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2016

Journal Article

Cognitive neuroepigenetics: the next evolution in our understanding of the molecular mechanisms underlying learning and memory?

Marshall, Paul and Bredy, Timothy W. (2016). Cognitive neuroepigenetics: the next evolution in our understanding of the molecular mechanisms underlying learning and memory?. n p j Science of Learning, 1 (1) 16014, 16014. doi: 10.1038/npjscilearn.2016.14

Cognitive neuroepigenetics: the next evolution in our understanding of the molecular mechanisms underlying learning and memory?

2016

Journal Article

Experience-dependent accumulation of N6-methyladenosine in the prefrontal cortex is associated with memory processes in mice

Widagdo, Jocelyn, Zhao, Qiong-Yi, Kempen, Marie-Jeanne, Tan, Men Chee, Ratnu, Vikram S., Wei, Wei, Leighton, Laura, Spadaro, Paola A., Edson, Janette, Anggono, Victor and Bredy, Timothy W. (2016). Experience-dependent accumulation of N6-methyladenosine in the prefrontal cortex is associated with memory processes in mice. Journal of Neuroscience, 36 (25), 6771-6777. doi: 10.1523/JNEUROSCI.4053-15.2016

Experience-dependent accumulation of N6-methyladenosine in the prefrontal cortex is associated with memory processes in mice

2016

Journal Article

Sex differences in learned fear expression and extinction involve altered gamma oscillations in medial prefrontal cortex

Fenton, Georgina E., Halliday, David M., Mason, Rob, Bredy, Timothy W. and Stevenson, Carl W. (2016). Sex differences in learned fear expression and extinction involve altered gamma oscillations in medial prefrontal cortex. Neurobiology of Learning and Memory, 135, 66-72. doi: 10.1016/j.nlm.2016.06.019

Sex differences in learned fear expression and extinction involve altered gamma oscillations in medial prefrontal cortex

2016

Journal Article

The role of active DNA demethylation and Tet enzyme function in memory formation and cocaine action

Alaghband, Yasaman, Bredy, Timothy W. and Wood, Marcelo A. (2016). The role of active DNA demethylation and Tet enzyme function in memory formation and cocaine action. Neuroscience Letters, 625, 40-46. doi: 10.1016/j.neulet.2016.01.023

The role of active DNA demethylation and Tet enzyme function in memory formation and cocaine action

2016

Journal Article

Elevated paternal glucocorticoid exposure alters the small noncoding RNA profile in sperm and modifies anxiety and depressive phenotypes in the offspring

Short, A. K., Fennell, K. A., Perreau, V. M., Fox, A., O'Bryan, M. K., Kim, J. H., Bredy, T. W., Pang, T. Y. and Hannan, A. J. (2016). Elevated paternal glucocorticoid exposure alters the small noncoding RNA profile in sperm and modifies anxiety and depressive phenotypes in the offspring. Translational Psychiatry, 6 (6) e837, e837-e837. doi: 10.1038/tp.2016.109

Elevated paternal glucocorticoid exposure alters the small noncoding RNA profile in sperm and modifies anxiety and depressive phenotypes in the offspring

2015

Journal Article

Synergistic Actions of Ogg1 and Mutyh DNA Glycosylases Modulate Anxiety-like Behavior in Mice

Bjorge, Monica D., Hildrestrand, Gunn A., Scheffler, Katja, Suganthan, Rajikala, Rolseth, Veslemoy, Kusnierczyk, Anna, Rowe, Alexander D., Vagbo, Cathrine B., Vetlesen, Susanne, Eide, Lars, Slupphaug, Geir, Nakabeppu, Yusaku, Bredy, Timothy W., Klungland, Arne and Bjoras, Magnar (2015). Synergistic Actions of Ogg1 and Mutyh DNA Glycosylases Modulate Anxiety-like Behavior in Mice. Cell Reports, 13 (12), 2671-2678. doi: 10.1016/j.celrep.2015.12.001

Synergistic Actions of Ogg1 and Mutyh DNA Glycosylases Modulate Anxiety-like Behavior in Mice

2015

Journal Article

Persistent variations in neuronal DNA methylation following cocaine self-administration and protracted abstinence in mice

Baker-Andresen, Danay, Zhao, Qiongyi, Li, Xiang, Jupp, Bianca, Chesworth, Rose, Lawrence, Andrew J. and Bredy, Timothy (2015). Persistent variations in neuronal DNA methylation following cocaine self-administration and protracted abstinence in mice. Neuroepigenetics, 4, 1-11. doi: 10.1016/j.nepig.2015.10.001

Persistent variations in neuronal DNA methylation following cocaine self-administration and protracted abstinence in mice

2015

Journal Article

Extended Cocaine Access Results in a Distinct Epigenetic Alterations to the Homer2 Gene in the Dorsal Medial Prefrontal Cortex

Ploense, Kyle, Carr, Amanda, Baker‐Andresen, Danay, Li, Xiang, Sun, Yi, Bredy, Timothy and Kippin, Tod (2015). Extended Cocaine Access Results in a Distinct Epigenetic Alterations to the Homer2 Gene in the Dorsal Medial Prefrontal Cortex. The FASEB Journal, 29 (S1). doi: 10.1096/fasebj.29.1_supplement.705.11

Extended Cocaine Access Results in a Distinct Epigenetic Alterations to the Homer2 Gene in the Dorsal Medial Prefrontal Cortex

2015

Journal Article

Long noncoding RNA-directed epigenetic regulation of gene expression is associated with anxiety-like behavior in mice

Spadaro, Paola A., Flavell, Charlotte R., Widagdo, Jocelyn, Ratnu, Vikram S., Troup, Michael, Ragan, Chikako, Mattick, John S. and Bredy, Timothy W. (2015). Long noncoding RNA-directed epigenetic regulation of gene expression is associated with anxiety-like behavior in mice. Biological Psychiatry, 78 (12), 848-859. doi: 10.1016/j.biopsych.2015.02.004

Long noncoding RNA-directed epigenetic regulation of gene expression is associated with anxiety-like behavior in mice

2014

Journal Article

Activation-induced cytidine deaminase regulates activity-dependent BDNF expression in post-mitotic cortical neurons

Ratnu, Vikram S., Wei, Wei and Bredy, Timothy W. (2014). Activation-induced cytidine deaminase regulates activity-dependent BDNF expression in post-mitotic cortical neurons. European Journal of Neuroscience, 40 (7), 3032-3039. doi: 10.1111/ejn.12678

Activation-induced cytidine deaminase regulates activity-dependent BDNF expression in post-mitotic cortical neurons

2014

Journal Article

Methyl CpG Binding Domain Ultra-Sequencing: a novel method for identifying inter-individual and cell-type-specific variation in DNA methylation

Li, X., Baker-Andresen, D., Zhao, Q., Marshall, V. and Bredy, T. W. (2014). Methyl CpG Binding Domain Ultra-Sequencing: a novel method for identifying inter-individual and cell-type-specific variation in DNA methylation. Genes, Brain and Behavior, 13 (7), 721-731. doi: 10.1111/gbb.12150

Methyl CpG Binding Domain Ultra-Sequencing: a novel method for identifying inter-individual and cell-type-specific variation in DNA methylation

2014

Journal Article

Neocortical Tet3-mediated accumulation of 5-hydroxymethylcytosine promotes rapid behavioral adaptation

Li, Xiang, Wei, Wei, Zhao, Qiong-Yi, Widagdo, Jocelyn, Baker-Andresen, Danay, Flavell, Charlotte R., D'Alessio, Ana, Zhang, Yi and Bredy, Timothy W. (2014). Neocortical Tet3-mediated accumulation of 5-hydroxymethylcytosine promotes rapid behavioral adaptation. Proceedings of the National Academy of Sciences, 111 (19), 7120-7125. doi: 10.1073/pnas.1318906111

Neocortical Tet3-mediated accumulation of 5-hydroxymethylcytosine promotes rapid behavioral adaptation

2014

Journal Article

Persistent prelimbic cortex activity contributes to enhanced learned fear expression in females

Fenton, Georgina E., Pollard, Amelia K, Halliday, David M., Mason, Rob, Bredy, Timothy W. and Stevenson, Carl W. (2014). Persistent prelimbic cortex activity contributes to enhanced learned fear expression in females. Learning and Memory, 21 (2), 55-60. doi: 10.1101/lm.033514.113

Persistent prelimbic cortex activity contributes to enhanced learned fear expression in females

2013

Journal Article

Mechanisms governing the reactivation-dependent destabilization of memories and their role in extinction

Flavell, Charlotte R., Lambert, Elliot A., Winters, Boyer D. and Bredy, Timothy W. (2013). Mechanisms governing the reactivation-dependent destabilization of memories and their role in extinction. Frontiers in Behavioral Neuroscience, 7 (DEC) 214, 214.1-214.11. doi: 10.3389/fnbeh.2013.00214

Mechanisms governing the reactivation-dependent destabilization of memories and their role in extinction

2013

Journal Article

Exposure to histone deacetylase inhibitors during Pavlovian conditioning enhances subsequent cue-induced reinstatement of operant behavior

Ploense, Kyle L., Kerstetter, Kerry A., Wade, Matthew A., Woodward, Nicholas C., Maliniak, Dan, Reyes, Michael, Uchizono, Russell S., Bredy, Timothy W. and Kippin, Tod E. (2013). Exposure to histone deacetylase inhibitors during Pavlovian conditioning enhances subsequent cue-induced reinstatement of operant behavior. Behavioural Pharmacology, 24 (3), 164-171. doi: 10.1097/FBP.0b013e32836104ea

Exposure to histone deacetylase inhibitors during Pavlovian conditioning enhances subsequent cue-induced reinstatement of operant behavior

2013

Journal Article

Activation of BDNF signaling prevents the return of fear in female mice

Baker-Andresen, Danay, Flavell, Charlotte R., Li, Xiang and Bredy, Timothy W. (2013). Activation of BDNF signaling prevents the return of fear in female mice. Learning & Memory, 20 (5), 237-240. doi: 10.1101/lm.029520.112

Activation of BDNF signaling prevents the return of fear in female mice

2013

Journal Article

The amygdala and medial prefrontal cortex: partners in the fear circuit

Marek, Roger, Strobel, Cornelia, Bredy, Timothy W. and Sah, Pankaj (2013). The amygdala and medial prefrontal cortex: partners in the fear circuit. Journal of Physiology, 591 (10), 2381-2391. doi: 10.1113/jphysiol.2012.248575

The amygdala and medial prefrontal cortex: partners in the fear circuit

2013

Journal Article

Dynamic DNA methylation: a prime candidate for genomic metaplasticity and behavioral adaptation

Baker-Andresen, Danay, Ratnu, Vikram and Bredy, Timothy (2013). Dynamic DNA methylation: a prime candidate for genomic metaplasticity and behavioral adaptation. Trends In Neurosciences, 36 (1), 3-13. doi: 10.1016/j.tins.2012.09.003

Dynamic DNA methylation: a prime candidate for genomic metaplasticity and behavioral adaptation

2013

Journal Article

On the potential role of active DNA demethylation in establishing epigenetic states associated with neural plasticity and memory

Li, Xiang, Wei, Wei, Ratnu, Vikram and Bredy, Timothy (2013). On the potential role of active DNA demethylation in establishing epigenetic states associated with neural plasticity and memory. Neurobiology of Learning and Memory, 105, 125-132. doi: 10.1016/j.nlm.2013.06.009

On the potential role of active DNA demethylation in establishing epigenetic states associated with neural plasticity and memory

2013

Journal Article

The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing

Barry, Guy, Briggs, J. A., Vanichkina, D. P., Poth, E. M., Beveridge, N. J., Vikram Ratnu, Nayler, S. P., Nones, K., Hu, J., Timothy Bredy, Nakagawa, S., Rigo, F., Taft, R. J., Cairns, M. J., Blackshaw, S., Wolvetang, E. J. and Mattick, J. S. (2013). The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing. Molecular Psychiatry, 19 (4), 486-494. doi: 10.1038/mp.2013.45

The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing