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2025 Journal Article Minimally invasive biomarkers for triaging lung nodules—challenges and future perspectivesAfridi, Waqar Ahmed, Picos, Samandra Hernandez, Bark, Juliana Muller, Stamoudis, Danyelle Assis Ferreira, Vasani, Sarju, Irwin, Darryl, Fielding, David and Punyadeera, Chamindie (2025). Minimally invasive biomarkers for triaging lung nodules—challenges and future perspectives. Cancer and Metastasis Reviews, 44 (1) 29, 1. doi: 10.1007/s10555-025-10247-5 |
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2024 Journal Article Performance of somatic structural variant calling in lung cancer using Oxford Nanopore sequencing technologyLiu, Lingchen, Zhang, Jia, Wood, Scott, Newell, Felicity, Leonard, Conrad, Koufariotis, Lambros T., Nones, Katia, Dalley, Andrew J., Chittoory, Haarika, Bashirzadeh, Farzad, Son, Jung Hwa, Steinfort, Daniel, Williamson, Jonathan P., Bint, Michael, Pahoff, Carl, Nguyen, Phan T., Twaddell, Scott, Arnold, David, Grainge, Christopher, Simpson, Peter T., Fielding, David, Waddell, Nicola and Pearson, John V. (2024). Performance of somatic structural variant calling in lung cancer using Oxford Nanopore sequencing technology. BMC genomics, 25 (1) 898. doi: 10.1186/s12864-024-10792-3 |
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2024 Journal Article Glycan profiling in small extracellular vesicles with a SERS microfluidic biosensor identifies early malignant development in lung cancerZhou, Quan, Niu, Xueming, Zhang, Zhen, O'Byrne, Kenneth, Kulasinghe, Arutha, Fielding, David, Möller, Andreas, Wuethrich, Alain, Lobb, Richard J. and Trau, Matt (2024). Glycan profiling in small extracellular vesicles with a SERS microfluidic biosensor identifies early malignant development in lung cancer. Advanced Science, 11 (33) 2401818, 1-12. doi: 10.1002/advs.202401818 |
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2024 Journal Article World Association for Bronchology and Interventional Pulmonology (WABIP) guidelines on airway stenting for malignant central airway obstructionChaddha, Udit, Agrawal, Abhinav, Kurman, Jonathan, Ortiz‐Comino, Rosamaria, Dutau, Herve, Freitag, Lutz, Trisolini, Rocco, Dooms, Christophe, Zuccatosta, Lina, Gasparini, Stefano, Herth, Felix, Saka, Hideo, Lee, Pyng, Fielding, David, Oki, Masahide, Rosell, Antoni and Murgu, Septimiu (2024). World Association for Bronchology and Interventional Pulmonology (WABIP) guidelines on airway stenting for malignant central airway obstruction. Respirology, 29 (7), 563-573. doi: 10.1111/resp.14764 |
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2024 Journal Article The diagnostic yield of Cone Beam computed tomography combined with radial-endobronchial ultrasound for the diagnosis of peripheral pulmonary nodules: systematic review and meta-analysisBrown, Michael V., Badiei, Arash, Arnold, Matthew, Jersmann, Hubertus, Sullivan, Thomas, Fielding, David and Nguyen, Phan (2024). The diagnostic yield of Cone Beam computed tomography combined with radial-endobronchial ultrasound for the diagnosis of peripheral pulmonary nodules: systematic review and meta-analysis. CHEST Pulmonary, 2 (2) 100037. doi: 10.1016/j.chpulm.2024.100037 |
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2024 Journal Article Evaluation of Endobronchial Ultrasound-Guided Transbronchial Needle Aspiration (EBUS-TBNA) samples from advanced non-small cell lung cancer for whole genome, whole exome and comprehensive panel sequencingFielding, David, Lakis, Vanessa, Dalley, Andrew J., Chittoory, Haarika, Newell, Felicity, Koufariotis, Lambros T., Patch, Ann-Marie, Kazakoff, Stephen, Bashirzadeh, Farzad, Son, Jung Hwa, Ryan, Kimberley, Steinfort, Daniel, Williamson, Jonathan P., Bint, Michael, Pahoff, Carl, Nguyen, Phan Tien, Twaddell, Scott, Arnold, David, Grainge, Christopher, Pattison, Andrew, Fairbairn, David, Gune, Shailendra, Christie, Jemma, Holmes, Oliver, Leonard, Conrad, Wood, Scott, Pearson, John V., Lakhani, Sunil R., Waddell, Nicola ... Nones, Katia (2024). Evaluation of Endobronchial Ultrasound-Guided Transbronchial Needle Aspiration (EBUS-TBNA) samples from advanced non-small cell lung cancer for whole genome, whole exome and comprehensive panel sequencing. Cancers, 16 (4) 785. doi: 10.3390/cancers16040785 |
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2024 Journal Article Cone‐beam <scp>CT</scp> imaging for robotic navigation bronchoscopyFielding, David and van der Heijden, Erik H. F. M. (2024). Cone‐beam CT imaging for robotic navigation bronchoscopy. Respirology, 29 (4), 274-276. doi: 10.1111/resp.14654 |
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2024 Journal Article Comparison of nasopharyngeal swab vs. lower respiratory tract specimen PCR for the diagnosis of Pneumocystis jirovecii pneumoniaChew, Rusheng, Tozer, Sarah, Ulett, Kimberly, Paterson, David L., Whiley, David, Sloots, Theo, Fielding, David, Zappala, Christopher, Bashirzadeh, Farzad, Hundloe, Justin, Bletchley, Cheryl and Woods, Marion L. (2024). Comparison of nasopharyngeal swab vs. lower respiratory tract specimen PCR for the diagnosis of Pneumocystis jirovecii pneumonia. Open Forum Infectious Diseases, 11 (3) ofae071, ofae071. doi: 10.1093/ofid/ofae071 |
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2024 Journal Article Systematic endoscopic staging of mediastinum to guide radiotherapy planning in patients with locally advanced non-small-cell lung cancer (SEISMIC): an international, multicentre, single-arm, clinical trialSteinfort, Daniel P, Kothari, Gargi, Wallace, Neil, Hardcastle, Nicholas, Rangamuwa, Kanishka, Dieleman, Edith M T, Lee, Percy, Li, Peixuan, Simpson, Julie A, Yo, Shaun, Bashirdazeh, Farzad, Nguyen, Phan, Jennings, Barton R, Fielding, David, Crombag, Laurence, Irving, Louis B, Yasufuku, Kazuhiro, Annema, Jouke T, Ost, David E and Siva, Shankar (2024). Systematic endoscopic staging of mediastinum to guide radiotherapy planning in patients with locally advanced non-small-cell lung cancer (SEISMIC): an international, multicentre, single-arm, clinical trial. The Lancet Respiratory Medicine, 12 (6), 467-475. doi: 10.1016/S2213-2600(24)00010-9 |
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2023 Journal Article Discrepancies in tumor mutation burden reporting from sequential endobronchial ultrasound transbronchial needle aspiration samples within single lymph node stations - brief reportFielding, David, Dalley, Andrew J., Singh, Mahendra, Nandakumar, Lakshmy, Lakis, Vanessa, Chittoory, Haarika, Fairbairn, David, Patch, Ann-Marie, Kazakoff, Stephen H., Ferguson, Kaltin, Bashirzadeh, Farzad, Bint, Michael, Pahoff, Carl, Son, Jung Hwa, Ryan, Kimberley, Hodgson, Alan, Sharma, Sowmya, Pearson, John V., Waddell, Nicola, Lakhani, Sunil R., Hartel, Gunter, Simpson, Peter T. and Nones, Katia (2023). Discrepancies in tumor mutation burden reporting from sequential endobronchial ultrasound transbronchial needle aspiration samples within single lymph node stations - brief report. Frontiers in Oncology, 13 1259882, 1-10. doi: 10.3389/fonc.2023.1259882 |
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2023 Journal Article Whole genome sequencing in advanced lung cancer can be performed using diff-quik cytology smears derived from endobronchial ultrasound, transbronchial needle aspiration (EBUS TBNA)Fielding, David, Dalley, Andrew J., Singh, Mahendra, Nandakumar, Lakshmy, Lakis, Vanessa, Chittoory, Haarika, Fairbairn, David, Ferguson, Kaltin, Bashirzadeh, Farzad, Bint, Michael, Pahoff, Carl, Son, Jung Hwa, Hodgson, Alan, Pearson, John V., Waddell, Nicola, Lakhani, Sunil R., Hartel, Gunter, Nones, Katia and Simpson, Peter T. (2023). Whole genome sequencing in advanced lung cancer can be performed using diff-quik cytology smears derived from endobronchial ultrasound, transbronchial needle aspiration (EBUS TBNA). Lung, 201 (4), 407-413. doi: 10.1007/s00408-023-00631-9 |
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2023 Journal Article Evaluating Diff‐Quik cytology smears for large‐panel mutation testing in lung cancer—Predicting DNA content and success with low‐malignant‐cellularity samplesFielding, David I., Dalley, Andrew J., Singh, Mahendra, Nandakumar, Lakshmy, Lakis, Vanessa, Chittoory, Haarika, Fairbairn, David, Patch, Ann‐Marie, Kazakoff, Stephen H., Ferguson, Kaltin, Bashirzadeh, Farzad, Bint, Michael, Pahoff, Carl, Son, Jung Hwa, Hodgson, Alan, Sharma, Sowmya, Waddell, Nicola, Lakhani, Sunil R., Hartel, Gunter, Nones, Katia and Simpson, Peter T. (2023). Evaluating Diff‐Quik cytology smears for large‐panel mutation testing in lung cancer—Predicting DNA content and success with low‐malignant‐cellularity samples. Cancer Cytopathology, 131 (6), 373-382. doi: 10.1002/cncy.22690 |
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2023 Journal Article High-definition videobronchoscopy for the diagnosis of airway involvement in sarcoidosis: the enhance sarcoidosis multicenter studyLivi, Vanina, Sivokozov, Ilya, Annema, Jouke T., Candoli, Piero, Vasilev, Igor, Kramer, Tess, Ferrari, Marco, Madan, Karan, Fielding, David, Murgu, Septimiu, Cancellieri, Alessandra, Semyonova, Lyudmila A., Puci, Mariangela, Sotgiu, Giovanni and Trisolini, Rocco (2023). High-definition videobronchoscopy for the diagnosis of airway involvement in sarcoidosis: the enhance sarcoidosis multicenter study. Chest, 164 (5), 1243-1252. doi: 10.1016/j.chest.2023.04.034 |
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2023 Journal Article Assessment of background plastics contamination from human respiratory tract sample collection vesselsOkoffo, Elvis D., Rauert, Cassandra, Boots, Robert, Fielding, David, Bashiradeh, Farzard, Singh, Mahendra and Thomas, Kevin V. (2023). Assessment of background plastics contamination from human respiratory tract sample collection vessels. Water Emerging Contaminants and Nanoplastics, 1 (1) 4, 1-9. doi: 10.20517/wecn.2022.22 |
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2023 Journal Article Australian genomics: outcomes of a 5-year national program to accelerate the integration of genomics in healthcareStark, Zornitza, Boughtwood, Tiffany, Haas, Matilda, Braithwaite, Jeffrey, Gaff, Clara L., Goranitis, Ilias, Spurdle, Amanda B., Hansen, David P., Hofmann, Oliver, Laing, Nigel, Metcalfe, Sylvia, Newson, Ainsley J., Scott, Hamish S., Thorne, Natalie, Ward, Robyn L., Dinger, Marcel E., Best, Stephanie, Long, Janet C., Grimmond, Sean M., Pearson, John, Waddell, Nicola, Barnett, Christopher P., Cook, Matthew, Field, Michael, Fielding, David, Fox, Stephen B., Gecz, Jozef, Jaffe, Adam, Leventer, Richard J. ... North, Kathryn N. (2023). Australian genomics: outcomes of a 5-year national program to accelerate the integration of genomics in healthcare. American Journal of Human Genetics, 110 (3), 419-426. doi: 10.1016/j.ajhg.2023.01.018 |
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2023 Journal Article Digital decoding of single extracellular vesicle phenotype differentiates early malignant and benign lung lesionsLi, Junrong, Sina, Abu A. I., Antaw, Fiach, Fielding, David, Möller, Andreas, Lobb, Richard, Wuethrich, Alain and Trau, Matt (2023). Digital decoding of single extracellular vesicle phenotype differentiates early malignant and benign lung lesions. Advanced Science, 10 (1) 2204207, e2204207. doi: 10.1002/advs.202204207 |
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2022 Journal Article Prospective optimization of endobronchial ultrasound-guided transbronchial needle aspiration lymph node assessment for lung cancer: Three needle agitations are noninferior to 10 agitations for adequate tumor cell and DNA yieldFielding, David, Dalley, Andrew J., Singh, Mahendra, Nandakumar, Lakshmy, Nones, Katia, Lakis, Vanessa, Chittoory, Haarika, Ferguson, Kaltin, Bashirzadeh, Farzad, Bint, Michael, Pahoff, Carl, Son, Jung Hwa, Hodgson, Alan, Sharma, Sowmya, Godbolt, David, Coleman, Kylie, Whitfield, Lenore, Waddell, Nicola, Lakhani, Sunil R., Hartel, Gunter and Simpson, Peter T. (2022). Prospective optimization of endobronchial ultrasound-guided transbronchial needle aspiration lymph node assessment for lung cancer: Three needle agitations are noninferior to 10 agitations for adequate tumor cell and DNA yield. JTO Clinical and Research Reports, 3 (10) 100403, 100403. doi: 10.1016/j.jtocrr.2022.100403 |
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2022 Journal Article Systematic endoscopic staging of mediastinum to determine impact on radiotherapy for locally advanced lung cancer (SEISMIC): protocol for a prospective single arm multicentre interventional studySteinfort, Daniel P., Siva, Shankar, Rangamuwa, Kanishka, Lee, Percy, Fielding, David, Nguyen, Phan, Jennings, Barton R., Yo, Shaun, Hardcastle, Nick, Kothari, Gargi, Crombag, Laurence, Annema, Jouke, Yasufuku, Kazuhiro, Ost, David E. and Irving, Louis B. (2022). Systematic endoscopic staging of mediastinum to determine impact on radiotherapy for locally advanced lung cancer (SEISMIC): protocol for a prospective single arm multicentre interventional study. BMC Pulmonary Medicine, 22 (1) 364. doi: 10.1186/s12890-022-02159-9 |
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2022 Journal Article Comparison of actionable events detected in cancer genomes by whole-genome sequencing, in silico whole-exome and mutation panelsRamarao-Milne, P, Kondrashova, O, Patch, A-M, Nones, K, Koufariotis, L T, Newell, F, Addala, V, Lakis, V, Holmes, O, Leonard, C, Wood, S, Xu, Q, Mukhopadhyay, P, Naeini, M M, Steinfort, D, Williamson, J P, Bint, M, Pahoff, C, Nguyen, P T, Twaddell, S, Arnold, D, Grainge, C, Basirzadeh, F, Fielding, D, Dalley, A J, Chittoory, H, Simpson, P T, Aoude, L G, Bonazzi, V F ... Waddell, N (2022). Comparison of actionable events detected in cancer genomes by whole-genome sequencing, in silico whole-exome and mutation panels. ESMO Open, 7 (4) 100540, 1-11. doi: 10.1016/j.esmoop.2022.100540 |
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2022 Journal Article Using the GenCut core biopsy tool with the radial endobronchial ultrasound guide sheath enables a high-quality histology sample capable of programmed cell death ligand 1 (PD-L1) testingHerath, Samantha, Bashirzadeh, Farzad, Mahajan, Hema, Ing, Alvin and Fielding, David (2022). Using the GenCut core biopsy tool with the radial endobronchial ultrasound guide sheath enables a high-quality histology sample capable of programmed cell death ligand 1 (PD-L1) testing. Respirology Case Reports, 10 (5) e0935, 1-4. doi: 10.1002/rcr2.935 |
