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2022

Journal Article

Author correction: a chickpea genetic variation map based on the sequencing of 3,366 genomes

Varshney, Rajeev K., Roorkiwal, Manish, Sun, Shuai, Bajaj, Prasad, Chitikineni, Annapurna, Thudi, Mahendar, Singh, Narendra P., Du, Xiao, Upadhyaya, Hari D., Khan, Aamir W., Wang, Yue, Garg, Vanika, Fan, Guangyi, Cowling, Wallace A., Crossa, José, Gentzbittel, Laurent, Voss-Fels, Kai Peter, Valluri, Vinod Kumar, Sinha, Pallavi, Singh, Vikas K., Ben, Cécile, Rathore, Abhishek, Punna, Ramu, Singh, Muneendra K., Tar’an, Bunyamin, Bharadwaj, Chellapilla, Yasin, Mohammad, Pithia, Motisagar S., Singh, Servejeet ... Liu, Xin (2022). Author correction: a chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 604 (7905), E12-E12. doi: 10.1038/s41586-022-04660-x

Author correction: a chickpea genetic variation map based on the sequencing of 3,366 genomes

2022

Journal Article

Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust

Jambuthenne, Dilani T., Riaz, Adnan, Athiyannan, Naveenkumar, Alahmad, Samir, Ng, Wei Ling, Ziems, Laura, Afanasenko, Olga, Periyannan, Sambasivam K., Aitken, Elizabeth, Platz, Greg, Godwin, Ian, Voss-Fels, Kai P., Dinglasan, Eric and Hickey, Lee T. (2022). Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust. Theoretical and Applied Genetics, 135 (4), 1355-1373. doi: 10.1007/s00122-022-04037-8

Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust

2022

Journal Article

A toolkit to rapidly modify root systems through single plant selection

Rambla, Charlotte, Van Der Meer, Sarah, Voss-Fels, Kai P., Makhoul, Manar, Obermeier, Christian, Snowdon, Rod, Ober, Eric S., Watt, Michelle, Alahmad, Samir and Hickey, Lee T. (2022). A toolkit to rapidly modify root systems through single plant selection. Plant Methods, 18 (1) 2, 2. doi: 10.1186/s13007-021-00834-2

A toolkit to rapidly modify root systems through single plant selection

2021

Journal Article

A chickpea genetic variation map based on the sequencing of 3,366 genomes

Varshney, Rajeev K., Roorkiwal, Manish, Sun, Shuai, Bajaj, Prasad, Chitikineni, Annapurna, Thudi, Mahendar, Singh, Narendra P., Du, Xiao, Upadhyaya, Hari D., Khan, Aamir W., Wang, Yue, Garg, Vanika, Fan, Guangyi, Cowling, Wallace A., Crossa, José, Gentzbittel, Laurent, Voss-Fels, Kai Peter, Valluri, Vinod Kumar, Sinha, Pallavi, Singh, Vikas K., Ben, Cécile, Rathore, Abhishek, Punna, Ramu, Singh, Muneendra K., Tar’an, Bunyamin, Bharadwaj, Chellapilla, Yasin, Mohammad, Pithia, Motisagar S., Singh, Servejeet ... Liu, Xin (2021). A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599 (7886), 622-627. doi: 10.1038/s41586-021-04066-1

A chickpea genetic variation map based on the sequencing of 3,366 genomes

2021

Journal Article

A linkage disequilibrium-based approach to position unmapped SNPs in crop species

Yadav, Seema, Ross, Elizabeth M., Aitken, Karen S., Hickey, Lee T., Powell, Owen, Wei, Xianming, Voss-Fels, Kai P. and Hayes, Ben J. (2021). A linkage disequilibrium-based approach to position unmapped SNPs in crop species. BMC Genomics, 22 (1) 773, 1-9. doi: 10.1186/s12864-021-08116-w

A linkage disequilibrium-based approach to position unmapped SNPs in crop species

2021

Journal Article

Perspectives on applications of hierarchical gene-to-phenotype (G2P) maps to capture non-stationary effects of alleles in genomic prediction

Powell, Owen M., Voss-Fels, Kai P., Jordan, David R., Hammer, Graeme and Cooper, Mark (2021). Perspectives on applications of hierarchical gene-to-phenotype (G2P) maps to capture non-stationary effects of alleles in genomic prediction. Frontiers in Plant Science, 12 663565, 663565. doi: 10.3389/fpls.2021.663565/full

Perspectives on applications of hierarchical gene-to-phenotype (G2P) maps to capture non-stationary effects of alleles in genomic prediction

2021

Journal Article

Genetic characterization of adult-plant resistance to tan spot (syn, yellow spot) in wheat

Dinglasan, Eric G., Peressini, Tamaya, Marathamuthu, Kalai A., See, Pao Theen, Snyman, Lisle, Platz, Greg, Godwin, Ian, Voss-Fels, Kai P., Moffat, Caroline S. and Hickey, Lee T. (2021). Genetic characterization of adult-plant resistance to tan spot (syn, yellow spot) in wheat. Theoretical and Applied Genetics, 134 (9), 2823-2839. doi: 10.1007/s00122-021-03861-8

Genetic characterization of adult-plant resistance to tan spot (syn, yellow spot) in wheat

2021

Journal Article

Regional association analysis coupled with transcriptome analyses reveal candidate genes affecting seed oil accumulation in Brassica napus

Yao, Min, Guan, Mei, Yang, Qian, Huang, Luyao, Xiong, Xinghua, Jan, Habib U., Voss-Fels, Kai P., Werner, Christian R., He, Xin, Qian, Wei, Snowdon, Rod J., Guan, Chunyun, Hua, Wei and Qian, Lunwen (2021). Regional association analysis coupled with transcriptome analyses reveal candidate genes affecting seed oil accumulation in Brassica napus. Theoretical and Applied Genetics, 134 (5), 1545-1555. doi: 10.1007/s00122-021-03788-0

Regional association analysis coupled with transcriptome analyses reveal candidate genes affecting seed oil accumulation in Brassica napus

2021

Journal Article

Improved genomic prediction of clonal performance in sugarcane by exploiting non-additive genetic effects

Yadav, Seema, Wei, Xianming, Joyce, Priya, Atkin, Felicity, Deomano, Emily, Sun, Yue, Nguyen, Loan T., Ross, Elizabeth M., Cavallaro, Tony, Aitken, Karen S., Hayes, Ben J. and Voss-Fels, Kai P. (2021). Improved genomic prediction of clonal performance in sugarcane by exploiting non-additive genetic effects. Theoretical and Applied Genetics, 134 (7), 2235-2252. doi: 10.1007/s00122-021-03822-1

Improved genomic prediction of clonal performance in sugarcane by exploiting non-additive genetic effects

2021

Journal Article

Wheat root systems as a breeding target for climate resilience

Ober, Eric S., Alahmad, Samir, Cockram, James, Forestan, Cristian, Hickey, Lee T., Kant, Josefine, Maccaferri, Marco, Marr, Emily, Milner, Matthew, Pinto, Francisco, Rambla, Charlotte, Reynolds, Matthew, Salvi, Silvio, Sciara, Giuseppe, Snowdon, Rod J., Thomelin, Pauline, Tuberosa, Roberto, Uauy, Cristobal, Voss-Fels, Kai P., Wallington, Emma and Watt, Michelle (2021). Wheat root systems as a breeding target for climate resilience. Theoretical and Applied Genetics, 134 (6), 1645-1662. doi: 10.1007/s00122-021-03819-w

Wheat root systems as a breeding target for climate resilience

2021

Journal Article

Need for speed: manipulating plant growth to accelerate breeding cycles

Bhatta, Madhav, Sandro, Pablo, Smith, Millicent R., Delaney, Oscar, Voss-Fels, Kai P., Gutierrez, Lucia and Hickey, Lee T. (2021). Need for speed: manipulating plant growth to accelerate breeding cycles. Current Opinion in Plant Biology, 60 101986, 101986. doi: 10.1016/j.pbi.2020.101986

Need for speed: manipulating plant growth to accelerate breeding cycles

2021

Journal Article

Tackling G × E × M interactions to close on-farm yield-gaps: creating novel pathways for crop improvement by predicting contributions of genetics and management to crop productivity

Cooper, Mark, Voss-Fels, Kai P., Messina, Carlos D., Tang, Tom and Hammer, Graeme L. (2021). Tackling G × E × M interactions to close on-farm yield-gaps: creating novel pathways for crop improvement by predicting contributions of genetics and management to crop productivity. Theoretical and Applied Genetics, 134 (6), 1625-1644. doi: 10.1007/s00122-021-03812-3

Tackling G × E × M interactions to close on-farm yield-gaps: creating novel pathways for crop improvement by predicting contributions of genetics and management to crop productivity

2021

Journal Article

Accuracy of genomic prediction of complex traits in sugarcane

Hayes, Ben J., Wei, Xianming, Joyce, Priya, Atkin, Felicity, Deomano, Emily, Yue, Jenny, Nguyen, Loan, Ross, Elizabeth M., Cavallaro, Tony, Aitken, Karen S. and Voss-Fels, Kai P. (2021). Accuracy of genomic prediction of complex traits in sugarcane. Theoretical and Applied Genetics, 134 (5), 1455-1462. doi: 10.1007/s00122-021-03782-6

Accuracy of genomic prediction of complex traits in sugarcane

2021

Journal Article

Strategies and considerations for implementing genomic selection to improve traits with additive and non-additive genetic architectures in sugarcane breeding

Voss-Fels, Kai P., Wei, Xianming, Ross, Elizabeth M., Frisch, Matthias, Aitken, Karen S., Cooper, Mark and Hayes, Ben J. (2021). Strategies and considerations for implementing genomic selection to improve traits with additive and non-additive genetic architectures in sugarcane breeding. Theoretical and Applied Genetics, 134 (5), 1493-1511. doi: 10.1007/s00122-021-03785-3

Strategies and considerations for implementing genomic selection to improve traits with additive and non-additive genetic architectures in sugarcane breeding

2021

Journal Article

Modelling selection response in plant breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions

Cooper, M., Powell, O., Voss-Fels, K. P., Messina, C. D., Gho, C., Podlich, D. W., Technow, F., Chapman, S. C., Beveridge, C. A., Ortiz-Barrientos, D. and Hammer, G. L. (2021). Modelling selection response in plant breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions. in silico Plants, 3 (1) diaa016, 1-21. doi: 10.1093/insilicoplants/diaa016

Modelling selection response in plant breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions

2020

Journal Article

Adaptive traits to improve Durum wheat yield in drought and crown rot environments

Alahmad, Samir, Kang, Yichen, Dinglasan, Eric, Mazzucotelli, Elisabetta, Voss-Fels, Kai P., Able, Jason A., Christopher, Jack, Bassi, Filippo M. and Hickey, Lee T. (2020). Adaptive traits to improve Durum wheat yield in drought and crown rot environments. International Journal of Molecular Sciences, 21 (15) 5260, 1-17. doi: 10.3390/ijms21155260

Adaptive traits to improve Durum wheat yield in drought and crown rot environments

2020

Journal Article

GWAS and co-expression network combination uncovers multigenes with close linkage effects on the oleic acid content accumulation in Brassica napus

Yao, Min, Guan, Mei, Zhang, Zhenqian, Zhang, Qiuping, Cui, Yixin, Chen, Hao, Liu, Wei, Jan, Habib U., Voss-Fels, Kai P., Werner, Christian R., He, Xin, Liu, Zhongsong, Guan, Chunyun, Snowdon, Rod J., Hua, Wei and Qian, Lunwen (2020). GWAS and co-expression network combination uncovers multigenes with close linkage effects on the oleic acid content accumulation in Brassica napus. BMC Genomics, 21 (1) 320, 320. doi: 10.1186/s12864-020-6711-0

GWAS and co-expression network combination uncovers multigenes with close linkage effects on the oleic acid content accumulation in Brassica napus

2020

Journal Article

Accelerating genetic gain in sugarcane breeding using genomic selection

Yadav, Seema, Jackson, Phillip, Wei, Xianming, Ross, Elizabeth M., Aitken, Karen, Deomano, Emily, Atkin, Felicity, Hayes, Ben J. and Voss-Fels, Kai P. (2020). Accelerating genetic gain in sugarcane breeding using genomic selection. Agronomy, 10 (4) 585, 1-21. doi: 10.3390/agronomy10040585

Accelerating genetic gain in sugarcane breeding using genomic selection

2020

Journal Article

Overcoming polyploidy pitfalls: a user guide for effective SNP conversion into KASP markers in wheat

Makhoul, M., Rambla, C., Voss-Fels, K. P., Hickey, L. T., Snowdon, R. J. and Obermeier, C. (2020). Overcoming polyploidy pitfalls: a user guide for effective SNP conversion into KASP markers in wheat. Theoretical and Applied Genetics, 133 (8), 2413-2430. doi: 10.1007/s00122-020-03608-x

Overcoming polyploidy pitfalls: a user guide for effective SNP conversion into KASP markers in wheat

2019

Journal Article

Revolutionizing agriculture with synthetic biology

Wurtzel, Eleanore T., Vickers, Claudia E., Hanson, Andrew D., Millar, A. Harvey, Cooper, Mark, Voss-Fels, Kai P., Nikel, Pablo I. and Erb, Tobias J. (2019). Revolutionizing agriculture with synthetic biology. Nature Plants, 5 (12), 1207-1210. doi: 10.1038/s41477-019-0539-0

Revolutionizing agriculture with synthetic biology