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2021 Journal Article Identification of genes associated with chapatti quality using transcriptome analysisSurvase, Abhijeet, Furtado, Agnelo, Thengane, Ratnakar and Henry, Robert (2021). Identification of genes associated with chapatti quality using transcriptome analysis. Journal of Cereal Science, 101 103276, 1-11. doi: 10.1016/j.jcs.2021.103276 |
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2021 Journal Article Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genesAnanda, Galaihalage, Norton, Sally, Blomstedt, Cecilia, Furtado, Agnelo, Møller, Birger, Gleadow, Roslyn and Henry, Robert (2021). Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genes. The Plant Genome, 14 (3) e20123, e20123. doi: 10.1002/tpg2.20123 |
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2021 Journal Article Fragrance in Pandanus amaryllifolius Roxb. Despite the presence of a betaine aldehyde dehydrogenase 2Bhatt, Vacha, Barvkar, Vitthal T., Furtado, Agnelo, Henry, Robert J. and Nadaf, Altafhusain (2021). Fragrance in Pandanus amaryllifolius Roxb. Despite the presence of a betaine aldehyde dehydrogenase 2. International Journal of Molecular Sciences, 22 (13) 6968, 1-18. doi: 10.3390/ijms22136968 |
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2021 Journal Article Improvements in the sequencing and assembly of plant genomesSharma, Priyanka, Al-Dossary, Othman, Alsubaie, Bader, Al-Mssallem, Ibrahim, Nath, Onkar, Mitter, Neena, Rodrigues Alves Margarido, Gabriel, Topp, Bruce, Murigneux, Valentine, Kharabian Masouleh, Ardashir, Furtado, Agnelo and Henry, Robert J. (2021). Improvements in the sequencing and assembly of plant genomes. Gigabyte, 2021, 1-10. doi: 10.46471/gigabyte.24 |
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2021 Journal Article Pests, diseases, and aridity have shaped the genome of Corymbia citriodoraHealey, Adam L., Shepherd, Mervyn, King, Graham J., Butler, Jakob B., Freeman, Jules S., Lee, David J., Potts, Brad M., Silva-Junior, Orzenil B., Baten, Abdul, Jenkins, Jerry, Shu, Shengqiang, Lovell, John T., Sreedasyam, Avinash, Grimwood, Jane, Furtado, Agnelo, Grattapaglia, Dario, Barry, Kerrie W., Hundley, Hope, Simmons, Blake A., Schmutz, Jeremy, Vaillancourt, René E. and Henry, Robert J. (2021). Pests, diseases, and aridity have shaped the genome of Corymbia citriodora. Communications Biology, 4 (1) 537, 1-13. doi: 10.1038/s42003-021-02009-0 |
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2021 Journal Article Association of gene expression with syringyl to guaiacyl ratio in sugarcane ligninHodgson-Kratky, K., Perlo, V., Furtado, A., Choudhary, H., Gladden, J. M., Simmons, B. A., Botha, F. and Henry, R. J. (2021). Association of gene expression with syringyl to guaiacyl ratio in sugarcane lignin. Plant Molecular Biology, 106 (1-2), 173-192. doi: 10.1007/s11103-021-01136-w |
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2020 Journal Article Comparison of long-read methods for sequencing and assembly of a plant genomeMurigneux, Valentine, Rai, Subash Kumar, Furtado, Agnelo, Bruxner, Timothy J. C., Tian, Wei, Harliwong, Ivon, Wei, Hanmin, Yang, Bicheng, Ye, Qianyu, Anderson, Ellis, Mao, Qing, Drmanac, Radoje, Wang, Ou, Peters, Brock A, Xu, Mengyang, Wu, Pei, Topp, Bruce, Coin, Lachlan J. M. and Henry, Robert J. (2020). Comparison of long-read methods for sequencing and assembly of a plant genome. GigaScience, 9 (12) giaa146. doi: 10.1093/gigascience/giaa146 |
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2020 Journal Article Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and rootsMason, Patrick J., Furtado, Agnelo, Marquardt, Annelie, Hodgson-Kratky, Katrina, Hoang, Nam V., Botha, Frederik C., Papa, Gabriella, Mortimer, Jenny C., Simmons, Blake and Henry, Robert J. (2020). Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots. Biotechnology for Biofuels, 13 (1) 201, 1-19. doi: 10.1186/s13068-020-01837-2 |
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2020 Journal Article Pathways of photosynthesis in non-leaf tissuesHenry, Robert J., Furtado, Agnelo and Rangan, Parimalan (2020). Pathways of photosynthesis in non-leaf tissues. Biology, 9 (12) 438, 1-13. doi: 10.3390/biology9120438 |
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2020 Journal Article Sequence variants linked to key traits in interspecific crosses between African and Asian riceBadro, Hayba, Ndjiondjop, Marie-Noelle, Furtado, Agnelo and Henry, Robert (2020). Sequence variants linked to key traits in interspecific crosses between African and Asian rice. Plants, 9 (12) 1653, 1-21. doi: 10.3390/plants9121653 |
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2020 Journal Article Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar contentPerlo, Virginie, Botha, Frederik C., Furtado, Agnelo, Hodgson‐Kratky, Katrina and Henry, Robert J. (2020). Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content. Plant Direct, 4 (11) e00276, e00276. doi: 10.1002/pld3.276 |
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2020 Journal Article Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice productionMoner, Ali Mohammad, Furtado, Agnelo and Henry, Robert J. (2020). Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice production. BMC Plant Biology, 20 (1) 472, 1-9. doi: 10.1186/s12870-020-02689-6 |
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2020 Journal Article Chromosome-scale assembly and annotation of the macadamia genome (Macadamia integrifolia HAES 741)Nock, Catherine J., Baten, Abdul, Mauleon, Ramil, Langdon, Kirsty S., Topp, Bruce, Hardner, Craig, Furtado, Agnelo, Henry, Robert J. and King, Graham J. (2020). Chromosome-scale assembly and annotation of the macadamia genome (Macadamia integrifolia HAES 741). G3: Genes, Genomes, Genetics, 10 (10), 3497-3504. doi: 10.1534/g3.120.401326 |
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2020 Journal Article Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioningCorrer, Fernando Henrique, Hosaka, Guilherme Kenichi, Barreto, Fernanda Zatti, Valadão, Isabella Barros, Balsalobre, Thiago Willian Almeida, Furtado, Agnelo, Henry, Robert James, Carneiro, Monalisa Sampaio and Margarido, Gabriel Rodrigues Alves (2020). Differential expression in leaves of Saccharum genotypes contrasting in biomass production provides evidence of genes involved in carbon partitioning. BMC Genomics, 21 (1) 673, 673. doi: 10.1186/s12864-020-07091-y |
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2020 Journal Article Wild sorghum as a promising resource for crop improvementAnanda, Galaihalage K. S., Myrans, Harry, Norton, Sally L., Gleadow, Roslyn, Furtado, Agnelo and Henry, Robert J. (2020). Wild sorghum as a promising resource for crop improvement. Frontiers in Plant Science, 11 1108, 1108. doi: 10.3389/fpls.2020.01108 |
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2020 Journal Article Slower development of lower canopy beans produces better coffeeCheng, Bing, Smyth, Heather E., Furtado, Agnelo and Henry, Robert J. (2020). Slower development of lower canopy beans produces better coffee. Journal of Experimental Botany, 71 (14), 4201-4214. doi: 10.1093/jxb/eraa151 |
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2020 Journal Article Structural elements that modulate the substrate specificity of plant purple acid phosphatases: avenues for improved phosphorus acquisition in cropsFeder, Daniel, McGeary, Ross P., Mitić, Natasa, Lonhienne, Thierry, Furtado, Agnelo, Schulz, Benjamin L., Henry, Robert J., Schmidt, Susanne, Guddat, Luke W. and Schenk, Gerhard (2020). Structural elements that modulate the substrate specificity of plant purple acid phosphatases: avenues for improved phosphorus acquisition in crops. Plant Science, 294 110445, 110445. doi: 10.1016/j.plantsci.2020.110445 |
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2020 Journal Article Transcriptome profiling of wheat genotypes under heat stress during grain-fillingRangan, Parimalan, Furtado, Agnelo and Henry, Robert (2020). Transcriptome profiling of wheat genotypes under heat stress during grain-filling. Journal of Cereal Science, 91 102895, 102895. doi: 10.1016/j.jcs.2019.102895 |
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2019 Journal Article Relationships between Iraqi rice varieties at the nuclear and plastid genome levelsBadro, Hayba, Furtado, Agnelo and Henry, Robert (2019). Relationships between Iraqi rice varieties at the nuclear and plastid genome levels. Plants, 8 (11) 481, 481. doi: 10.3390/plants8110481 |
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2019 Journal Article Relationship between sugarcane culm and leaf biomass composition and saccharification efficiencyHodgson-Kratky, K., Papa, G., Rodriguez, A., Stavila, V., Simmons, B., Botha, F., Furtado, A. and Henry, R. (2019). Relationship between sugarcane culm and leaf biomass composition and saccharification efficiency. Biotechnology for Biofuels, 12 (1) 247, 247. doi: 10.1186/s13068-019-1588-3 |
