiple tandem mass spectrometry. Toxicon, 44 (8), 919-926. doi: 10.1016/j.toxicon.2004.09.001
2004
Journal Article
Nano liquid chromatography with hybrid quadrupole time-of-flight mass spectrometry for the determination of yessotoxin in marine phytoplankton
Cañás, Isabel Ruppén, Hamilton, Brett, Amandi, Mónica Fernández, Furey, Ambrose and James, Kevin J. (2004). Nano liquid chromatography with hybrid quadrupole time-of-flight mass spectrometry for the determination of yessotoxin in marine phytoplankton. Journal of Chromatography A, 1056 (1-2), 253-256. doi: 10.1016/j.chroma.2004.07.047
2004
Journal Article
Rapid determination of polyether marine toxins using liquid chromatography–multiple tandem mass spectrometry
Puente, Patricia Fernández, Sáez, María José Fidalgo, Hamilton, Brett, Lehane, Mary, Ramstad, Hanne, Furey, Ambrose and James, Kevin J. (2004). Rapid determination of polyether marine toxins using liquid chromatography–multiple tandem mass spectrometry. Journal of Chromatography A, 1056 (1-2), 77-82. doi: 10.1016/j.chroma.2004.07.036
2004
Journal Article
Liquid chromatography—multiple tandem mass spectrometry for the determination of ten azaspiracids, including hydroxyl analogues in shellfish
Lehane, Mary, Sáez, Marı́a José Fidalgo, Magdalena, Ana Braña, Cañás, Isabel Ruppén, Sierra, Mónica Dı́az, Hamilton, Brett, Furey, Ambrose and James, Kevin J (2004). Liquid chromatography—multiple tandem mass spectrometry for the determination of ten azaspiracids, including hydroxyl analogues in shellfish. Journal of Chromatography A, 1024 (1-2), 63-70. doi: 10.1016/j.chroma.2003.10.045
Funding
Past funding
Supervision
Availability
- Dr Brett Hamilton is:
- Available for supervision
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