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2021 Journal Article Systematic analysis of differential rhythmic liver gene expression mediated by the circadian clock and feeding rhythmsWeger, Benjamin D., Gobet, Cédric, David, Fabrice P. A., Atger, Florian, Martin, Eva, Phillips, Nicholas E., Charpagne, Aline, Weger, Meltem, Naef, Felix and Gachon, Frédéric (2021). Systematic analysis of differential rhythmic liver gene expression mediated by the circadian clock and feeding rhythms. Proceedings of the National Academy of Sciences, 118 (3) e2015803118, 1-12. doi: 10.1073/pnas.2015803118 |
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2019 Journal Article The mouse microbiome is required for sex-specific diurnal rhythms of gene expression and metabolismWeger, Benjamin D, Gobet, Cédric, Yeung, Jake, Martin, Eva, Jimenez, Sonia, Betrisey, Bertrand, Foata, Francis, Berger, Bernard, Balvay, Aurélie, Foussier, Anne, Charpagne, Aline, Boizet-Bonhoure, Brigitte, Chou, Chieh Jason, Naef, Felix and Gachon, Frédéric (2019). The mouse microbiome is required for sex-specific diurnal rhythms of gene expression and metabolism. Cell Metabolism, 29 (2), 362-382. doi: 10.1016/j.cmet.2018.09.023 |
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2024 Journal Article The effect of an improved ICU physical environment on outcomes and post-ICU recovery—a protocolTronstad, Oystein, Zangerl, Barbara, Patterson, Sue, Flaws, Dylan, Yerkovich, Stephanie, Szollosi, Irene, White, Nicole, Garcia-Hansen, Veronica, Leonard, Francisca Rodriguez, Weger, Benjamin D., Gachon, Frédéric, Brain, David, Lavana, Jayshree, Hodgson, Carol and Fraser, John F. (2024). The effect of an improved ICU physical environment on outcomes and post-ICU recovery—a protocol. Trials, 25 (1) 376. doi: 10.1186/s13063-024-08222-6 |
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2024 Journal Article Maternal high fat diet induces circadian clock-independent endocrine alterations impacting the metabolism of the offspringDing, Lu, Weger, Benjamin D., Liu, Jieying, Zhou, Liyuan, Lim, Yenkai, Wang, Dongmei, Xie, Ziyan, Liu, Jing, Ren, Jing, Zheng, Jia, Zhang, Qian, Yu, Miao, Weger, Meltem, Morrison, Mark, Xiao, Xinhua and Gachon, Frédéric (2024). Maternal high fat diet induces circadian clock-independent endocrine alterations impacting the metabolism of the offspring. iScience, 27 (7) 110343, 110343. doi: 10.1016/j.isci.2024.110343 |
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2023 Journal Article Understanding circadian dynamics: current progress and future directions for chronobiology in drug discoveryWeger, Meltem, Weger, Benjamin D. and Gachon, Frédéric (2023). Understanding circadian dynamics: current progress and future directions for chronobiology in drug discovery. Expert Opinion on Drug Discovery, 18 (8), 893-901. doi: 10.1080/17460441.2023.2224554 |
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2023 Journal Article Mice with humanized livers reveal the role of hepatocyte clocks in rhythmic behaviorDelbès, Anne-Sophie, Quiñones, Mar, Gobet, Cédric, Castel, Julien, Denis, Raphaël G. P., Berthelet, Jérémy, Weger, Benjamin D., Challet, Etienne, Charpagne, Aline, Metairon, Sylviane, Piccand, Julie, Kraus, Marine, Rohde, Bettina H., Bial, John, Wilson, Elizabeth M., Vedin, Lise-Lotte, Minniti, Mirko E., Pedrelli, Matteo, Parini, Paolo, Gachon, Frédéric and Luquet, Serge (2023). Mice with humanized livers reveal the role of hepatocyte clocks in rhythmic behavior. Science Advances, 9 (20) eadf2982, 1-14. doi: 10.1126/sciadv.adf2982 |
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2023 Journal Article Multiomics reveals multilevel control of renal and systemic metabolism by the renal tubular circadian clockBignon, Yohan, Wigger, Leonore, Ansermet, Camille, Weger, Benjamin D., Lagarrigue, Sylviane, Centeno, Gabriel, Durussel, Fanny, Götz, Lou, Ibberson, Mark, Pradervand, Sylvain, Quadroni, Manfredo, Weger, Meltem, Amati, Francesca, Gachon, Frédéric and Firsov, Dmitri (2023). Multiomics reveals multilevel control of renal and systemic metabolism by the renal tubular circadian clock. Journal of Clinical Investigation, 133 (8) e167133, 1-17. doi: 10.1172/JCI167133 |
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2022 Journal Article Comprehensive analysis of the circadian nuclear and cytoplasmic transcriptome in mouse liverHurni, Clémence, Weger, Benjamin D., Gobet, Cédric and Naef, Felix (2022). Comprehensive analysis of the circadian nuclear and cytoplasmic transcriptome in mouse liver. PLOS Genetics, 18 (8) e1009903, e1009903. doi: 10.1371/journal.pgen.1009903 |
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2022 Journal Article Disruption of the circadian clock component BMAL1 elicits an endocrine adaption impacting on insulin sensitivity and liver diseaseJouffe, Céline, Weger, Benjamin D., Martin, Eva, Atger, Florian, Weger, Meltem, Gobet, Cédric, Ramnath, Divya, Charpagne, Aline, Morin-Rivron, Delphine, Powell, Elizabeth E., Sweet, Matthew J., Masoodi, Mojgan, Uhlenhaut, N. Henriette and Gachon, Frédéric (2022). Disruption of the circadian clock component BMAL1 elicits an endocrine adaption impacting on insulin sensitivity and liver disease. Proceedings of the National Academy of Sciences, 119 (10) e2200083119, e2200083119. doi: 10.1073/pnas.2200083119 |
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2022 Journal Article The mechanisms and physiological consequences of diurnal hepatic cell size fluctuations: a brief reviewWeger, Meltem, Weger, Benjamin D. and Gachon, Frédéric (2022). The mechanisms and physiological consequences of diurnal hepatic cell size fluctuations: a brief review. Cellular Physiology and Biochemistry, 56 (S2), 1-11. doi: 10.33594/000000489 |
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2021 Journal Article The Insulin/Insulin‐like Growth Factor signaling connects metabolism with sexual differentiationWeger, Benjamin D. and Gachon, Frédéric (2021). The Insulin/Insulin‐like Growth Factor signaling connects metabolism with sexual differentiation. Acta Physiologica, 231 (3) e13576, e13576. doi: 10.1111/apha.13576 |
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2020 Journal Article Neuronal activity regulates blood-brain barrier efflux transport through endothelial circadian genesPulido, Robert S., Munji, Roeben N., Chan, Tamara C., Quirk, Clare R., Weiner, Geoffrey A., Weger, Benjamin D., Rossi, Meghan J., Elmsaouri, Sara, Malfavon, Mario, Deng, Aaron, Profaci, Caterina P., Blanchette, Marie, Qian, Tongcheng, Foreman, Koji L., Shusta, Eric V., Gorman, Michael R., Gachon, Frédéric, Leutgeb, Stefan and Daneman, Richard (2020). Neuronal activity regulates blood-brain barrier efflux transport through endothelial circadian genes. Neuron, 108 (5), 937-952.e7. doi: 10.1016/j.neuron.2020.09.002 |
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2020 Journal Article MondoA regulates gene expression in cholesterol biosynthesis-associated pathways required for zebrafish epibolyWeger, Meltem, Weger, Benjamin D, Schink, Andrea, Takamiya, Masanari, Stegmaier, Johannes, Gobet, Cédric, Parisi, Alice, Kobitski, Andrei Yu, Mertes, Jonas, Krone, Nils, Strähle, Uwe, Nienhaus, Gerd Ulrich, Mikut, Ralf, Gachon, Frédéric, Gut, Philipp and Dickmeis, Thomas (2020). MondoA regulates gene expression in cholesterol biosynthesis-associated pathways required for zebrafish epiboly. eLife, 9 e57068, 1-35. doi: 10.7554/elife.57068 |
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2020 Journal Article Pax6 organizes the anterior eye segment by guiding two distinct neural crest wavesTakamiya, Masanari, Stegmaier, Johannes, Kobitski, Andrei Yu, Schott, Benjamin, Weger, Benjamin D., Margariti, Dimitra, Cereceda Delgado, Angel R., Gourain, Victor, Scherr, Tim, Yang, Lixin, Sorge, Sebastian, Otte, Jens C., Hartmann, Volker, van Wezel, Jos, Stotzka, Rainer, Reinhard, Thomas, Schlunck, Günther, Dickmeis, Thomas, Rastegar, Sepand, Mikut, Ralf, Nienhaus, Gerd Ulrich and Strähle, Uwe (2020). Pax6 organizes the anterior eye segment by guiding two distinct neural crest waves. PLoS Genetics , 16 (6) e1008774, e1008774. doi: 10.1371/journal.pgen.1008774 |
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2020 Journal Article Robust landscapes of ribosome dwell times and aminoacyl-tRNAs in response to nutrient stress in liverGobet, Cédric, Weger, Benjamin Dieter, Marquis, Julien, Martin, Eva, Neelagandan, Nagammal, Gachon, Frédéric and Naef, Felix (2020). Robust landscapes of ribosome dwell times and aminoacyl-tRNAs in response to nutrient stress in liver. Proceedings of the National Academy of Sciences, 117 (17), 9630-9641. doi: 10.1073/pnas.1918145117 |
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2019 Journal Article At the intersection of microbiota and circadian clock: are sexual dimorphism and growth hormones the missing link to pathology? Circadian clock and microbiota: potential egffect on growth hormone and sexual developmentWeger, Benjamin D., Rawashdeh, Oliver and Gachon, Frédéric (2019). At the intersection of microbiota and circadian clock: are sexual dimorphism and growth hormones the missing link to pathology? Circadian clock and microbiota: potential egffect on growth hormone and sexual development. BioEssays, 41 (9) 1900059, e1900059. doi: 10.1002/bies.201900059 |
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2019 Journal Article Circadian regulation of cochlear sensitivity to noise by circulating glucocorticoidsCederroth, Christopher R., Park, Jung-sub, Basinou, Vasiliki, Weger, Benjamin D., Tserga, Evangelia, Sarlus, Heela, Magnusson, Anna K., Kadri, Nadir, Gachon, Frédéric and Canlon, Barbara (2019). Circadian regulation of cochlear sensitivity to noise by circulating glucocorticoids. Current Biology, 29 (15), 2477-2487.e6. doi: 10.1016/j.cub.2019.06.057 |
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2019 Journal Article Microbiota and the clock: sexual dimorphism matters!Weger, Benjamin D and Gachon, Frédéric (2019). Microbiota and the clock: sexual dimorphism matters!. Aging, 11 (12), 3893-3894. doi: 10.18632/aging.102051 |
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2019 Journal Article Publisher correction: Menstrual cycle rhythmicity: metabolic patterns in healthy women (Scientific Reports, (2018), 8, 1, (14568), 10.1038/s41598-018-32647-0)Draper, C. F., Duisters, K., Weger, B., Chakrabarti, A., Harms, A. C., Brennan, L., Hankemeier, T., Goulet, L., Konz, T., Martin, F. P., Moco, S. and van der Greef, J. (2019). Publisher correction: Menstrual cycle rhythmicity: metabolic patterns in healthy women (Scientific Reports, (2018), 8, 1, (14568), 10.1038/s41598-018-32647-0). Scientific Reports, 9 (1) 5797, 5797. doi: 10.1038/s41598-019-41392-x |
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2018 Journal Article PGC1α and exercise adaptations in zebrafishParisi, Alice, Blattmann, Peter, Lizzo, Giulia, Stutz, Vivienne, Strohm, Laura, Richard, Joy, Civiletto, Gabriele, Charpagne, Aline, Raymond, Frederic, Gobet, Cedric, Weger, Benjamin, Migliavacca, Eugenia, Aebersold, Ruedi, Spiegelman, Bruce and Gut, Philipp (2018). PGC1α and exercise adaptations in zebrafish. BioRxiv. doi: 10.1101/483784 |
