Overview
Availability
- Dr Oleksandra Rudenko is:
- Available for supervision
Qualifications
- Doctor of Philosophy, The University of Queensland
Works
Search Professor Oleksandra Rudenko’s works on UQ eSpace
2024
Journal Article
Extraction of high‐molecular‐weight DNA from <i>Streptococcus</i> spp. for nanopore sequencing in resource‐limited settings
Das, Suvra, Delamare‐Deboutteville, JérÔme, Barnes, Andrew C. and Rudenko, Oleksandra (2024). Extraction of high‐molecular‐weight DNA from Streptococcus spp. for nanopore sequencing in resource‐limited settings. MicrobiologyOpen, 13 (4) e1432, e1432. doi: 10.1002/mbo3.1432
2024
Journal Article
Serological and molecular typing of Tenacibaculum maritimum from New Zealand farmed salmon, Oncorhynchus tshawytscha
Kumanan, Karthiga, Delisle, Lizenn, Angelucci, Connie, Hunter, Ryan B.J., Rudenko, Oleksandra, Carson, Jeremy, Morrison, Richard N., Barnes, Andrew C. and Hutson, Kate S. (2024). Serological and molecular typing of Tenacibaculum maritimum from New Zealand farmed salmon, Oncorhynchus tshawytscha. Aquaculture, 578 740055, 1-13. doi: 10.1016/j.aquaculture.2023.740055
2023
Journal Article
Transforming the untransformable with knockout minicircles: high‐efficiency transformation and vector‐free allelic exchange knockout in the fish pathogen Photobacterium damselae
Rudenko, Oleksandra, Baseggio, Laura, McGuigan, Fynn and Barnes, Andrew C. (2023). Transforming the untransformable with knockout minicircles: high‐efficiency transformation and vector‐free allelic exchange knockout in the fish pathogen Photobacterium damselae. MicrobiologyOpen, 12 (4) e1374, e1374. doi: 10.1002/mbo3.1374
2022
Journal Article
The evolution of a specialized, highly virulent fish pathogen through gene loss and acquisition of host-specific survival mechanisms
Baseggio, Laura, Rudenko, Oleksandra, Engelstädter, Jan and Barnes, Andrew C. (2022). The evolution of a specialized, highly virulent fish pathogen through gene loss and acquisition of host-specific survival mechanisms. Applied and Environmental Microbiology, 88 (14) e0022222, 1-19. doi: 10.1128/aem.00222-22
2022
Journal Article
A high-quality reference genome for the fish pathogen Streptococcus iniae
Alsheikh-Hussain, Areej S., Ben Zakour, Nouri L., Forde, Brian M., Rudenko, Oleksandra, Barnes, Andrew C. and Beatson, Scott A. (2022). A high-quality reference genome for the fish pathogen Streptococcus iniae. Microbial Genomics, 8 (3) 000777. doi: 10.1099/mgen.0.000777
2021
Journal Article
Autogenous vaccination in aquaculture: a locally enabled solution towards reduction of the global antimicrobial resistance problem
Barnes, Andrew C., Rudenko, Oleksandra, Landos, Matt, Dong, Ha Thanh, Lusiastuti, Angela, Phuoc, Le Hong and Delamare‐Deboutteville, Jerome (2021). Autogenous vaccination in aquaculture: a locally enabled solution towards reduction of the global antimicrobial resistance problem. Reviews in Aquaculture, 14 (2), 907-918. doi: 10.1111/raq.12633
2021
Journal Article
Molecular investigation of recurrent Streptococcus iniae epizootics affecting coral reef fish on an oceanic island suggests at least two distinct emergence events
Irion, Solène, Silayeva, Oleksandra, Sweet, Michael, Chabanet, Pascale, Barnes, Andrew C., Tortosa, Pablo and Séré, Mathieu G. (2021). Molecular investigation of recurrent Streptococcus iniae epizootics affecting coral reef fish on an oceanic island suggests at least two distinct emergence events. Frontiers in Microbiology, 12 749734, 749734. doi: 10.3389/fmicb.2021.749734
2021
Journal Article
Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants
Baseggio, Laura, Rudenko, Oleksandra, Buller, Nicky, Landos, Matt, Englestädter, Jan and Barnes, Andrew C. (2021). Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants. Microbial Genomics, 7 (4) 000562, 1-14. doi: 10.1099/mgen.0.000562
2020
Journal Article
Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapes
Rudenko, Oleksandra, Engelstädter, Jan and Barnes, Andrew C. (2020). Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapes. Infection, Genetics and Evolution, 85 104435, 104435. doi: 10.1016/j.meegid.2020.104435
2019
Other Outputs
The role of heritable mutators in evolution and epidemiology of bacterial pathogens
Silayeva, Oleksandra (2019). The role of heritable mutators in evolution and epidemiology of bacterial pathogens. PhD Thesis, School of Biological Sciences, The University of Queensland. doi: 10.14264/uql.2019.201
2017
Journal Article
Gibson Assembly facilitates bacterial allelic exchange mutagenesis
Rudenko, Oleksandra and Barnes, Andrew C. (2017). Gibson Assembly facilitates bacterial allelic exchange mutagenesis. Journal of Microbiological Methods, 144, 157-163. doi: 10.1016/j.mimet.2017.11.023
2016
Journal Article
Vaccination against streptococcal infections in farmed fish
Barnes, Andrew C. and Rudenko, Oleksandra (2016). Vaccination against streptococcal infections in farmed fish. Microbiology Australia, 37 (3), 118-121. doi: 10.1071/MA16040
Supervision
Availability
- Dr Oleksandra Rudenko is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Using low-cost state of the art technology and big data to help smallholder fish farmers to diagnose and control disease
Associate Advisor
Other advisors: Associate Professor Scott Beatson, Professor Andrew Barnes
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Doctor Philosophy
Using low-cost state of the art technology and big data to help smallholder fish farmers to diagnose and control disease
Associate Advisor
Other advisors: Associate Professor Scott Beatson, Professor Andrew Barnes
-
Doctor Philosophy
Design and evaluation of oral vaccines for barramundi based on microparticle technology
Associate Advisor
Other advisors: Dr Alberto Baldelli, Professor Andrew Barnes
Completed supervision
-
2024
Doctor Philosophy
Evolution of pathogenesis: Photobacterium damselae as a model for adaptive evolution of host specialisation
Associate Advisor
Other advisors: Associate Professor Jan Engelstaedter, Professor Andrew Barnes
Media
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