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2022 Journal Article Clustering ICU patients with sepsis based on the patterns of their circulating biomarkers: A secondary analysis of the CAPTAIN prospective multicenter cohort studyMisset, Benoît, Philippart, François, Fitting, Catherine, Bedos, Jean-Pierre, Diehl, Jean-Luc, Hamzaoui, Olfa, Annane, Djillali, Journois, Didier, Parlato, Marianna, Moucadel, Virginie, Cavaillon, Jean-Marc, Coste, Joël, Jacqmin, Sébastien, Journois, Didier, Lagrange, Alix, Pinot de Ville-Chenon, Gabrielle, Aissaoui, Nadia, Diehl, Jean-Luc, Guerot, Emmanuel, Venot, Marion, Hamzaoui, Olfa, Prat, Dominique, Sztrymf, Benjamin, Annane, Djillali, Maxime, Virginie, Polito, Andrea, Bouhemad, Belaïd, Bruel, Cédric, Ethuin, Frédéric ... Souza-Fonseca-Guimaraes, Fernando (2022). Clustering ICU patients with sepsis based on the patterns of their circulating biomarkers: A secondary analysis of the CAPTAIN prospective multicenter cohort study. PLoS One, 17 (10) e0267517, 1-17. doi: 10.1371/journal.pone.0267517 |
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2022 Journal Article The cancer cell-derived extracellular vesicle glycocode in immunoevasionGoncalves, Jenifer P., Deliwala, Vatsal J., Kolarich, Daniel, Souza-Fonseca-Guimaraes, Fernando and Wolfram, Joy (2022). The cancer cell-derived extracellular vesicle glycocode in immunoevasion. Trends in Immunology, 43 (11), 864-867. doi: 10.1016/j.it.2022.09.004 |
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2022 Journal Article Transcriptomic profiling of cardiac tissues from SARS‐CoV ‐2 patients identifies DNA damageKulasinghe, Arutha, Liu, Ning, Tan, Chin Wee, Monkman, James, Sinclair, Jane E., Bhuva, Dharmesh D., Godbolt, David, Pan, Liuliu, Nam, Andy, Sadeghirad, Habib, Sato, Kei, Bassi, Gianluigi Li, O'Byrne, Ken, Hartmann, Camila, Miggiolaro, Anna Flavia Ribeiro dos Santos, Marques, Gustavo Lenci, Moura, Lidia Zytynski, Richard, Derek, Adams, Mark, Noronha, Lucia de, Baena, Cristina Pellegrino, Suen, Jacky Y., Arora, Rakesh, Belz, Gabrielle T., Short, Kirsty R., Davis, Melissa J., Souza‐Fonseca Guimaraes, Fernando and Fraser, John F. (2022). Transcriptomic profiling of cardiac tissues from SARS‐CoV ‐2 patients identifies DNA damage. Immunology, 168 (3), 403-419. doi: 10.1111/imm.13577 |
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2022 Journal Article Nanobiomaterials to modulate natural killer cell responses for effective cancer immunotherapyRaza, Aun, Rossi, Gustavo Rodrigues, Janjua, Taskeen Iqbal, Souza-Fonseca-Guimaraes, Fernando and Popat, Amirali (2022). Nanobiomaterials to modulate natural killer cell responses for effective cancer immunotherapy. Trends in Biotechnology, 41 (1), 77-92. doi: 10.1016/j.tibtech.2022.06.011 |
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2022 Journal Article TGF-β and CIS inhibition overcomes NK cell suppression to restore anti-tumor immunitySouza-Fonseca Guimaraes, Fernando, Rossi, Gustavo R., Dagley, Laura F., Foroutan, Momeneh, McCulloch, Timothy R., Yousef, Jumana, Park, Hae-Young, Gunter, Jennifer H., Beavis, Paul A., Lin, Cheng-Yu, Hediyeh-zadeh, Soroor, Camilleri, Tania, Davis, Melissa J. and Huntington, Nicholas D. (2022). TGF-β and CIS inhibition overcomes NK cell suppression to restore anti-tumor immunity. Cancer Immunology Research, 10 (9), 1047-1054. doi: 10.1158/2326-6066.cir-21-1052 |
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2022 Journal Article Editorial: Cancer Immunotherapies: From Efficacy to Resistance MechanismsChandra, Janin, Hansen, Morten, Labarriere, Nathalie, Marigo, Ilaria, Souza-Fonseca-Guimaraes, Fernando, Vujanovic, Lazar, Koguchi, Yoshinobu and Jacquelot, Nicolas (2022). Editorial: Cancer Immunotherapies: From Efficacy to Resistance Mechanisms. Frontiers in Immunology, 13 939789, 939789. doi: 10.3389/fimmu.2022.939789 |
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2022 Journal Article CIS and TGF ‐β regulatory pathways influence immunity to bacterial infectionMcCulloch, Timothy R., Rossi, Gustavo R., Schreuder, Jaring, Belz, Gabrielle T., Wells, Timothy J. and Souza‐Fonseca‐Guimaraes, Fernando (2022). CIS and TGF ‐β regulatory pathways influence immunity to bacterial infection. Immunology, 167 (1), 54-63. doi: 10.1111/imm.13516 |
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2022 Journal Article Profiling of lung SARS-CoV-2 and influenza virus infection dissects virus-specific host responses and gene signaturesKulasinghe, Arutha, Tan, Chin Wee, dos Santos Miggiolaro, Anna Flavia Ribeiro, Monkman, James, SadeghiRad, Habib, Bhuva, Dharmesh D., da Silva Motta Junior, Jarbas, Vaz de Paula, Caroline Busatta, Nagashima, Seigo, Baena, Cristina Pellegrino, Souza-Fonseca-Guimaraes, Paulo, de Noronha, Lucia, McCulloch, Timothy, Rodrigues Rossi, Gustavo, Cooper, Caroline, Tang, Benjamin, Short, Kirsty R., Davis, Melissa J., Souza-Fonseca-Guimaraes, Fernando, Belz, Gabrielle T. and O'Byrne, Ken (2022). Profiling of lung SARS-CoV-2 and influenza virus infection dissects virus-specific host responses and gene signatures. European Respiratory Journal, 59 (6) 2101881, 1-19. doi: 10.1183/13993003.01881-2021 |
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2021 Journal Article Transcriptome sequencing and multi-plex imaging of prostate cancer microenvironment reveals a dominant role for monocytic cells in progressionMangiola, Stefano, McCoy, Patrick, Modrak, Martin, Souza-Fonseca-Guimaraes, Fernando, Blashki, Daniel, Stuchbery, Ryan, Keam, Simon P., Kerger, Michael, Chow, Ken, Nasa, Chayanica, Le Page, Melanie, Lister, Natalie, Monard, Simon, Peters, Justin, Dundee, Phil, Williams, Scott G., Costello, Anthony J., Neeson, Paul J., Pal, Bhupinder, Huntington, Nicholas D., Corcoran, Niall M., Papenfuss, Anthony T. and Hovens, Christopher M. (2021). Transcriptome sequencing and multi-plex imaging of prostate cancer microenvironment reveals a dominant role for monocytic cells in progression. BMC Cancer, 21 (1) 846, 846. doi: 10.1186/s12885-021-08529-6 |
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2021 Journal Article Enhancing natural killer cell targeting of pediatric sarcomaOmer, Natacha, Nicholls, Wayne, Ruegg, Bronte, Souza-Fonseca-Guimaraes, Fernando and Rossi, Gustavo Rodrigues (2021). Enhancing natural killer cell targeting of pediatric sarcoma. Frontiers in Immunology, 12 791206, 791206. doi: 10.3389/fimmu.2021.791206 |
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2021 Journal Article The effects of COVID-19 on the placenta during pregnancyRad, Habib Sadeghi, Röhl, Joan, Stylianou, Nataly, Allenby, Mark C., Bazaz, Sajad Razavi, Warkiani, Majid E., Guimaraes, Fernando S. F., Clifton, Vicki L. and Kulasinghe, Arutha (2021). The effects of COVID-19 on the placenta during pregnancy. Frontiers in Immunology, 12 743022. doi: 10.3389/fimmu.2021.743022 |
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2021 Journal Article Discrete tissue microenvironments instruct diversity in resident memory T cell function and plasticityChristo, Susan N., Evrard, Maximilien, Park, Simone L., Gandolfo, Luke C., Burn, Thomas N., Fonseca, Raissa, Newman, Dane M., Alexandre, Yannick O., Collins, Nicholas, Zamudio, Natasha M., Souza-Fonseca-Guimaraes, Fernando, Pellicci, Daniel G., Chisanga, David, Shi, Wei, Bartholin, Laurent, Belz, Gabrielle T., Huntington, Nicholas D., Lucas, Andrew, Lucas, Michaela, Mueller, Scott N., Heath, William R., Ginhoux, Florent, Speed, Terence P., Carbone, Francis R., Kallies, Axel and Mackay, Laura K. (2021). Discrete tissue microenvironments instruct diversity in resident memory T cell function and plasticity. Nature Immunology, 22 (9), 1140-1151. doi: 10.1038/s41590-021-01004-1 |
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2021 Journal Article Natural killer cells and type 1 innate lymphoid cells in hepatocellular carcinoma: current knowledge and future perspectivesJacquelot, Nicolas, Seillet, Cyril, Souza-Fonseca-Guimaraes, Fernando, Sacher, Adrian G, Belz, Gabrielle T and Ohashi, Pamela S (2021). Natural killer cells and type 1 innate lymphoid cells in hepatocellular carcinoma: current knowledge and future perspectives. International Journal of Molecular Sciences, 22 (16) 9044, 1-32. doi: 10.3390/ijms22169044 |
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2021 Journal Article Transforming growth factor-β-regulated mTOR activity preserves cellular metabolism to maintain long-term T cell responses in chronic infectionGabriel, Sarah S., Tsui, Carlson, Chisanga, David, Weber, Flora, Llano-León, Manuela, Gubser, Patrick M., Bartholin, Laurent, Souza-Fonseca-Guimaraes, Fernando, Huntington, Nicholas D., Shi, Wei, Utzschneider, Daniel T. and Kallies, Axel (2021). Transforming growth factor-β-regulated mTOR activity preserves cellular metabolism to maintain long-term T cell responses in chronic infection. Immunity, 54 (8), 1698-1714.e5. doi: 10.1016/j.immuni.2021.06.007 |
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2021 Journal Article MAIT cells regulate NK cell-mediated tumor immunityPetley, Emma V., Koay, Hui-Fern, Henderson, Melissa A., Sek, Kevin, Todd, Kirsten L., Keam, Simon P., Lai, Junyun, House, Imran G., Li, Jasmine, Zethoven, Magnus, Chen, Amanda X. Y., Oliver, Amanda J., Michie, Jessica, Freeman, Andrew J., Giuffrida, Lauren, Chan, Jack D., Pizzolla, Angela, Mak, Jeffrey Y. W., McCulloch, Timothy R., Souza-Fonseca-Guimaraes, Fernando, Kearney, Conor J., Millen, Rosemary, Ramsay, Robert G., Huntington, Nicholas D., McCluskey, James, Oliaro, Jane, Fairlie, David P., Neeson, Paul J., Godfrey, Dale I. ... Darcy, Phillip K. (2021). MAIT cells regulate NK cell-mediated tumor immunity. Nature Communications, 12 (1) 4746, 1-15. doi: 10.1038/s41467-021-25009-4 |
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2021 Journal Article Towards efficient immunotherapy for bacterial infectionMcCulloch, Timothy R., Wells, Timothy J. and Souza-Fonseca-Guimaraes, Fernando (2021). Towards efficient immunotherapy for bacterial infection. Trends in Microbiology, 30 (2), 158-169. doi: 10.1016/j.tim.2021.05.005 |
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2021 Journal Article New horizons for natural killer cell research in cancer, infection and inflammationSouza-Fonseca-Guimaraes, Fernando (2021). New horizons for natural killer cell research in cancer, infection and inflammation. Clinical & Translational Immunology, 10 (4) e1275, e1275. doi: 10.1002/cti2.1275 |
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2021 Journal Article Type 2 innate lymphoid cells protect against colorectal cancer progression and predict improved patient survivalHuang, Qiutong, Jacquelot, Nicolas, Preaudet, Adele, Hediyeh-zadeh, Soroor, Souza-Fonseca-Guimaraes, Fernando, McKenzie, Andrew N. J., Hansbro, Philip M., Davis, Melissa J., Mielke, Lisa A., Putoczki, Tracy L. and Belz, Gabrielle T. (2021). Type 2 innate lymphoid cells protect against colorectal cancer progression and predict improved patient survival. Cancers, 13 (3) 559, 559-16. doi: 10.3390/cancers13030559 |
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2021 Journal Article Natural killer cells in inflammatory autoimmune diseasesYang, Yuyan, Day, Jessica, Souza-Fonseca Guimaraes, Fernando, Wicks, Ian P. and Louis, Cynthia (2021). Natural killer cells in inflammatory autoimmune diseases. Clinical & Translational Immunology, 10 (2) e1250, e1250. doi: 10.1002/cti2.1250 |
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2021 Journal Article Blockade of the co-inhibitory molecule PD-1 unleashes ILC2-dependent antitumor immunity in melanomaJacquelot, Nicolas, Seillet, Cyril, Wang, Minyu, Pizzolla, Angela, Liao, Yang, Hediyeh-zadeh, Soroor, Grisaru-Tal, Sharon, Louis, Cynthia, Huang, Qiutong, Schreuder, Jaring, Souza-Fonseca-Guimaraes, Fernando, de Graaf, Carolyn A., Thia, Kevin, Macdonald, Sean, Camilleri, Mary, Luong, Kylie, Zhang, Shengbo, Chopin, Michael, Molden-Hauer, Tristan, Nutt, Stephen L., Umansky, Viktor, Ciric, Bogoljub, Groom, Joanna R., Foster, Paul S., Hansbro, Philip M., McKenzie, Andrew N. J., Gray, Daniel H. D., Behren, Andreas, Cebon, Jonathan ... Belz, Gabrielle T. (2021). Blockade of the co-inhibitory molecule PD-1 unleashes ILC2-dependent antitumor immunity in melanoma. Nature Immunology, 22 (7), 851-864. doi: 10.1038/s41590-021-00943-z |
