
Overview
Availability
- Associate Professor David Whiley is:
- Available for supervision
Fields of research
Qualifications
- Bachelor of Applied Science, Queensland University of Technology
- Bachelor of Law, Queensland University of Technology
- Postgraduate Diploma, Queensland University of Technology
- Doctor of Philosophy, The University of Queensland
Works
Search Professor David Whiley’s works on UQ eSpace
2021
Journal Article
Rapid detection of NDM and VIM carbapenemase encoding genes by recombinase polymerase amplification and lateral flow–based detection
Ayfan, Abdulrahman K. S., Macdonald, Joanne, Harris, Patrick N. A., Heney, Claire, Paterson, David L., Trembizki, Ella, Wang, Claire Y. T., Whiley, David M., Zowawi, Hosam M. and Irwin, Adam D. (2021). Rapid detection of NDM and VIM carbapenemase encoding genes by recombinase polymerase amplification and lateral flow–based detection. European Journal of Clinical Microbiology & Infectious Diseases, 40 (11), 2447-2453. doi: 10.1007/s10096-021-04267-6
2021
Other Outputs
Modelling outbreak response strategies for preventing spread of emergent Neisseria gonorrhoeae strains in men who have sex with men in Australia
Duan, Qibin, Carmody, Chris, Donovan, Basil, Guy, Rebecca J, Hui, Ben B, Kaldor, John M, Lahra, Monica M, Law, Matthew G, Lewis, David A, Maley, Michael, McGregor, Skye, McNulty, Anna, Selvey, Christine, Templeton, David J, Whiley, David M, Regan, David G and Wood, James G (2021). Modelling outbreak response strategies for preventing spread of emergent Neisseria gonorrhoeae strains in men who have sex with men in Australia. doi: 10.1101/2021.04.30.21256375
2021
Journal Article
Reflex detection of ciprofloxacin resistance in Neisseria gonorrhoeae by use of the SpeeDx ResistancePlus GC assay
Lee, Darren Y.J., Ashcroft, Melinda M., Chow, Eric P.F., Sait, Michelle, De Petra, Vesna, Tschaepe, Marlene, Lange, Sigrid, Taiaroa, George, Bradshaw, Catriona S., Whiley, David M., Fairley, Christopher K., Howden, Benjamin P., Chen, Marcus Y., Pasricha, Shivani and Williamson, Deborah A. (2021). Reflex detection of ciprofloxacin resistance in Neisseria gonorrhoeae by use of the SpeeDx ResistancePlus GC assay. Journal of Clinical Microbiology, 59 (5) e00089-21. doi: 10.1128/JCM.00089-21
2021
Journal Article
Antiseptic mouthwash for gonorrhoea prevention (OMEGA): a randomised, double-blind, parallel-group, multicentre trial
Chow, Eric P. F., Williamson, Deborah A., Hocking, Jane S., Law, Matthew G., Maddaford, Kate, Bradshaw, Catriona S., McNulty, Anna, Templeton, David J., Moore, Richard, Murray, Gerald L., Danielewski, Jennifer A., Wigan, Rebecca, Chen, Marcus Y., Guy, Rebecca J., Zhang, Lei, Donovan, Basil, Grulich, Andrew E., Kaldor, John M., Whiley, David M., Cornelisse, Vincent J., Howden, Benjamin P., Lewis, David A., Read, Tim R. H. and Fairley, Christopher K. (2021). Antiseptic mouthwash for gonorrhoea prevention (OMEGA): a randomised, double-blind, parallel-group, multicentre trial. The Lancet Infectious Diseases, 21 (5), 647-656. doi: 10.1016/S1473-3099(20)30704-0
2021
Journal Article
Rapid macrolide and amikacin resistance testing for Mycobacterium abscessus in people with cystic fibrosis
Bordin, Amanda, Pandey, Sushil, Coulter, Christopher, Syrmis, Melanie, Pardo, Carolyn, Hackett, Hazel, Bell, Scott C., Wainwright, Claire E., Nimmo, Graeme R., Jennison, Amy V., Clark, Julia E. and Whiley, David M. (2021). Rapid macrolide and amikacin resistance testing for Mycobacterium abscessus in people with cystic fibrosis. Journal of Medical Microbiology, 70 (4) 001349, 1-11. doi: 10.1099/jmm.0.001349
2021
Other Outputs
Contemporary syphilis is characterised by rapid global spread of pandemic Treponema pallidum lineages
Beale, Mathew A., Marks, Michael, Cole, Michelle J., Lee, Min-Kuang, Pitt, Rachel, Ruis, Christopher, Balla, Eszter, Crucitti, Tania, Ewens, Michael, Fernández-Naval, Candela, Grankvist, Anna, Guiver, Malcolm, Kenyon, Chris R., Khairulin, Rafil, Kularatne, Ranmini, Arando, Maider, Molini, Barbara J., Obukhov, Andrey, Page, Emma E., Petrovay, Fruzsina, Rietmeijer, Cornelis, Rowley, Dominic, Shokoples, Sandy, Smit, Erasmus, Sweeney, Emma L., Taiaroa, George, Vera, Jaime H., Wennerås, Christine, Whiley, David M. ... Thomson, Nicholas R. (2021). Contemporary syphilis is characterised by rapid global spread of pandemic Treponema pallidum lineages. doi: 10.1101/2021.03.25.21250180
2021
Other Outputs
MicroPIPE: An end-to-end solution for high-quality complete bacterial genome construction
Murigneux, Valentine, Roberts, Leah W., Forde, Brian M., Phan, Minh-Duy, Nhu, Nguyen Thi Khanh, Irwin, Adam D., Harris, Patrick N. A., Paterson, David L., Schembri, Mark A., Whiley, David M. and Beatson, Scott A. (2021). MicroPIPE: An end-to-end solution for high-quality complete bacterial genome construction. doi: 10.1101/2021.02.02.429319
2021
Journal Article
A comparison of ThinPrep against four non-volatile transport media for HPV testing at or near the point of care
Badman, S. G., Vallely, A. J., Pardo, C., Mhango, L. P., Cornall, A. M., Kaldor, J. K. and Whiley, D. (2021). A comparison of ThinPrep against four non-volatile transport media for HPV testing at or near the point of care. Pathology, 53 (2), 264-266. doi: 10.1016/j.pathol.2020.10.006
2021
Journal Article
Exploring the implications for coincidental treatment of Mycoplasma genitalium infection in Neisseria gonorrhoeae-positive patients
Mhango, Lebogang P., Trembizki, Ella, Thng, Caroline, Whiley, David M. and Sweeney, Emma L. (2021). Exploring the implications for coincidental treatment of Mycoplasma genitalium infection in Neisseria gonorrhoeae-positive patients. JAC - Antimicrobial Resistance, 3 (1) dlab033, dlab033. doi: 10.1093/jacamr/dlab033
2021
Journal Article
Mycoplasma genitalium infections can comprise a mixture of both fluoroquinolone-susceptible and fluoroquinolone-resistant strains
Sweeney, Emma L., Lowry, Kym, Bletchly, Cheryl, Nimmo, Graeme R. and Whiley, David M. (2021). Mycoplasma genitalium infections can comprise a mixture of both fluoroquinolone-susceptible and fluoroquinolone-resistant strains. Journal of Antimicrobial Chemotherapy, 76 (4), 887-892. doi: 10.1093/jac/dkaa542
2021
Journal Article
High coverage of diverse invasive meningococcal serogroup B strains by the 4-component vaccine 4CMenB in Australia, 2007–2011: concordant predictions between MATS and genetic MATS
Tozer, Sarah J., Smith, Helen V., Whiley, David M., Borrow, Ray, Boccadifuoco, Giuseppe, Medini, Duccio, Serruto, Davide, Giuliani, Marzia Monica, Stella, Maria, De Paola, Rosita, Muzzi, Alessandro, Pizza, Mariagrazia, Sloots, Theo P. and Nissen, Michael D. (2021). High coverage of diverse invasive meningococcal serogroup B strains by the 4-component vaccine 4CMenB in Australia, 2007–2011: concordant predictions between MATS and genetic MATS. Human Vaccines and Immunotherapeutics, 17 (9), 3230-3238. doi: 10.1080/21645515.2021.1904758
2021
Journal Article
Emergence and impact of oprD mutations in Pseudomonas aeruginosa strains in cystic fibrosis
Sherrard, Laura J., Wee, Bryan A., Duplancic, Christine, Ramsay, Kay A., Dave, Keyur A., Ballard, Emma, Wainwright, Claire E., Grimwood, Keith, Sidjabat, Hanna E., Whiley, David M., Beatson, Scott A., Kidd, Timothy J. and Bell, Scott C. (2021). Emergence and impact of oprD mutations in Pseudomonas aeruginosa strains in cystic fibrosis. Journal of Cystic Fibrosis, 21 (1), e35-e43. doi: 10.1016/j.jcf.2021.03.007
2021
Journal Article
Evaluation of the SpeeDx ResistancePlusVR GC and SpeeDx GC 23S 2611 (beta) molecular assays for prediction of antimicrobial resistance/susceptibility to ciprofloxacin and azithromycin in Neisseria gonorrhoeae
Hadad, Ronza, Cole, Michelle Jayne, Ebeyan, Samantha, Jacobsson, Susanne, Tan, Lit Yeen, Golparian, Daniel, Erskine, Simon, Day, Michaela, Whiley, David, Unemo, Magnus and the European collaborative group (2021). Evaluation of the SpeeDx ResistancePlusVR GC and SpeeDx GC 23S 2611 (beta) molecular assays for prediction of antimicrobial resistance/susceptibility to ciprofloxacin and azithromycin in Neisseria gonorrhoeae. Journal of Antimicrobial Chemotherapy, 76 (1), 84-90. doi: 10.1093/JAC/DKAA381
2020
Journal Article
Improved sensitivity from pooled urine, pharyngeal and rectal specimens when using a molecular assay for the detection of chlamydia and gonorrhoea near point of care
Dean, Judith Ann, Bell, Sara Fiona Elizabeth, Coffey, Luke, Debattista, Joseph, Badman, Steven, Redmond, Andrew M, Whiley, David M., Lemoire, Jime, Williams, Owain David, Howard, Chris and Gilks, Charles F. (2020). Improved sensitivity from pooled urine, pharyngeal and rectal specimens when using a molecular assay for the detection of chlamydia and gonorrhoea near point of care. Sexually Transmitted Infections, 97 (6), sextrans-2020. doi: 10.1136/sextrans-2020-054835
2020
Journal Article
Evaluation of commercially available viral transport medium (VTM) for SARS-CoV-2 inactivation and use in point-of-care (POC) testing
Van Bockel, David, Munier, C. Mee Ling, Turville, Stuart, Badman, Steven G., Walker, Gregory, Stella, Alberto Ospina, Aggarwal, Anupriya, Yeang, Malinna, Condylios, Anna, Kelleher, Anthony D., Applegate, Tanya L., Vallely, Andrew, Whiley, David, Rawlinson, William, Cunningham, Phillip, Kaldor, John and Guy, Rebecca (2020). Evaluation of commercially available viral transport medium (VTM) for SARS-CoV-2 inactivation and use in point-of-care (POC) testing. Viruses, 12 (11) 1208, 1-11. doi: 10.3390/v12111208
2020
Journal Article
Enhanced molecular surveillance in response to the detection of extensively resistant gonorrhoea in Australia
Trembizki, Ella, Jennison, Amy V, Buckley, Cameron, Bright, Amy, Holds, Judith, Ward, Alison, Pitt, John, Pendle, Stella, Baird, Rob, Freeman, Kevin, Robson, Jenny, Mhango, Lebogang, Lowry, Kym, Lahra, Monica and Whiley, David (2020). Enhanced molecular surveillance in response to the detection of extensively resistant gonorrhoea in Australia. Journal of Antimicrobial Chemotherapy, 76 (1), 270-271. doi: 10.1093/jac/dkaa402
2020
Journal Article
Developing target product profiles for Neisseria gonorrhoeae diagnostics in the context of antimicrobial resistance: An expert consensus
Ferreyra, Cecilia, Osborn, Jennifer, Moussy, Francis, Alirol, Emilie, Lahra, Monica, Whiley, David, Shafer, William, Unemo, Magnus, Klausner, Jeffrey, Cirino, Cassandra Kelly and Wi, Teodora (2020). Developing target product profiles for Neisseria gonorrhoeae diagnostics in the context of antimicrobial resistance: An expert consensus. PLoS One, 15 (9) e0237424, 1-15. doi: 10.1371/journal.pone.0237424
2020
Journal Article
Young Aboriginal people's sexual health risk reduction strategies: a qualitative study in remote Australia
Bell, Stephen, Ward, James, Aggleton, Peter, Murray, Walbira, Silver, Bronwyn, Lockyer, Andrew, Ferguson, Tellisa, Fairley, Christopher K., Whiley, David, Ryder, Nathan, Donovan, Basil, Guy, Rebecca, Kaldor, John and Maher, Lisa (2020). Young Aboriginal people's sexual health risk reduction strategies: a qualitative study in remote Australia. Sexual Health, 17 (4), 303-310. doi: 10.1071/SH19204
2020
Journal Article
Contamination of SARS-CoV-2 RT-PCR probes at the oligonucleotide manufacturer
Wang, Claire Y.T., Buckley, Cameron, Bletchly, Cheryl, Harris, Patrick and Whiley, David (2020). Contamination of SARS-CoV-2 RT-PCR probes at the oligonucleotide manufacturer. Pathology, 52 (7), 814-816. doi: 10.1016/j.pathol.2020.08.002
2020
Journal Article
Are sex norms the norm in gonococcal surveillance?
George, C R Robert, Kundu, Ratan L, Whiley, David M and Lahra, Monica M (2020). Are sex norms the norm in gonococcal surveillance?. The Lancet Microbe, 1 (4), e143-e144. doi: 10.1016/S2666-5247(20)30087-2
Funding
Current funding
Past funding
Supervision
Availability
- Associate Professor David Whiley is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Design and evaluation of point-of-care molecular diagnostics and metagenomics for tropical aetiological surveillence.
Principal Advisor
-
Doctor Philosophy
New treatment strategies for STIs: Development of a molecular diagnostic test for cefixime-resistant gonorrhoea
Principal Advisor
Other advisors: Dr Emma Sweeney
-
Doctor Philosophy
Design and evaluation of point-of-care molecular diagnostics and metagenomics for tropical aetiological surveillence.
Principal Advisor
-
Doctor Philosophy
The epidemiology of gonorrhoea in Queensland
Principal Advisor
Other advisors: Associate Professor Steve Lambert
-
Doctor Philosophy
Rapid detection of AMR targets using isothermal technology.
Principal Advisor
Other advisors: Associate Professor Adam Irwin, Dr Leah Roberts
-
Doctor Philosophy
Rapid detection of AMR targets using isothermal technology
Principal Advisor
Other advisors: Associate Professor Adam Irwin
-
Doctor Philosophy
Rapid detection of AMR targets using isothermal technology
Principal Advisor
Other advisors: Associate Professor Adam Irwin
-
Doctor Philosophy
Design and evaluation of point-of-care molecular diagnostics and metagenomics for tropical aetiological surveillence.
Principal Advisor
-
Doctor Philosophy
The development of an integrated molecular diagnostic pathway to optimise the treatment of cytomegalovirus in children undergoing haematopoietic stem cell transplant
Associate Advisor
Other advisors: Dr Kym Lowry, Associate Professor Adam Irwin, Dr Emma Sweeney
-
Doctor Philosophy
Accelerating pathogen detection and antibiotic resistance prediction in children with suspected sepsis.
Associate Advisor
Other advisors: Dr Patrick Harris, Associate Professor Adam Irwin
-
Doctor Philosophy
The development of an integrated molecular diagnostic pathway to optimise the treatment of cytomegalovirus in children undergoing haematopoietic stem cell transplant
Associate Advisor
Other advisors: Dr Kym Lowry, Associate Professor Adam Irwin, Dr Emma Sweeney
Completed supervision
-
2024
Doctor Philosophy
The Molecular Epidemiology of Neisseria gonorrhoeae Antimicrobial Resistance in Papua New Guinea
Principal Advisor
Other advisors: Dr Kym Lowry, Dr Emma Sweeney
-
2019
Doctor Philosophy
Factors that influence Neisseria gonorrhoeae antimicrobial resistance and transmission in Australia
Principal Advisor
Other advisors: Associate Professor Scott Beatson, Dr Brian Forde
-
2018
Doctor Philosophy
Rotavirus detection and typing in the rotavirus vaccine era
Principal Advisor
-
2016
Doctor Philosophy
A nationwide study of Neisseria gonorrhoeae antimicrobial resistance; towards molecular AMR surveillance
Principal Advisor
Other advisors: Dr Michael Nissen
-
2024
Doctor Philosophy
Exploring diagnostic approaches and quality assurance data for improved management of gonorrhoea antimicrobial resistance
Associate Advisor
Other advisors: Dr Maggy Lord, Dr Emma Sweeney, Dr Ella Trembizki
-
2018
Doctor Philosophy
Diversity of environmental and clinical Pseudomonas aeruginosa isolates
Associate Advisor
Other advisors: Professor Scott Bell
-
2016
Doctor Philosophy
Heterogeneity within Pseudomonas aeruginosa shared strains in cystic fibrosis: the development and spread of antimicrobial resistance
Associate Advisor
Other advisors: Professor Scott Bell
-
2015
Doctor Philosophy
RESPIRATORY VIRUS INFECTIONS DURING THE FIRST YEAR OF LIFE A LONGITUDINAL COMMUNITY-BASED DYNAMIC BIRTH COHORT STUDY
Associate Advisor
-
2015
Doctor Philosophy
Characterising the Pathogenesis and Biology of Newly Described Human Polyomaviruses
Associate Advisor
Other advisors: Dr Michael Nissen, Dr Seweryn Bialasiewicz
-
2013
Doctor Philosophy
Detection, Identification and Genotyping of Pseudomonas aeruginosa strains isolated from environmental and clinical samples.
Associate Advisor
Other advisors: Dr Michael Nissen
-
2013
Doctor Philosophy
Molecular Characterisation and Detection of Gonococcal Antimicrobial Resistance.
Associate Advisor
Other advisors: Dr Michael Nissen
Media
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