
Overview
Background
Dr. Ong is an exceptional and driven researcher in the field of Animal Health, and her work revolves around studying pathogen genomes, transcriptomes, and host-associated metagenomes to enhance animals' resistance to diseases and improve their overall health and productivity.
One remarkable aspect of Dr. Ong's expertise is her versatility and enthusiasm for both wet lab and dry lab (bioinformatics) work. She finds equal joy in conducting hands-on experiments in the wet lab and diving into data analysis and computational work in the bioinformatics domain. This multidisciplinary approach empowers her to gain comprehensive insights into her research subjects and tackle complex challenges from various angles. Dr. Ong's vast skillset encompasses molecular biology and expertise in utilizing 2nd and 3rd generation sequencing technologies, along with her proficiency in bioinformatics tools and techniques. This diverse knowledge allows her to explore and employ cutting-edge methodologies, providing her with a unique advantage in her research endeavors.
One of Dr. Ong's significant achievements was conducting the first cattle reproductive tract metagenomic study in Australia. This groundbreaking study likely contributed valuable information about the reproductive health of cattle and opened new avenues for further research in this area. Additionally, her contributions extend to the assembly of complete genomes for multiple pathogens, such as Campylobacter fetus and Bovicola ovis. This accomplishment is instrumental in understanding these pathogens' genetic makeup, evolution, and mechanisms of infection, which is vital in developing targeted strategies to combat diseases affecting animals.
Keywords: Microbiome and Metagenomics, Pathogen genomics, Animal health, PCR, Sequencing, Host-microbe interactions
Availability
- Dr Chian Teng Ong is:
- Available for supervision
Fields of research
Qualifications
- Bachelor (Honours) of Biotechnology, The University of Queensland
- Doctor of Philosophy of Agricultural Biotechnology, The University of Queensland
Research interests
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Host-pathogen interaction, Microbiome and Metagenome
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Pathogen genomic and biomarker studies
Works
Search Professor Chian Teng Ong’s works on UQ eSpace
2024
Journal Article
Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation
Ong, Chian Teng, Blackall, Patrick. J., Boe-Hansen, Gry B., deWet, Sharon, Hayes, Ben J., Indjein, Lea, Korolik, Victoria, Minchin, Catherine, Nguyen, Loan To, Nordin, Yusralimuna, Siddle, Hannah, Turni, Conny, Venus, Bronwyn, Westman, Mark E., Zhang, Zhetao and Tabor, Ala E. (2024). Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation. Frontiers in Microbiology, 15 1452564. doi: 10.3389/fmicb.2024.1452564
2024
Journal Article
A systematic review of predictive, diagnostic, and prognostic biomarkers for detecting reproductive diseases in cattle using traditional and omics approaches
Juli, Mst Sogra Banu, Boe-Hansen, Gry B., Raza, Ali, Forutan, Mehrnush, Ong, Chian Teng, Siddle, Hannah V. and Tabor, Ala E. (2024). A systematic review of predictive, diagnostic, and prognostic biomarkers for detecting reproductive diseases in cattle using traditional and omics approaches. Journal of Reproductive Immunology, 165 104315, 104315. doi: 10.1016/j.jri.2024.104315
2024
Journal Article
Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis
Ong, Chian Teng, Mody, Karishma T., Cavallaro, Antonino S., Yan, Yakun, Nguyen, Loan T., Shao, Renfu, Mitter, Neena, Mahony, Timothy J. and Ross, Elizabeth M. (2024). Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis. International Journal of Molecular Sciences, 25 (14) 7824, 1-15. doi: 10.3390/ijms25147824
2023
Conference Publication
New diagnostic tools for bovine vibriosis
Tabor, Ala, Siddle, Hannah, Juli, Sogra Banu, Raza, Ali, Ong, Chian Teng, McCosker, Kieren, Hayes, Ben and Boe-Hansen, Gry (2023). New diagnostic tools for bovine vibriosis. Northern Beef Research Update Conference, Darwin, NT Australia, 22-25 August 2023.
2022
Journal Article
Adaptive sampling during sequencing reveals the origins of the bovine reproductive tract microbiome across reproductive stages and sexes
Ong, Chian Teng, Ross, Elizabeth M., Boe-Hansen, Gry, Turni, Conny, Hayes, Ben J., Fordyce, Geoffry and Tabor, Ala E. (2022). Adaptive sampling during sequencing reveals the origins of the bovine reproductive tract microbiome across reproductive stages and sexes. Scientific reports, 12 (1) 15075, 1-12. doi: 10.1038/s41598-022-19022-w
2022
Journal Article
Role of Staphylococcus agnetis and Staphylococcus hyicus in the pathogenesis of buffalo fly skin lesions in cattle
Naseem, Muhammad Noman, Turni, Conny, Gilbert, Rosalind, Raza, Ali, Allavena, Rachel, McGowan, Michael, Constantinoiu, Constantin, Ong, Chian Teng, Tabor, Ala E. and James, Peter (2022). Role of Staphylococcus agnetis and Staphylococcus hyicus in the pathogenesis of buffalo fly skin lesions in cattle. Microbiology Spectrum, 10 (4) e0087322, 1-18. doi: 10.1128/spectrum.00873-22
2022
Other Outputs
Pathogenomics of bovine infertility in northern Australia
Ong, Chian Teng (2022). Pathogenomics of bovine infertility in northern Australia. PhD Thesis, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland. doi: 10.14264/4b69697
2022
Journal Article
Evaluation of host depletion and extraction methods for shotgun metagenomic analysis of bovine vaginal samples
Ong, Chian Teng, Boe-Hansen, Gry, Ross, Elizabeth M., Blackall, Patrick J., Turni, Conny, Hayes, Ben J. and Tabor, Ala E. (2022). Evaluation of host depletion and extraction methods for shotgun metagenomic analysis of bovine vaginal samples. Microbiology Spectrum, 10 (2), e0041221. doi: 10.1128/spectrum.00412-21
2022
Journal Article
Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing
Ong, Chian Teng, Ross, Elizabeth M., Boe-Hansen, Gry B., Turni, Conny, Hayes, Ben J. and Tabor, Ala E. (2022). Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing. Journal of Animal Science, 100 (1) skab344. doi: 10.1093/jas/skab344
2021
Journal Article
Interrogating the bovine reproductive tract metagenomes using culture-independent approaches: a systematic review
Ong, Chian Teng, Turni, Conny, Blackall, Patrick J., Boe-Hansen, Gry, Hayes, Ben J. and Tabor, Ala E. (2021). Interrogating the bovine reproductive tract metagenomes using culture-independent approaches: a systematic review. Animal Microbiome, 3 (1) 41, 41. doi: 10.1186/s42523-021-00106-3
2018
Journal Article
Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus
Rodriguez-Valle, Manuel, Moolhuijzen, Paula, Barrero, Roberto A., Ong, Chian Teng, Busch, Greta, Karbanowicz, Thomas, Booth, Mitchell, Clark, Richard, Koehbach, Johannes, Ijaz, Hina, Broady, Kevin, Agnew, Kim, Knowles, Aleta G., Bellgard, Matthew I. and Tabor, Ala E. (2018). Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus. International Journal for Parasitology, 48 (1), 71-82. doi: 10.1016/j.ijpara.2017.07.007
2014
Conference Publication
A glance into sialome of Australian paralysis tick - Ixodes holocyclus
Ong, Chian Teng, Rodriguez-Valle, Manuel and Lew-Tabor, Ala (2014). A glance into sialome of Australian paralysis tick - Ixodes holocyclus. 2nd Annual International Conference on Advances in Veterinary Science Research (VETSCI 2014), Singapore, Singapore, 24-25 November 2014. Global Science & Technology Forum (GSTF). doi: 10.5176/2382-5685_vetsci14.40
Supervision
Availability
- Dr Chian Teng Ong is:
- Available for supervision
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Available projects
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Method development - effective ways to study host-microbe interaction
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Pathogen genomic study for biomarket identification
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Literature studies - endangering diseases in Australia livestock industry
Supervision history
Current supervision
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Doctor Philosophy
Unravelling the genomic and epigenetic complexity of the rumen microbiome
Associate Advisor
Other advisors: Dr Elizabeth Ross
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Doctor Philosophy
Detection of pathogens causing venereal disease in Northern beef cattle using long read sequencing.
Associate Advisor
Other advisors: Dr Hannah Siddle, Associate Professor Gry Boe-Hansen, Professor Ala Tabor
Media
Enquiries
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