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2019 Journal Article Exome sequencing of oral leukoplakia and oral squamous cell carcinoma implicates DNA damage repair gene defects in malignant transformationFarah, Camile S., Jessri, Maryam, Bennett, Nigel C., Dalley, Andrew J., Shearston, Kate D. and Fox, Simon A. (2019). Exome sequencing of oral leukoplakia and oral squamous cell carcinoma implicates DNA damage repair gene defects in malignant transformation. Oral Oncology, 96, 42-50. doi: 10.1016/j.oraloncology.2019.07.005 |
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2019 Journal Article LobSig is a multigene predictor of outcome in invasive lobular carcinomaMcCart Reed, Amy E., Lal, Samir, Kutasovic, Jamie R., Wockner, Leesa, Robertson, Alan, de Luca, Xavier M., Kalita-de Croft, Priyakshi, Dalley, Andrew J., Coorey, Craig P., Kuo, Luyu, Ferguson, Kaltin, Niland, Colleen, Miller, Gregory, Johnson, Julie, Reid, Lynne E., Males, Renique, Saunus, Jodi M., Chenevix-Trench, Georgia, Coin, Lachlan, Lakhani, Sunil R. and Simpson, Peter T. (2019). LobSig is a multigene predictor of outcome in invasive lobular carcinoma. npj Breast Cancer, 5 (1) 18, 18. doi: 10.1038/s41523-019-0113-y |
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2019 Journal Article Secreted cellular prion protein binds doxorubicin and correlates with anthracycline resistance in breast cancerWiegmans, Adrian P., Saunus, Jodi M., Ham, Sunyoung, Lobb, Richard J., Kutasovic, Jamie R., Dalley, Andrew J., Miranda, Mariska, Atkinson, Caroline, Foliaki, Simote T., Ferguson, Kaltin, Niland, Colleen, Johnstone, Cameron N., Lewis, Victoria, Collins, Steven, Lakhani, Sunil R., Al-Ejeh, Fares and Möller, Andreas (2019). Secreted cellular prion protein binds doxorubicin and correlates with anthracycline resistance in breast cancer. JCI Insight, 5 (6) e124092. doi: 10.1172/jci.insight.124092 |
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2019 Journal Article Diff-Quik cytology smears from endobronchial ultrasound transbronchial needle aspiration lymph node specimens as a source of DNA for next-generation sequencing instead of cell blocksFielding, David, Dalley, Andrew J., Bashirzadeh, Farzad, Singh, Mahendra, Nandakumar, Lakshmy, McCart Reed, Amy E., Black, Debra, Kazakoff, Stephen, Pearson, John V., Nones, Katia, Waddell, Nicola, Lakhani, Sunil R. and Simpson, Peter T. (2019). Diff-Quik cytology smears from endobronchial ultrasound transbronchial needle aspiration lymph node specimens as a source of DNA for next-generation sequencing instead of cell blocks. Respiration, 97 (6), 1-14. doi: 10.1159/000495661 |
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2019 Conference Publication LobSig, a prognostic signature for Invasive Lobular CarcinomaMcCart Reed, Amy E., Lal, Samir, Kutasovic, Jamie R., Wockner, Leesa, Robertson, Alan, de Croft, Priyakshi Kalıta, Dalley, Andrew, Coorey, Craig P., Kuo, Luyu, Ferguson, Kaltin, Niland, Colleen, Miller, Gregory, Johnson, Julie, Reid, Lynne E., Males, Renique, Saunus, Jodi M., Chenevix-Trench, Georgia, Coin, Lachlan, Lakhani, Sunil R. and Simpson, Peter T. (2019). LobSig, a prognostic signature for Invasive Lobular Carcinoma. 7th International PacRim Breast and Prostate Cancer Meeting, Barossa Novotel, South Australia, Australia, 17-20 March 2019. |
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2019 Journal Article Breast cancer metastasis to gynaecological organs: a clinico‐pathological and molecular profiling studyKutasovic, Jamie R., McCart Reed, Amy E., Males, Renique, Sim, Sarah, Saunus, Jodi M., Dalley, Andrew, McEvoy, Christopher R., Dedina, Liana, Miller, Gregory, Peyton, Stephen, Reid, Lynne, Lal, Samir, Niland, Colleen, Ferguson, Kaltin, Fellowes, Andrew P., Al-Ejeh, Fares, Lakhani, Sunil R., Cummings, Margaret C. and Simpson, Peter T. (2019). Breast cancer metastasis to gynaecological organs: a clinico‐pathological and molecular profiling study. The Journal of Pathology: Clinical Research, 5 (1), 25-39. doi: 10.1002/cjp2.118 |
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2019 Conference Publication Abstract P1-19-05: establishment of a human neural progenitor cell microenvironment model to investigate signalling events in triple negative breast cancer brain metastases in a high-throughput settingChalmers, S.B., Dalley, A.J., Kalita-de Croft, P., Saunus, J., Bassett, J.J., Sadras, F., Roberts-Thomson, S.J. and Monteith, G.R. (2019). Abstract P1-19-05: establishment of a human neural progenitor cell microenvironment model to investigate signalling events in triple negative breast cancer brain metastases in a high-throughput setting. 2018 San Antonio Breast Cancer Symposium, San Antonio, TX, United States, 4-8 December 2018. Philadelphia, PA, United States: American Association for Cancer Research (AACR). doi: 10.1158/1538-7445.sabcs18-p1-19-05 |
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2018 Journal Article Transcriptome changes induced in vitro by alcohol-containing mouthwashes in normal and dysplastic oral keratinocytesFox, Simon A., Currie, Sean S., Dalley, Andrew J. and Farah, Camile S. (2018). Transcriptome changes induced in vitro by alcohol-containing mouthwashes in normal and dysplastic oral keratinocytes. Journal of Oral Pathology and Medicine , 47 (5), 511-518. doi: 10.1111/jop.12704 |
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2018 Journal Article Integrated miRNA-mRNA spatial signature for oral squamous cell carcinoma: a prospective profiling study of Narrow Band Imaging guided resectionFarah, Camile S., Fox, Simon A. and Dalley, Andrew J. (2018). Integrated miRNA-mRNA spatial signature for oral squamous cell carcinoma: a prospective profiling study of Narrow Band Imaging guided resection. Scientific Reports, 8 (1) 823, 1-13. doi: 10.1038/s41598-018-19341-x |
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2017 Journal Article Multidimensional phenotyping of breast cancer cell lines to guide preclinical researchSaunus, Jodi M., Smart, Chanel E., Kutasovic, Jamie R., Johnston, Rebecca L., Kalita-de Croft, Priyakshi, Miranda, Mariska, Rozali, Esdy N., Vargas, Ana Cristina, Reid, Lynne E., Lorsy, Eva, Cocciardi, Sibylle, Seidens, Tatjana, McCart Reed, Amy E., Dalley, Andrew J., Wockner, Leesa F., Johnson, Julie, Sarkar, Debina, Askarian-Amiri, Marjan E., Simpson, Peter T., Khanna, Kum Kum, Chenevix-Trench, Georgia, Al-Ejeh, Fares and Lakhani, Sunil R. (2017). Multidimensional phenotyping of breast cancer cell lines to guide preclinical research. Breast Cancer Research and Treatment, 167 (1), 1-13. doi: 10.1007/s10549-017-4496-x |
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2017 Journal Article Next-generation sequencing of endobronchial ultrasound transbronchial needle aspiration specimens in lung cancerFielding, David, Dalley, Andrew J., Bashirzadeh, Farzad, Singh, Mahendra, Nandakumar, Lakshmy, Reed, Amy E. McCart, Black, Debra, Kazakoff, Stephen, Nones, Katia, Pearson, John, Waddell, Nic, Lakhani, Sunil R. and Simpson, Peter T. (2017). Next-generation sequencing of endobronchial ultrasound transbronchial needle aspiration specimens in lung cancer. American Journal of Respiratory and Critical Care Medicine, 196 (3), 388-391. doi: 10.1164/rccm.201609-1935LE |
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2017 Journal Article Deficient double-strand break repair in oral squamous cell carcinoma cell linesJessri, Maryam, Dalley, Andrew J. and Farah, Camile S. (2017). Deficient double-strand break repair in oral squamous cell carcinoma cell lines. Journal of Oral Pathology & Medicine, 46 (9), 695-702. doi: 10.1111/jop.12576 |
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2017 Conference Publication Diffquik Stained Cytology Smears Provide Improved Malignant Cell Dna Yields From Lymph Nodes At Endobronchial Ultrasound Transbronchial Needle Aspiration (Ebus-Tbna)Fielding, D., Dalley, A., Bashirzadeh, F., Singh, M., Nandakumar, L., Reed, McCart A., Black, D., Waddell, N., Kazakoff, Stephen, Nones, Katia, Pearson, John, Lakhani, S. and Simpson, P. (2017). Diffquik Stained Cytology Smears Provide Improved Malignant Cell Dna Yields From Lymph Nodes At Endobronchial Ultrasound Transbronchial Needle Aspiration (Ebus-Tbna). ANZSRS/TSANZ Annual Scientific Meeting, Canberra, Australia, 24-28 March 2017. Richmond, VIC, Australia: Wiley-Blackwell. |
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2016 Conference Publication Next Generation Sequencing On Endobronchial Ultrasound Transbronchial Needle Aspirate Lymph Node Specimens in Lung Cancer Shows a High Incidence of Mutations and Consistency with Single Gene TestingFielding, D., Bashirzadeh, F., Singh, M., Nandakumar, L., Reed, Mccart A., Black, D., Dalley, A., Pearson, J., Nones, K., Waddell, N., Simpson, P. and Lakhani, S. (2016). Next Generation Sequencing On Endobronchial Ultrasound Transbronchial Needle Aspirate Lymph Node Specimens in Lung Cancer Shows a High Incidence of Mutations and Consistency with Single Gene Testing. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science, Annual Scientific Meeting, Perth, WA, Australia, 1-6 April 2016. Wiley. doi: 10.1111/resp.12754_12 |
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2015 Journal Article LGR5 expression in oral epithelial dysplasia and oral squamous cell carcinomaDalley, Andrew J., Abdul Majeed, Ahmad A., Pitty, Luke P., Major, Aidan G. and Farah, Camile S. (2015). LGR5 expression in oral epithelial dysplasia and oral squamous cell carcinoma. Oral Surgery, Oral Medicine, Oral Pathology and Oral Radiology, 119 (4), 436-440.e1. doi: 10.1016/j.oooo.2014.11.014 |
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2015 Journal Article Improved surgical margin definition by Narrow Band Imaging for resection of oral squamous cell carcinoma: a prospective gene expression profiling studyFarah, Camile S., Dalley, Andrew J., Nguyen, Phan, Batstone, Martin, Kordbacheh, Farzaneh, Perry-Keene, Joanna and Fielding, David (2015). Improved surgical margin definition by Narrow Band Imaging for resection of oral squamous cell carcinoma: a prospective gene expression profiling study. Head and Neck, 38 (6), 832-839. doi: 10.1002/hed.23989 |
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2015 Journal Article hMSH6: a potential diagnostic marker for oral carcinoma in situJessri, Maryam, Dalley, Andrew J. and Farah, Camile S. (2015). hMSH6: a potential diagnostic marker for oral carcinoma in situ. Journal of Clinical Pathology, 68 (1), 86-90. doi: 10.1136/jclinpath-2014-202411 |
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2015 Book Chapter Next generation sequencing applications in head and neck oncologyFarah, Camile S., Jessri, Maryam, Kordbacheh, Farzaneh, Bennett, Nigel C. and Dalley, Andrew (2015). Next generation sequencing applications in head and neck oncology. Next generation sequencing in cancer research, volume 2: from basepairs to bedside. (pp. 401-422) edited by Wei Wu and Hani Choudhry. New York, NY, United States: Springer. doi: 10.1007/978-3-319-15811-2_23 |
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2014 Journal Article Expression of ABCG2 and Bmi-1 in oral potentially malignant lesions and oral squamous cell carcinomaDalley, Andrew J., Pitty, Luke P., Major, Aidan G., AbdulMajeed, Ahmad A. and Farah, Camile S. (2014). Expression of ABCG2 and Bmi-1 in oral potentially malignant lesions and oral squamous cell carcinoma. Cancer Medicine, 3 (2), 273-283. doi: 10.1002/cam4.182 |
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2014 Journal Article MutSα and MutLα immunoexpression analysis in diagnostic grading of oral epithelial dysplasia and squamous cell carcinomaJessri, M., Dalley, A. J. and Farah, C. S. (2014). MutSα and MutLα immunoexpression analysis in diagnostic grading of oral epithelial dysplasia and squamous cell carcinoma. Oral Surgery, Oral Medicine, Oral Pathology and Oral Radiology, 119 (1), 74-82. doi: 10.1016/j.oooo.2014.06.017 |
