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2025

Journal Article

SERS-ATB: A comprehensive database server for antibiotic SERS spectral visualization and deep-learning identification

Yuan, Quan, Tang, Jia-Wei, Chen, Jie, Liao, Yi-Wen, Zhang, Wen-Wen, Wen, Xin-Ru, Liu, Xin, Chen, Hui-Jin and Wang, Liang (2025). SERS-ATB: A comprehensive database server for antibiotic SERS spectral visualization and deep-learning identification. Environmental Pollution, 373 126083, 126083. doi: 10.1016/j.envpol.2025.126083

SERS-ATB: A comprehensive database server for antibiotic SERS spectral visualization and deep-learning identification

2025

Journal Article

Epidemiological characteristics of <i>Helicobacter pylori</i> infection and antibiotic resistance in urban areas of Guangdong Province, China: a multi-center, cross-sectional surveillance

Xian, Luhua, Si, Yuting, Luan, Luan, Lai, Jinxin, Tang, Jiawei and Wang, Liang (2025). Epidemiological characteristics of Helicobacter pylori infection and antibiotic resistance in urban areas of Guangdong Province, China: a multi-center, cross-sectional surveillance. European Journal of Clinical Microbiology & Infectious Diseases. doi: 10.1007/s10096-025-05105-9

Epidemiological characteristics of <i>Helicobacter pylori</i> infection and antibiotic resistance in urban areas of Guangdong Province, China: a multi-center, cross-sectional surveillance

2025

Journal Article

Reply to Bratchenko and Bratchenko, “Overestimation of the classification model for Raman spectroscopy data of biological samples”

Wen, Xin-Ru, Tang, Jia-Wei and Wang, Liang (2025). Reply to Bratchenko and Bratchenko, “Overestimation of the classification model for Raman spectroscopy data of biological samples”. mSystems, 10 (4). doi: 10.1128/msystems.00103-25

Reply to Bratchenko and Bratchenko, “Overestimation of the classification model for Raman spectroscopy data of biological samples”

2025

Journal Article

Rapid discrimination and ratio quantification of mixed antibiotics in aqueous solution through integrative analysis of SERS spectra via CNN combined with NN-EN model

Yuan, Quan, Yao, Lin-Fei, Tang, Jia-Wei, Ma, Zhang-Wen, Mou, Jing-Yi, Wen, Xin-Ru, Usman, Muhammad, Wu, Xiang and Wang, Liang (2025). Rapid discrimination and ratio quantification of mixed antibiotics in aqueous solution through integrative analysis of SERS spectra via CNN combined with NN-EN model. Journal of Advanced Research, 69, 61-74. doi: 10.1016/j.jare.2024.03.016

Rapid discrimination and ratio quantification of mixed antibiotics in aqueous solution through integrative analysis of SERS spectra via CNN combined with NN-EN model

2025

Journal Article

Application of machine learning-assisted surface-enhanced Raman spectroscopy in medical laboratories: Principles, opportunities, and challenges

Tang, Jia-Wei, Yuan, Quan, Zhang, Li, Marshall, Barry J., Yen Tay, Alfred Chin and Wang, Liang (2025). Application of machine learning-assisted surface-enhanced Raman spectroscopy in medical laboratories: Principles, opportunities, and challenges. TrAC - Trends in Analytical Chemistry, 184 118135, 118135-184. doi: 10.1016/j.trac.2025.118135

Application of machine learning-assisted surface-enhanced Raman spectroscopy in medical laboratories: Principles, opportunities, and challenges

2025

Journal Article

How can surface-enhanced Raman spectroscopy improve diagnostics for bacterial infections?

Tang, Jia-Wei, Wen, Xin-Ru, Liao, Yi-Wen and Wang, Liang (2025). How can surface-enhanced Raman spectroscopy improve diagnostics for bacterial infections?. Nanomedicine, 20 (7), 1-6. doi: 10.1080/17435889.2025.2466419

How can surface-enhanced Raman spectroscopy improve diagnostics for bacterial infections?

2025

Journal Article

Comparison of Raman spectroscopy with mass spectrometry for sequence typing of <i>Acinetobacter baumannii</i> strains: a single-center study

Liu, Suling, Zhang, Ni, Tang, Jiawei, Chen, Chong, Wang, Weisha, Zhou, Jingfang, Ye, Long, Chen, Xiaoli, Li, ZhengKang and Wang, Liang (2025). Comparison of Raman spectroscopy with mass spectrometry for sequence typing of Acinetobacter baumannii strains: a single-center study. Microbiology Spectrum, 13 (3), e0142524. doi: 10.1128/spectrum.01425-24

Comparison of Raman spectroscopy with mass spectrometry for sequence typing of <i>Acinetobacter baumannii</i> strains: a single-center study

2025

Journal Article

Discrimination of Benign and Malignant Thyroid Nodules through Comparative Analyses of Human Saliva Samples via Metabolomics and Deep-Learning-Guided Label-free SERS

Tang, Jia-Wei, Mou, Jing-Yi, Chen, Jie, Yuan, Quan, Wen, Xin-Ru, Liu, Qing-Hua, Liu, Zhao and Wang, Liang (2025). Discrimination of Benign and Malignant Thyroid Nodules through Comparative Analyses of Human Saliva Samples via Metabolomics and Deep-Learning-Guided Label-free SERS. ACS Applied Materials & Interfaces, 17 (3), 5538-5549. doi: 10.1021/acsami.4c20503

Discrimination of Benign and Malignant Thyroid Nodules through Comparative Analyses of Human Saliva Samples via Metabolomics and Deep-Learning-Guided Label-free SERS

2025

Journal Article

Rapid diagnosis and precision treatment of Helicobacter pylori infection in clinical settings

Umar, Zeeshan, Tang, Jia-Wei, Marshall, Barry J., Tay, Alfred Chin Yen and Wang, Liang (2025). Rapid diagnosis and precision treatment of Helicobacter pylori infection in clinical settings. Critical Reviews in Microbiology, 51 (2), 369-398. doi: 10.1080/1040841X.2024.2364194

Rapid diagnosis and precision treatment of Helicobacter pylori infection in clinical settings

2025

Journal Article

Rapid diagnosis of bacterial vaginosis using machine-learning-assisted surface-enhanced Raman spectroscopy of human vaginal fluids

Wen, Xin-Ru, Tang, Jia-Wei, Chen, Jie, Chen, Hui-Min, Usman, Muhammad, Yuan, Quan, Tang, Yu-Rong, Zhang, Yu-Dong, Chen, Hui-Jin and Wang, Liang (2025). Rapid diagnosis of bacterial vaginosis using machine-learning-assisted surface-enhanced Raman spectroscopy of human vaginal fluids. Msystems, 10 (1) e0105824, 1-18. doi: 10.1128/msystems.01058-24

Rapid diagnosis of bacterial vaginosis using machine-learning-assisted surface-enhanced Raman spectroscopy of human vaginal fluids

2024

Journal Article

Comparative analysis of bioactive ingredients and medicinal functions of natural and cultivated Ophiocordyceps sinensis (Berk.)

Ma, Zhangwen, Liu, Qinghua, Hong, Yongxuan, Chen, Jie, Tang, Jiawei, Tang, Yurong and Wang, Liang (2024). Comparative analysis of bioactive ingredients and medicinal functions of natural and cultivated Ophiocordyceps sinensis (Berk.). Future Integrative Medicine, 3 (4), 251-261. doi: 10.14218/fim.2024.00047

Comparative analysis of bioactive ingredients and medicinal functions of natural and cultivated Ophiocordyceps sinensis (Berk.)

2024

Journal Article

Rapid profiling of carcinogenic types of Helicobacter pylori infection via deep learning analysis of label-free SERS spectra of human serum

Li, Fen, Si, Yu-Ting, Tang, Jia-Wei, Umar, Zeeshan, Xiong, Xue-Song, Wang, Jin-Ting, Yuan, Quan, Tay, Alfred Chin Yen, Chua, Eng Guan, Zhang, Li, Marshall, Barry J., Yang, Wei-Xuan, Gu, Bing and Wang, Liang (2024). Rapid profiling of carcinogenic types of Helicobacter pylori infection via deep learning analysis of label-free SERS spectra of human serum. Computational and Structural Biotechnology Journal, 23, 3379-3390. doi: 10.1016/j.csbj.2024.09.008

Rapid profiling of carcinogenic types of Helicobacter pylori infection via deep learning analysis of label-free SERS spectra of human serum

2024

Journal Article

Comparative evaluation of BacT/ALERT VIRTUO and BACTEC FX400 blood culture systems for the detection of bloodstream infections

Qin, Yurong, Liao, Yiwen, Zhou, Jingfang, Liu, Weijiang, Chen, Huimin, Chen, Xiaoli, Wang, Weisha, Zhang, Ni, Zhao, Yunhu, Wang, Liang, Gu, Bing and Liu, Suling (2024). Comparative evaluation of BacT/ALERT VIRTUO and BACTEC FX400 blood culture systems for the detection of bloodstream infections. Microbiology Spectrum, 13 (1), e0185024. doi: 10.1128/spectrum.01850-24

Comparative evaluation of BacT/ALERT VIRTUO and BACTEC FX400 blood culture systems for the detection of bloodstream infections

2024

Journal Article

Identification of hypermucoviscous Klebsiella pneumoniae strains via untargeted surface-enhanced Raman spectroscopy

Zhang, Li-Yan, Tang, Jia-Wei, Tian, Ben-Shun, Huang, Yuanhong, Liu, Xiao-Yong, Zhao, Yue, Cui, Xu-Xia, Zhang, Xin-Yu, Qin, Yu-Rong, Li, Guang-Hua and Wang, Liang (2024). Identification of hypermucoviscous Klebsiella pneumoniae strains via untargeted surface-enhanced Raman spectroscopy. Analytical Methods, 16 (42), 7105-7113. doi: 10.1039/d4ay01137f

Identification of hypermucoviscous Klebsiella pneumoniae strains via untargeted surface-enhanced Raman spectroscopy

2024

Journal Article

Identification of chronic non-atrophic gastritis and intestinal metaplasia stages in the Correa's cascade through machine learning analyses of SERS spectral signature of non-invasively-collected human gastric fluid samples

Si, Yu-Ting, Xiong, Xue-Song, Wang, Jin-Ting, Yuan, Quan, Li, Yu-Ting, Tang, Jia-Wei, Li, Yong-Nian, Zhang, Xin-Yu, Li, Zheng-Kang, Lai, Jin-Xin, Umar, Zeeshan, Yang, Wei-Xuan, Li, Fen, Wang, Liang and Gu, Bing (2024). Identification of chronic non-atrophic gastritis and intestinal metaplasia stages in the Correa's cascade through machine learning analyses of SERS spectral signature of non-invasively-collected human gastric fluid samples. Biosensors and Bioelectronics, 262 116530. doi: 10.1016/j.bios.2024.116530

Identification of chronic non-atrophic gastritis and intestinal metaplasia stages in the Correa's cascade through machine learning analyses of SERS spectral signature of non-invasively-collected human gastric fluid samples

2024

Journal Article

Label-free surface-enhanced Raman spectroscopy coupled with machine learning algorithms in pathogenic microbial identification: current trends, challenges, and perspectives

Tang, Jia-Wei, Yuan, Quan, Wen, Xin-Ru, Usman, Muhammad, Tay, Alfred Chin Yen and Wang, Liang (2024). Label-free surface-enhanced Raman spectroscopy coupled with machine learning algorithms in pathogenic microbial identification: current trends, challenges, and perspectives. Interdisciplinary Medicine, 2 (3) e20230060. doi: 10.1002/INMD.20230060

Label-free surface-enhanced Raman spectroscopy coupled with machine learning algorithms in pathogenic microbial identification: current trends, challenges, and perspectives

2024

Journal Article

Pseudo-Siamese network combined with label-free Raman spectroscopy for the quantification of mixed trace amounts of antibiotics in human milk: A feasibility study

Mou, Jing-Yi, Usman, Muhammad, Tang, Jia-Wei, Yuan, Quan, Ma, Zhang-Wen, Wen, Xin-Ru, Liu, Zhao and Wang, Liang (2024). Pseudo-Siamese network combined with label-free Raman spectroscopy for the quantification of mixed trace amounts of antibiotics in human milk: A feasibility study. Food Chemistry: X, 22 101507, 22. doi: 10.1016/j.fochx.2024.101507

Pseudo-Siamese network combined with label-free Raman spectroscopy for the quantification of mixed trace amounts of antibiotics in human milk: A feasibility study

2024

Journal Article

Overview of nanoparticles for the rapid diagnosis and effective treatment of bacterial pathogens in clinical settings

Usman, Muhammad, Tang, Yu-Rong, Du, Yan, Yuan, Quan, Wen, Xin-Ru, Tang, Jia-Wei, Wang, Ji-Liang, Zhang, Xiao and Wang, Liang (2024). Overview of nanoparticles for the rapid diagnosis and effective treatment of bacterial pathogens in clinical settings. Physica Scripta, 99 (6) 062009, 062009-6. doi: 10.1088/1402-4896/ad4b66

Overview of nanoparticles for the rapid diagnosis and effective treatment of bacterial pathogens in clinical settings

2024

Journal Article

Multicentre, cross-sectional surveillance of Helicobacter pylori prevalence and antibiotic resistance to clarithromycin and levofloxacin in urban China using the string test coupled with quantitative PCR

Wang, Liang, Li, Zhengkang, Tay, Chin Yen, Marshall, Barry J, Gu, Bing, Tian, Yan, Dai, Xubo, Du, Hong, Dai, Qiong, Feng, Cui, Fang, Qi, Huang, Yanjiang, Hu, Yizhong, He, Min, Hu, Guochu, Huang, Hui, Li, Qixin, Liu, Mingbo, Li, Junhong, Luo, Jinhua, Lin, Zhifang, Li, Fen, Liu, Haitao, Xia, Dong, Man, Baohua, Ma, Jianhong, Tang, Shifu, Tang, Bofu, Wang, Jiliang ... Zhou, Bin (2024). Multicentre, cross-sectional surveillance of Helicobacter pylori prevalence and antibiotic resistance to clarithromycin and levofloxacin in urban China using the string test coupled with quantitative PCR. The Lancet Microbe, 5 (6), e512-e513. doi: 10.1016/S2666-5247(24)00027-2

Multicentre, cross-sectional surveillance of Helicobacter pylori prevalence and antibiotic resistance to clarithromycin and levofloxacin in urban China using the string test coupled with quantitative PCR

2024

Journal Article

A commensal protozoan attenuates Clostridioides difficile pathogenesis in mice via arginine-ornithine metabolism and host intestinal immune response

Yang, Huan, Wu, Xiaoxiao, Li, Xiao, Zang, Wanqing, Zhou, Zhou, Zhou, Yuan, Cui, Wenwen, Kou, Yanbo, Wang, Liang, Hu, Ankang, Wu, Lianlian, Yin, Zhinan, Chen, Quangang, Chen, Ying, Huang, Zhutao, Wang, Yugang and Gu, Bing (2024). A commensal protozoan attenuates Clostridioides difficile pathogenesis in mice via arginine-ornithine metabolism and host intestinal immune response. Nature Communications, 15 (1) 2842, 2842-1. doi: 10.1038/s41467-024-47075-0

A commensal protozoan attenuates Clostridioides difficile pathogenesis in mice via arginine-ornithine metabolism and host intestinal immune response