
Overview
Availability
- Associate Professor David Whiley is:
- Available for supervision
Fields of research
Qualifications
- Bachelor of Applied Science, Queensland University of Technology
- Bachelor of Law, Queensland University of Technology
- Postgraduate Diploma, Queensland University of Technology
- Doctor of Philosophy, The University of Queensland
Works
Search Professor David Whiley’s works on UQ eSpace
2024
Journal Article
Determining Pneumocystis jirovecii colonisation from infection using PCR-based diagnostics in HIV-negative individuals
Watson, Anna Louise, Woodford, John, Britton, Sumudu, Gupta, Rita, Whiley, David and McCarthy, Kate (2024). Determining Pneumocystis jirovecii colonisation from infection using PCR-based diagnostics in HIV-negative individuals. Diagnostics, 14 (1) 114. doi: 10.3390/diagnostics14010114
2024
Journal Article
WHO global research priorities for antimicrobial resistance in human health
Bertagnolio, Silvia, Dobreva, Zlatina, Centner, Chad M, Olaru, Ioana Diana, Donà, Daniele, Burzo, Stefano, Huttner, Benedikt D, Chaillon, Antoine, Gebreselassie, Nebiat, Wi, Teodora, Hasso-Agopsowicz, Mateusz, Allegranzi, Benedetta, Sati, Hatim, Ivanovska, Verica, Kothari, Kavita U, Balkhy, Hanan H, Cassini, Alessandro, Hamers, Raph L, Weezenbeek, Kitty Van, Aanensen, David, Alanio, Alexandre, Alastruey-Izquierdo, Ana, Alemayehu, Tinsae, Al-Hasan, Majdi, Allegaert, Karel, Al-Maani, Amal Saif, Al-Salman, Jameela, Alshukairi, Abeer Nizar, Amir, Afreenish ... Zignol, Matteo (2024). WHO global research priorities for antimicrobial resistance in human health. The Lancet Microbe, 5 (11) 100902, 100902-11. doi: 10.1016/S2666-5247(24)00134-4
2024
Conference Publication
Clinical effectiveness, sustainability and quality of a large, decentralised molecular point-of-care testing network for STIs in regional and remote primary care clinics in Australia
Causer, Louise M., Anderson, David, Andrewartha, Kelly, Armstrong, Paul, Atkinson, David, Badman, Steven, Bastian, Lisa, Carroll, Catherine, Donovan, Basil, Fairley, Christopher, Gunathilake, Manoji, Guy, Rebecca, Hengel, Belinda, Kaldor, John, Leonard, Jessica, Maher, Lisa, Mak, Donna, Moore, Liz, O'Connor, Sean, Persing, David, Rees, Tom, Regan, David, Saha, Amit, Shephard, Mark, Smith, Kirsty, Speers, David, Tangey, Annie, Walshe, Veronica, Wand, Handan ... White, Caitlyn (2024). Clinical effectiveness, sustainability and quality of a large, decentralised molecular point-of-care testing network for STIs in regional and remote primary care clinics in Australia. Annual Meeting of the Infectious-Diseases-Society-for-Obstetrics-and-Gynecology (IDSOG), Boston Ma, Aug 04-06, 2022. PHILADELPHIA: LIPPINCOTT WILLIAMS & WILKINS.
2023
Journal Article
Maximizing the Neisseria gonorrhoeae confirmatory rate and the genotypic detection of ciprofloxacin resistance for samples screened with cobas CT/NG
Pryce, Todd M., Foti, Olivia R., Haygarth, Erin J. and Whiley, David M. (2023). Maximizing the Neisseria gonorrhoeae confirmatory rate and the genotypic detection of ciprofloxacin resistance for samples screened with cobas CT/NG. Journal of Clinical Microbiology, 62 (1) e0103923, 1-14. doi: 10.1128/jcm.01039-23
2023
Journal Article
Evaluation of Illumina® COVIDSeq™ as a Tool for Omicron SARS-CoV-2 Characterisation
Lowry, Kym, Bauer, Michelle J., Buckley, Cameron, Wang, Claire, Bordin, Amanda, Badman, Steven, Harris, Patrick N.A., Mackay, Ian and Whiley, David (2023). Evaluation of Illumina® COVIDSeq™ as a Tool for Omicron SARS-CoV-2 Characterisation. Journal of Virological Methods, 322 114827, 1-5. doi: 10.1016/j.jviromet.2023.114827
2023
Journal Article
Rapid inactivation and sample preparation for SARS-CoV-2 PCR-based diagnostics using TNA-Cifer reagent E
Pollak, Nina, Rawle, Daniel J., Yan, Kexin, Buckley, Cameron, Le, Thuy, Wang, Claire Y., Ertl, Nicole G., Van Huyssteen, Karla, Crkvencic, Nicole, Hashmi, Misha, Lyons, Russell E., Whiley, David M., Suhrbier, Andreas and Macdonald, Joanne (2023). Rapid inactivation and sample preparation for SARS-CoV-2 PCR-based diagnostics using TNA-Cifer reagent E. Frontiers in Microbiology, 14 1238542, 1-12. doi: 10.3389/fmicb.2023.1238542
2023
Conference Publication
Neisseria gonorrhoeae antimicrobial co-resistances: implications for the utility of rapid molecular antimicrobial resistance assays and informing antimicrobial use
Bell, S. F. E., Ware, R. S., Lewis, D. L., Lahra, M. M. and Whiley, D. W. (2023). Neisseria gonorrhoeae antimicrobial co-resistances: implications for the utility of rapid molecular antimicrobial resistance assays and informing antimicrobial use. Australasian Sexual and Reproductive Health Conference, Sydney, NSW Australia, 18-20 September 2023.
2023
Journal Article
Rapid expansion of Neisseria gonorrhoeae ST7827 clone in Australia, with variable ceftriaxone phenotype unexplained by genotype
van Hal, S. J., Whiley, D. M., Le, T., Ray, S., Kundu, R. L., Kerr, E. and Lahra, M. M. (2023). Rapid expansion of Neisseria gonorrhoeae ST7827 clone in Australia, with variable ceftriaxone phenotype unexplained by genotype. Journal of Antimicrobial Chemotherapy, 78 (9), 2203-2208. doi: 10.1093/jac/dkad221
2023
Journal Article
Application of the ViroKey® SQ FLEX assay for detection of cytomegalovirus antiviral resistance
Hume, Jocelyn, Lowry, Kym, Whiley, David M., Irwin, Adam D., Bletchly, Cheryl and Sweeney, Emma L. (2023). Application of the ViroKey® SQ FLEX assay for detection of cytomegalovirus antiviral resistance. Journal of Clinical Virology, 167 105556, 1-8. doi: 10.1016/j.jcv.2023.105556
2023
Journal Article
gyrA mutations in Mycoplasma genitalium and their contribution to moxifloxacin failure: time for the next generation of resistance-guided therapy
Murray, Gerald L, Plummer, Erica L, Bodiyabadu, Kaveesha, Vodstrcil, Lenka A, Huaman, Jose L, Danielewski, Jennifer A, Chua, Teck Phui, Machalek, Dorothy A, Garland, Suzanne, Doyle, Michelle, Sweeney, Emma L, Whiley, David M and Bradshaw, Catriona S (2023). gyrA mutations in Mycoplasma genitalium and their contribution to moxifloxacin failure: time for the next generation of resistance-guided therapy. Clinical Infectious Diseases, 76 (12), 2187-2195. doi: 10.1093/cid/ciad057
2023
Journal Article
A universal reagent for detection of emerging diseases using bioengineered multifunctional yeast nanofragments
Li, Junrong, Howard, Christopher B., Dey, Shuvashis, Lowry, Kym, Whiley, David M., Puttick, Simon, Rose, Stephen, Lobb, Richard J., Wuethrich, Alain, Edwardraja, Selvakumar and Trau, Matt (2023). A universal reagent for detection of emerging diseases using bioengineered multifunctional yeast nanofragments. Nature Nanotechnology, 18 (10), 1222-1229. doi: 10.1038/s41565-023-01415-1
2023
Journal Article
Antimicrobial susceptibility assays for Neisseria gonorrhoeae: a proof-of-principle population-based retrospective analysis
Bell, Sara F. E., Ware, Robert S., Lewis, David A., Lahra, Monica M. and Whiley, David M. (2023). Antimicrobial susceptibility assays for Neisseria gonorrhoeae: a proof-of-principle population-based retrospective analysis. The Lancet Microbe, 4 (7), e544-e551. doi: 10.1016/s2666-5247(23)00071-x
2023
Journal Article
Selection of Neisseria gonorrhoeae ceftriaxone resistance using doxycycline post-exposure prophylaxis
Whiley, David M., Tickner, Jacob A., Kundu, Ratan L., Hogan, Tiffany R., van Hal, Sebastiaan J. and Lahra, Monica M. (2023). Selection of Neisseria gonorrhoeae ceftriaxone resistance using doxycycline post-exposure prophylaxis. The Lancet Infectious Diseases, 23 (8), e268-e269. doi: 10.1016/s1473-3099(23)00359-6
2023
Journal Article
Cytomegalovirus in children undergoing haematopoietic stem cell transplantation: a diagnostic and therapeutic approach to antiviral resistance
Hume, Jocelyn, Sweeney, Emma L., Lowry, Kym, Fraser, Chris, Clark, Julia E., Whiley, David M. and Irwin, Adam D. (2023). Cytomegalovirus in children undergoing haematopoietic stem cell transplantation: a diagnostic and therapeutic approach to antiviral resistance. Frontiers in Pediatrics, 11 1180392, 1180392. doi: 10.3389/fped.2023.1180392
2023
Journal Article
Neisseria gonorrhoeae ciprofloxacin susceptibility testing and gyrA targets
Tickner, Jacob A, Trembizki, Ella and Whiley, David M (2023). Neisseria gonorrhoeae ciprofloxacin susceptibility testing and gyrA targets. The Lancet Microbe, 4 (8), e574-E574. doi: 10.1016/s2666-5247(23)00149-0
2023
Journal Article
Rapid molecular detection of CMY-2, and CTX-M group 1 and 9 variants via recombinase polymerase amplification
Ertl, Nicole G., Irwin, Adam D., Macdonald, Joanne, Bauer, Michelle J., Wang, Claire Y. T., Harris, Patrick N. A., Heney, Claire, Zowawi, Hosam M. and Whiley, David M. (2023). Rapid molecular detection of CMY-2, and CTX-M group 1 and 9 variants via recombinase polymerase amplification. JAC - Antimicrobial Resistance, 5 (2) dlad023, dlad023. doi: 10.1093/jacamr/dlad023
2023
Journal Article
Travel-associated lineages and unique endemic antimicrobial-susceptible lineages of Neisseria gonorrhoeae predominate in Western Australia
Al Suwayyid, Barakat A., Haese, Ethan C., Mowlaboccus, Shakeel, Pearson, Julie C., Whiley, David M., Armstrong, Paul K., Giele, Carolien M., Mak, Donna B., Bastian, Lisa, Wise, Michael J., Coombs, Geoffrey W. and Kahler, Charlene M. (2023). Travel-associated lineages and unique endemic antimicrobial-susceptible lineages of Neisseria gonorrhoeae predominate in Western Australia. Microbial Genomics, 9 (3) 000969. doi: 10.1099/mgen.0.000969
2023
Journal Article
The changing epidemiology of Neisseria gonorrhoeae genogroups and antimicrobial resistance in Queensland, Australia, 2010–15: a case series analysis of unique Neisseria gonorrhoeae isolates
McHugh, Lisa, Dyda, Amalie, Guglielmino, Christine, Buckley, Cameron, Lau, Colleen L., Jennison, Amy V., Regan, David G., Wood, James, Whiley, David and Trembizki, Ella (2023). The changing epidemiology of Neisseria gonorrhoeae genogroups and antimicrobial resistance in Queensland, Australia, 2010–15: a case series analysis of unique Neisseria gonorrhoeae isolates. Sexual Health, 20 (4), 296-302. doi: 10.1071/sh22118
2023
Journal Article
Mycoplasma hominis and Ureaplasma urealyticum infections in the immediate post-lung transplant period: A case series and literature review
Divithotewala, Chandima, Sweeney, Emma L., Burke, Andrew, Graves, Bianca, Stewart, Adam, Whiley, David, Heney, Claire, Hopkins, Peter M. and Chambers, Daniel C. (2023). Mycoplasma hominis and Ureaplasma urealyticum infections in the immediate post-lung transplant period: A case series and literature review. Transplant Infectious Disease, 25 (3) e14058, 1-7. doi: 10.1111/tid.14058
2023
Journal Article
Decreased Neisseria gonorrhoeae genotypic diversity following COVID-19 restrictions in Queensland, Australia 2020
Alharbi, Bushra, Jennison, Amy V., Hicks, Vicki, Whiley, David M, Sweeney, Emma and Trembizki, Ella (2023). Decreased Neisseria gonorrhoeae genotypic diversity following COVID-19 restrictions in Queensland, Australia 2020. Epidemiology and Infection, 151 e67, 1-8. doi: 10.1017/S0950268823000523
Funding
Current funding
Past funding
Supervision
Availability
- Associate Professor David Whiley is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Design and evaluation of point-of-care molecular diagnostics and metagenomics for tropical aetiological surveillence.
Principal Advisor
-
Doctor Philosophy
New treatment strategies for STIs: Development of a molecular diagnostic test for cefixime-resistant gonorrhoea
Principal Advisor
Other advisors: Dr Emma Sweeney
-
Doctor Philosophy
The epidemiology of gonorrhoea in Queensland
Principal Advisor
Other advisors: Associate Professor Steve Lambert
-
Doctor Philosophy
Rapid detection of AMR targets using isothermal technology.
Principal Advisor
Other advisors: Associate Professor Adam Irwin
-
Doctor Philosophy
Rapid detection of AMR targets using isothermal technology
Principal Advisor
Other advisors: Associate Professor Adam Irwin
-
Doctor Philosophy
Rapid detection of AMR targets using isothermal technology
Principal Advisor
Other advisors: Associate Professor Adam Irwin
-
Doctor Philosophy
Design and evaluation of point-of-care molecular diagnostics and metagenomics for tropical aetiological surveillence.
Principal Advisor
-
Doctor Philosophy
The development of an integrated molecular diagnostic pathway to optimise the treatment of cytomegalovirus in children undergoing haematopoietic stem cell transplant
Associate Advisor
Other advisors: Dr Kym Lowry, Associate Professor Adam Irwin, Dr Emma Sweeney
-
Doctor Philosophy
Accelerating pathogen detection and antibiotic resistance prediction in children with suspected sepsis.
Associate Advisor
Other advisors: Dr Patrick Harris, Associate Professor Adam Irwin
-
Doctor Philosophy
The development of an integrated molecular diagnostic pathway to optimise the treatment of cytomegalovirus in children undergoing haematopoietic stem cell transplant
Associate Advisor
Other advisors: Dr Kym Lowry, Associate Professor Adam Irwin, Dr Emma Sweeney
Completed supervision
-
2024
Doctor Philosophy
The Molecular Epidemiology of Neisseria gonorrhoeae Antimicrobial Resistance in Papua New Guinea
Principal Advisor
Other advisors: Dr Kym Lowry, Dr Emma Sweeney
-
2019
Doctor Philosophy
Factors that influence Neisseria gonorrhoeae antimicrobial resistance and transmission in Australia
Principal Advisor
Other advisors: Associate Professor Scott Beatson, Dr Brian Forde
-
2018
Doctor Philosophy
Rotavirus detection and typing in the rotavirus vaccine era
Principal Advisor
-
2016
Doctor Philosophy
A nationwide study of Neisseria gonorrhoeae antimicrobial resistance; towards molecular AMR surveillance
Principal Advisor
Other advisors: Dr Michael Nissen
-
2024
Doctor Philosophy
Exploring diagnostic approaches and quality assurance data for improved management of gonorrhoea antimicrobial resistance
Associate Advisor
Other advisors: Dr Maggy Lord, Dr Emma Sweeney, Dr Ella Trembizki
-
2018
Doctor Philosophy
Diversity of environmental and clinical Pseudomonas aeruginosa isolates
Associate Advisor
Other advisors: Professor Scott Bell
-
2016
Doctor Philosophy
Heterogeneity within Pseudomonas aeruginosa shared strains in cystic fibrosis: the development and spread of antimicrobial resistance
Associate Advisor
Other advisors: Professor Scott Bell
-
2015
Doctor Philosophy
RESPIRATORY VIRUS INFECTIONS DURING THE FIRST YEAR OF LIFE A LONGITUDINAL COMMUNITY-BASED DYNAMIC BIRTH COHORT STUDY
Associate Advisor
-
2015
Doctor Philosophy
Characterising the Pathogenesis and Biology of Newly Described Human Polyomaviruses
Associate Advisor
Other advisors: Dr Michael Nissen, Dr Seweryn Bialasiewicz
-
2013
Doctor Philosophy
Detection, Identification and Genotyping of Pseudomonas aeruginosa strains isolated from environmental and clinical samples.
Associate Advisor
Other advisors: Dr Michael Nissen
-
2013
Doctor Philosophy
Molecular Characterisation and Detection of Gonococcal Antimicrobial Resistance.
Associate Advisor
Other advisors: Dr Michael Nissen
Media
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