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2025

Journal Article

Mutation in the rat interleukin 34 gene impacts macrophage development, homeostasis, and inflammation

Huang, Stephen, Patkar, Omkar L, Schulze, Sarah, Carter-Cusack, Dylan, Millard, Susan, Ranpura, Ginell, Green, Emma K, Maxwell, Emma, Kanesarajah, Jeeva, Cowin, Gary, Stimson, Damion, Kurniawan, Nyoman D, Keshvari, Sahar, Allavena, Rachel, Pettit, Allison R, Irvine, Katharine M and Hume, David A (2025). Mutation in the rat interleukin 34 gene impacts macrophage development, homeostasis, and inflammation. Life Science Alliance, 8 (9) e202503264, e202503264-9. doi: 10.26508/lsa.202503264

Mutation in the rat interleukin 34 gene impacts macrophage development, homeostasis, and inflammation

2025

Other Outputs

MRI protocols for imaging Burdekin Plums

Kurniawan, Nyoman (2025). MRI protocols for imaging Burdekin Plums. The University of Queensland. (Dataset) doi: 10.48610/57ebc66

MRI protocols for imaging Burdekin Plums

2025

Journal Article

Investigating the Role of Intravoxel Incoherent Motion Diffusion-Weighted Imaging in Evaluating Multiple Sclerosis Lesions

Alomair, Othman I., Alghamdi, Sami A., Abujamea, Abdullah H., AlfIfi, Ahmed Y., Alashban, Yazeed I. and Kurniawan, Nyoman D. (2025). Investigating the Role of Intravoxel Incoherent Motion Diffusion-Weighted Imaging in Evaluating Multiple Sclerosis Lesions. Diagnostics, 15 (10) 1260, 1260. doi: 10.3390/diagnostics15101260

Investigating the Role of Intravoxel Incoherent Motion Diffusion-Weighted Imaging in Evaluating Multiple Sclerosis Lesions

2025

Conference Publication

Automated 3D segmentation of glomeruli in human kidney tissue specimens using 16.4 T MRI without contrast agents

Amar, Aurel J., Kurniawan, Nyoman D., Cullen-McEwen, Luise A., Kassianos, Andrew J., Healy, Helen G., Bertram, John F., Chandra, Shekhar S. and Reutens, David C. (2025). Automated 3D segmentation of glomeruli in human kidney tissue specimens using 16.4 T MRI without contrast agents. 2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI), Houston, TX, United States, 14-17 April 2025. Piscataway, NJ, United States: IEEE. doi: 10.1109/isbi60581.2025.10980815

Automated 3D segmentation of glomeruli in human kidney tissue specimens using 16.4 T MRI without contrast agents

2025

Journal Article

The Hippo effector TEAD1 regulates postnatal murine cerebellar development

Atterton, Cooper, Pelenyi, Alexandra, Jones, Justin, Currey, Laura, Al-Khalily, Majd, Wright, Lucinda, Doonan, Mikki, Knight, David, Kurniawan, Nyoman D., Walters, Shaun, Thor, Stefan and Piper, Michael (2025). The Hippo effector TEAD1 regulates postnatal murine cerebellar development. Brain Structure and Function, 230 (3) 42, 42-3. doi: 10.1007/s00429-025-02903-x

The Hippo effector TEAD1 regulates postnatal murine cerebellar development

2025

Journal Article

Blue-lined octopus Hapalochlaena fasciata males envenomate females to facilitate copulation

Chung, Wen-Sung, Kurniawan, Nyoman D., Marshall, N. Justin and Cortesi, Fabio (2025). Blue-lined octopus Hapalochlaena fasciata males envenomate females to facilitate copulation. Current Biology, 35 (5), R169-R170. doi: 10.1016/j.cub.2025.01.027

Blue-lined octopus Hapalochlaena fasciata males envenomate females to facilitate copulation

2025

Other Outputs

Blue-lined octopus copulation

Chung, Wen-Sung and Kurniawan, Nyoman (2025). Blue-lined octopus copulation. The University of Queensland. (Dataset) doi: 10.48610/56cf71f

Blue-lined octopus copulation

2025

Other Outputs

16.4T MRI of nephrectomy sample - updated

Kurniawan, Nyoman and Amar, Aurel (2025). 16.4T MRI of nephrectomy sample - updated. The University of Queensland. (Dataset) doi: 10.48610/7da7765

16.4T MRI of nephrectomy sample - updated

2024

Other Outputs

16.4T MRI of nephrectomy sample and segmentation algorithm using shape recognition in python - superseded

Kurniawan, Nyoman (2024). 16.4T MRI of nephrectomy sample and segmentation algorithm using shape recognition in python - superseded. The University of Queensland. (Dataset) doi: 10.48610/88700ea

16.4T MRI of nephrectomy sample and segmentation algorithm using shape recognition in python - superseded

2024

Journal Article

Expression of the Hippo pathway effector, TEAD1, within the developing murine forebrain

Pelenyi, Alexandra, Atterton, Cooper, Jones, Justin, Currey, Laura, Al-Khalily, Majd, Wright, Lucinda, Kurniawan, Nyoman D., Thor, Stefan and Piper, Michael (2024). Expression of the Hippo pathway effector, TEAD1, within the developing murine forebrain. Gene Expression Patterns, 54 119384, 119384. doi: 10.1016/j.gep.2024.119384

Expression of the Hippo pathway effector, TEAD1, within the developing murine forebrain

2024

Conference Publication

An Inactivating Mutation in Rat IL-34 Reveals Redundant and Nonredundant Functions of CSF1-IL-34 Signalling in Homeostasis and Inflammation

Huang, Stephen, Patkar, Omkar, Schulze, Sarah, Carter-Cusack, Dylan, Ranpura, Ginell, Maxwell, Emma, Keshvari, Sahar, Millard, Susan, Cowin, Gary, Kurniawan, Nyoman, Pettit, Allison, Irvine, Katharine M. and Hume, David A. (2024). An Inactivating Mutation in Rat IL-34 Reveals Redundant and Nonredundant Functions of CSF1-IL-34 Signalling in Homeostasis and Inflammation. 66th ASH Annual Meeting, San Diego, CA, United States, 7-10 December 2024. Washington, DC, United States: American Society of Hematology. doi: 10.1182/blood-2024-208881

An Inactivating Mutation in Rat IL-34 Reveals Redundant and Nonredundant Functions of CSF1-IL-34 Signalling in Homeostasis and Inflammation

2024

Journal Article

Automated quality control of small animal MR neuroimaging data

Kalantari, Aref, Shahbazi, Mehrab, Schneider, Marc, Raikes, Adam C., Frazão, Victor Vera, Bhattrai, Avnish, Carnevale, Lorenzo, Diao, Yujian, Franx, Bart A. A., Gammaraccio, Francesco, Goncalves, Lisa-Marie, Lee, Susan, van Leeuwen, Esther M., Michalek, Annika, Mueller, Susanne, Olvera, Alejandro Rivera, Padro, Daniel, Selim, Mohamed Kotb, van der Toorn, Annette, Varriano, Federico, Vrooman, Roël, Wenk, Patricia, Albers, H. Elliott, Boehm-Sturm, Philipp, Budinger, Eike, Canals, Santiago, De Santis, Silvia, Brinton, Roberta Diaz, Dijkhuizen, Rick M. ... Aswendt, Markus (2024). Automated quality control of small animal MR neuroimaging data. Imaging Neuroscience, 2, 1-23. doi: 10.1162/imag_a_00317

Automated quality control of small animal MR neuroimaging data

2024

Journal Article

Polycomb repressive complex 2 is critical for mouse cortical glutamatergic neuron development

Currey, Laura, Mitchell, Benjamin, Al-Khalily, Majd, McElnea, Sarah-Jayne, Kozulin, Peter, Harkins, Danyon, Pelenyi, Alexandra, Fenlon, Laura, Suarez, Rodrigo, Kurniawan, Nyoman D, Burne, Thomas H., Harris, Lachlan, Thor, Stefan and Piper, Michael (2024). Polycomb repressive complex 2 is critical for mouse cortical glutamatergic neuron development. Cerebral Cortex, 34 (7) bhae268, 1-17. doi: 10.1093/cercor/bhae268

Polycomb repressive complex 2 is critical for mouse cortical glutamatergic neuron development

2024

Conference Publication

Application of Diffusion MRI to Characterize Connectome Changes Associated with EED Ablation

Alkhalily, Majd, Currey, Laura, Piper, Michael and Kurniawan, Nyoman (2024). Application of Diffusion MRI to Characterize Connectome Changes Associated with EED Ablation. 2023 ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Canada, 3-8 June 2023. Concord, CA United States: ISMRM. doi: 10.58530/2023/2685

Application of Diffusion MRI to Characterize Connectome Changes Associated with EED Ablation

2024

Conference Publication

An unsupervised deep learning-based method for in vivo high resolution Kidney MRI motion correction

Moinian, Shahrzad, Kurniawan, Nyoman, Chandra, Shekhar, Vegh, Viktor and Reutens, David (2024). An unsupervised deep learning-based method for in vivo high resolution Kidney MRI motion correction. 2023 ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, ON, Canada, 3-8 June 2023. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2023/4915

An unsupervised deep learning-based method for in vivo high resolution Kidney MRI motion correction

2024

Conference Publication

The Influence of b value and Resolution on MR Tractography and Connectome Construction in Adult Mouse Brain at 16.4 Tesla

Alkhalily, Majd, Currey, Laura, Piper, Michael and Kurniawan, Nyoman (2024). The Influence of b value and Resolution on MR Tractography and Connectome Construction in Adult Mouse Brain at 16.4 Tesla. 2023 ISMRM & ISMRT Annual Meeting & Exhibition, Toronto, Canada, 3-8 June 2023. Concord, CA United States: ISMRM. doi: 10.58530/2023/0226

The Influence of b value and Resolution on MR Tractography and Connectome Construction in Adult Mouse Brain at 16.4 Tesla

2023

Journal Article

A cross-comparative analysis of in vivo versus ex vivo MRI indices in a mouse model of concussion

Vinh To, Xuan, Kurniawan, Nyoman D., Cumming, Paul and Nasrallah, Fatima A. (2023). A cross-comparative analysis of in vivo versus ex vivo MRI indices in a mouse model of concussion. Brain Research, 1820 148562, 148562. doi: 10.1016/j.brainres.2023.148562

A cross-comparative analysis of in vivo versus ex vivo MRI indices in a mouse model of concussion

2023

Journal Article

Physical properties and magnetic resonance imaging of the Australian green plum (Buchanania obovata) through maturity and ripening and across locations

Fyfe, Selina, Smyth, Heather E., Schirra, Horst Joachim, Rychlik, Michael, Sultanbawa, Yasmina and Kurniawan, Nyoman D. (2023). Physical properties and magnetic resonance imaging of the Australian green plum (Buchanania obovata) through maturity and ripening and across locations. Postharvest Biology and Technology, 205 112494, 1-15. doi: 10.1016/j.postharvbio.2023.112494

Physical properties and magnetic resonance imaging of the Australian green plum (Buchanania obovata) through maturity and ripening and across locations

2023

Journal Article

An unsupervised deep learning-based image translation method for retrospective motion correction of high resolution kidney MRI

Moinian, Shahrzad, Kurniawan, Nyoman D., Chandra, Shekhar S., Vegh, Viktor and Reutens, David C. (2023). An unsupervised deep learning-based image translation method for retrospective motion correction of high resolution kidney MRI. Intelligence-Based Medicine, 8 100108, 1-15. doi: 10.1016/j.ibmed.2023.100108

An unsupervised deep learning-based image translation method for retrospective motion correction of high resolution kidney MRI

2023

Journal Article

Multi-parametric MR for detection of pathological changes in CNS of mouse model of multiple sclerosis in vivo

Althobity, Abdullah A., Khan, Nemat, Sandrock, Cheyenne J., Woodruff, Trent M, Cowin, Gary J., Brereton, Ian M. and Kurniawan, Nyoman D. (2023). Multi-parametric MR for detection of pathological changes in CNS of mouse model of multiple sclerosis in vivo. NMR in Biomedicine, 36 (10) e4964, e4964. doi: 10.1002/nbm.4964

Multi-parametric MR for detection of pathological changes in CNS of mouse model of multiple sclerosis in vivo