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2025 Journal Article PIRT-Seq: a high-resolution whole-genome assay to identify protein-coding genesGoodall, Emily C. A., Hodges, Freya, Kok, Weine, Permana, Budi, Cuddihy, Thom, Yang, Zihao, Kahler, Nicole, Shires, Kenneth, Pullela, Karthik, Torres, Von Vergel L., Rooke, Jessica L., Delhaye, Antoine, Collet, Jean-François, Bryant, Jack A., Forde, Brian M., Hemm, Matthew R. and Henderson, Ian R. (2025). PIRT-Seq: a high-resolution whole-genome assay to identify protein-coding genes. Nucleic Acids Research, 53 (15) gkaf774, 1-16. doi: 10.1093/nar/gkaf774 |
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2025 Journal Article Loss of cardiolipin and porins bypasses the essentiality of the sigma E cell envelope stress response in Escherichia coliYang, Zihao, Goodall, Emily C. A., Zhang, Bing, Torres, Von V. L., Rooke, Jessica L., Pullela, Karthik, Da Costa, Rochelle M., Icke, Christopher, Blaskovich, Mark A.T., Legood, Simon, Cunningham, Adam F., Vollmer, Waldemar, Bryant, Jack A. and Henderson, Ian R. (2025). Loss of cardiolipin and porins bypasses the essentiality of the sigma E cell envelope stress response in Escherichia coli. mBio, 16 (9) e01613-25, e0161325. doi: 10.1128/mbio.01613-25 |
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2024 Journal Article Genome-wide fitness analysis of Salmonella enterica reveals aroA mutants are attenuated due to iron restriction in vitroRooke, Jessica L., Goodall, Emily C. A., Pullela, Karthik, Da Costa, Rochelle, Martinelli, Nicole, Smith, Chelsie, Mora, Maria, Cunningham, Adam F. and Henderson, Ian R. (2024). Genome-wide fitness analysis of Salmonella enterica reveals aroA mutants are attenuated due to iron restriction in vitro. mBio, 15 (10), 1-17. doi: 10.1128/mbio.03319-23 |
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2024 Journal Article Type 5 secretion system antigens as vaccines against Gram-negative bacterial infectionsDa Costa, Rochelle M., Rooke, Jessica L., Wells, Timothy J., Cunningham, Adam F. and Henderson, Ian R. (2024). Type 5 secretion system antigens as vaccines against Gram-negative bacterial infections. npj Vaccines, 9 (1) 159, 159. doi: 10.1038/s41541-024-00953-6 |
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2024 Journal Article Transposon mutagenesis screen in Klebsiella pneumoniae identifies genetic determinants required for growth in human urine and serumGray, Jessica, Torres, Von Vergel L., Goodall, Emily, McKeand, Samantha A., Scales, Danielle, Collins, Christy, Wetherall, Laura, Lian, Zheng Jie, Bryant, Jack A., Milner, Matthew T., Dunne, Karl A., Icke, Christopher, Rooke, Jessica L., Schneiders, Thamarai, Lund, Peter A., Cunningham, Adam F., Cole, Jeff A. and Henderson, Ian R. (2024). Transposon mutagenesis screen in Klebsiella pneumoniae identifies genetic determinants required for growth in human urine and serum. eLife, 12 RP88971, 1-27. doi: 10.7554/elife.88971.3 |
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2021 Journal Article Loss of YhcB results in dysregulation of coordinated peptidoglycan, LPS and phospholipid synthesis during Escherichia coli cell growthGoodall, Emily C. A., Isom, Georgia L., Rooke, Jessica L., Pullela, Karthik, Icke, Christopher, Yang, Zihao, Boelter, Gabriela, Jones, Alun, Warner, Isabel, Da Costa, Rochelle, Zhang, Bing, Rae, James, Tan, Wee Boon, Winkle, Matthias, Delhaye, Antoine, Heinz, Eva, Collet, Jean-Francois, Cunningham, Adam F., Blaskovich, Mark A., Parton, Robert G., Cole, Jeff A., Banzhaf, Manuel, Chng, Shu-Sin, Vollmer, Waldemar, Bryant, Jack A. and Henderson, Ian R. (2021). Loss of YhcB results in dysregulation of coordinated peptidoglycan, LPS and phospholipid synthesis during Escherichia coli cell growth. PLoS Genetics, 17 (12) e1009586, 1-40. doi: 10.1371/journal.pgen.1009586 |
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2021 Journal Article BamA and BamD are essential for the secretion of trimeric autotransporter adhesinsRooke, Jessica L., Icke, Christopher, Wells, Timothy J, Rossiter, Amanda E., Browning, Douglas F., Morris, Faye C., Leo, Jack C., Schütz, Monika S., Autenrieth, Ingo B., Cunningham, Adam F., Linke, Dirk and Henderson, Ian R. (2021). BamA and BamD are essential for the secretion of trimeric autotransporter adhesins. Frontiers in Microbiology, 12 628879, 1-10. doi: 10.3389/fmicb.2021.628879 |
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2020 Journal Article Mice deficient in T-bet form inducible NO synthase-positive granulomas that fail to constrain SalmonellaPerez-Toledo, Marisol, Beristain-Covarrubias, Nonantzin, Channell, William M., Hitchcock, Jessica R., Cook, Charlotte N., Coughlan, Ruth E., Bobat, Saeeda, Jones, Nicholas D., Nakamura, Kyoko, Ross, Ewan A., Rossiter, Amanda E., Rooke, Jessica, Garcia-Gimenez, Alicia, Jossi, Sian, Persaud, Ruby R., Marcial-Juarez, Edith, Flores-Langarica, Adriana, Henderson, Ian R., Withers, David R., Watson, Steve P. and Cunningham, Adam F. (2020). Mice deficient in T-bet form inducible NO synthase-positive granulomas that fail to constrain Salmonella. Journal of Immunology, 205 (3), 708-719. doi: 10.4049/jimmunol.2000089 |
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2018 Journal Article YraP Contributes to Cell Envelope Integrity and Virulence of Salmonella enterica Serovar TyphimuriumMorris, Faye C., Wells, Timothy J., Bryant, Jack A., Schager, Anna E., Sevastsyanovich, Yanina R., Squire, Derrick J. P., Marshall, Jennifer, Isom, Georgia L., Rooke, Jessica, Maderbocus, Riyaz, Knowles, Timothy J., Overduin, Michael, Rossiter, Amanda E., Cunningham, Adam F. and Henderson, Ian R. (2018). YraP Contributes to Cell Envelope Integrity and Virulence of Salmonella enterica Serovar Typhimurium. Infection and Immunity, 86 (11) e00829-17. doi: 10.1128/IAI.00829-17 |
