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2010

Journal Article

Applying bi-directional Jarzynski methods to quasi-equilibrium states

Reid, James C., Williams, Stephen R. and Searles, Debra J. (2010). Applying bi-directional Jarzynski methods to quasi-equilibrium states. Australian Journal of Chemistry, 63 (3), 357-362. doi: 10.1071/CH09458

Applying bi-directional Jarzynski methods to quasi-equilibrium states

2009

Journal Article

On violations of Le Chatelier's principle for a temperature change in small systems observed for short times

Dasmeh, Pouria, Searles, Debra J., Ajloo, Davood, Evans, Denis J. and Williams, Stephen R. (2009). On violations of Le Chatelier's principle for a temperature change in small systems observed for short times. Journal of Chemical Physics, 131 (21) 214503, 214503.1-214503.7. doi: 10.1063/1.3261849

On violations of Le Chatelier's principle for a temperature change in small systems observed for short times

2009

Journal Article

Dissipation and the relaxation to equilibrium

Evans, Denis J., Searles, Debra J. and Williams, Stephen R. (2009). Dissipation and the relaxation to equilibrium. Journal of Statistical Mechanics-Theory and Experiment, 2009 (7) P07029, P07029.1-P07029.11. doi: 10.1088/1742-5468/2009/07/P07029

Dissipation and the relaxation to equilibrium

2009

Journal Article

The effect of confinement and wall structure on the kinetics of isomerisation of n-butane

Brookes, Sarah J., Searles, Debra J. and Travis, Karl P. (2009). The effect of confinement and wall structure on the kinetics of isomerisation of n-butane. Molecular Simulation, 35 (1-2), 172-185. doi: 10.1080/08927020802350935

The effect of confinement and wall structure on the kinetics of isomerisation of n-butane

2008

Journal Article

The glass transition and the Jarzynski equality

Williams, Stephen R., Searles, Debra J. and Evans, Denis J. (2008). The glass transition and the Jarzynski equality. Journal of Chemical Physics, 129 (13) 134504, 134504.1-134504.12. doi: 10.1063/1.2982172

The glass transition and the Jarzynski equality

2008

Journal Article

Nonequilibrium free-energy relations for thermal changes

Williams, Stephen R., Searles, Debra J. and Evans, Denis J. (2008). Nonequilibrium free-energy relations for thermal changes. Physical Review Letters, 100 (25) 250601, 250601.1-250601.4. doi: 10.1103/PhysRevLett.100.250601

Nonequilibrium free-energy relations for thermal changes

2008

Journal Article

Chaotic properties of isokinetic-isobaric atomic systems under planar shear and elongational flows

Frascoli, Federico, Searles, Debra J. and Todd, B. D. (2008). Chaotic properties of isokinetic-isobaric atomic systems under planar shear and elongational flows. Physical Review E, 77 (5) 056217. doi: 10.1103/PhysRevE.77.056217

Chaotic properties of isokinetic-isobaric atomic systems under planar shear and elongational flows

2008

Journal Article

Temporal asymmetry of fluctuations in nonequilibrium steady states: links with correlation functions and nonlinear response

Paneni, Carlo, Searles, Debra J. and Rondoni, Lamberto (2008). Temporal asymmetry of fluctuations in nonequilibrium steady states: links with correlation functions and nonlinear response. Journal of Chemical Physics, 128 (16) 164515, 164515. doi: 10.1063/1.2894471

Temporal asymmetry of fluctuations in nonequilibrium steady states: links with correlation functions and nonlinear response

2008

Journal Article

On the fluctuation theorem for the dissipation function and its connection with response theory

Evans, Denis J., Searles, Debra J. and Williams, Stephen R. (2008). On the fluctuation theorem for the dissipation function and its connection with response theory. Journal of Chemical Physics, 128 (1) 014504, 014504.1-014504.6. doi: 10.1063/1.2812241

On the fluctuation theorem for the dissipation function and its connection with response theory

2008

Journal Article

Fluctuation relations, free energy calculations and irreversibility

Searles, Debra J. and Evans, Denis J. (2008). Fluctuation relations, free energy calculations and irreversibility. Chemical Modelling: Applications and Theory, 5, 182-207. doi: 10.1039/b608839m

Fluctuation relations, free energy calculations and irreversibility

2008

Journal Article

Fluctuation theorems

Sevick, E. M., Prabhakar, R., Williams, Stephen R. and Searles, Debra J. (2008). Fluctuation theorems. Annual Review of Physical Chemistry, 59 (1), 603-633. doi: 10.1146/annurev.physchem.58.032806.104555

Fluctuation theorems

2007

Journal Article

The steady state fluctuation relation for the dissipation function

Searles, Debra J., Rondoni, Lamberto and Evans, Denis J. (2007). The steady state fluctuation relation for the dissipation function. Journal of Statistical Physics, 128 (6), 1337-1363. doi: 10.1007/s10955-007-9372-3

The steady state fluctuation relation for the dissipation function

2007

Journal Article

Boundary condition independence of molecular dynamics simulations of planar elongational flow

Frascoli, Federico, Todd, B. D. and Searles, Debra J. (2007). Boundary condition independence of molecular dynamics simulations of planar elongational flow. Physical Review E, 75 (6 Article No.066702) 066702. doi: 10.1103/PhysRevE.75.066702

Boundary condition independence of molecular dynamics simulations of planar elongational flow

2007

Journal Article

Non-Hamiltonian molecular dynamics implementation of the Gibbs ensemble method. II. Molecular liquid-vapor results for carbon dioxide

Bratschi, Christoph, Huber, Hanspeter and Searles, Debra J. (2007). Non-Hamiltonian molecular dynamics implementation of the Gibbs ensemble method. II. Molecular liquid-vapor results for carbon dioxide. Journal of Chemical Physics, 126 (16) 164105, 164105.1-164105.8. doi: 10.1063/1.2720835

Non-Hamiltonian molecular dynamics implementation of the Gibbs ensemble method. II. Molecular liquid-vapor results for carbon dioxide

2007

Journal Article

Accurate Determination of Nuclear Quadrupole Coupling Constants and other NMR Parameters in Liquids from the Combination of Molecular Dynamics Simulations and ab initio Calculations

Searles, Debra J. and Huber, Hanspeter (2007). Accurate Determination of Nuclear Quadrupole Coupling Constants and other NMR Parameters in Liquids from the Combination of Molecular Dynamics Simulations and ab initio Calculations. eMagRes, 2007. doi: 10.1002/9780470034590.emrstm0003

Accurate Determination of Nuclear Quadrupole Coupling Constants and other NMR Parameters in Liquids from the Combination of Molecular Dynamics Simulations and ab initio Calculations

2007

Journal Article

Deterministic derivation of non-equilibrium free energy theorems for natural isothermal isobaric systems

Williams, Stephen R., Searles, Debra J. and Evans, Denis J. (2007). Deterministic derivation of non-equilibrium free energy theorems for natural isothermal isobaric systems. Molecular Physics, 105 (8), 1059-1066. doi: 10.1080/00268970701278393

Deterministic derivation of non-equilibrium free energy theorems for natural isothermal isobaric systems

2007

Journal Article

Effect of terminal amino acids on the stability and specificity of PNA-DNA hybridisation

Silvester, Nicole C., Bushell, G. R., Searles, Debra J. and Brown, Christopher L. (2007). Effect of terminal amino acids on the stability and specificity of PNA-DNA hybridisation. Organic & Biomolecular Chemistry, 5 (6), 917-923. doi: 10.1039/b615567g

Effect of terminal amino acids on the stability and specificity of PNA-DNA hybridisation

2006

Journal Article

Effect of solvation and confinement on the trans-gauche isomerization reaction in n-butane

Travis, Karl P. and Searles, Debra J. (2006). Effect of solvation and confinement on the trans-gauche isomerization reaction in n-butane. Journal of Chemical Physics, 125 (16 Article No.164501) 164501, 164501. doi: 10.1063/1.2363380

Effect of solvation and confinement on the trans-gauche isomerization reaction in n-butane

2006

Journal Article

Numerical study of the steady state fluctuation relations far from equilibrium

Williams, Stephen R., Searles, Debra J. and Evans, Denis J. (2006). Numerical study of the steady state fluctuation relations far from equilibrium. Journal of Chemical Physics, 124 (19 Article No. 194102) 194102, 194102. doi: 10.1063/1.2196411

Numerical study of the steady state fluctuation relations far from equilibrium

2006

Journal Article

Chaotic properties of planar elongational flow and planar shear flow: lyapunov exponents, conjugate-pairing rule, and phase space contraction

Frascoli, Federico, Searles, Debra J. and Todd, B. D. (2006). Chaotic properties of planar elongational flow and planar shear flow: lyapunov exponents, conjugate-pairing rule, and phase space contraction. Physical Review E, 73 (4 Article No. 046206) 046206. doi: 10.1103/PhysRevE.73.046206

Chaotic properties of planar elongational flow and planar shear flow: lyapunov exponents, conjugate-pairing rule, and phase space contraction