Overview
Availability
- Dr Hannah Siddle is:
- Available for supervision
Works
Search Professor Hannah Siddle’s works on UQ eSpace
2024
Journal Article
Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation
Ong, Chian Teng, Blackall, Patrick. J., Boe-Hansen, Gry B., deWet, Sharon, Hayes, Ben J., Indjein, Lea, Korolik, Victoria, Minchin, Catherine, Nguyen, Loan To, Nordin, Yusralimuna, Siddle, Hannah, Turni, Conny, Venus, Bronwyn, Westman, Mark E., Zhang, Zhetao and Tabor, Ala E. (2024). Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation. Frontiers in Microbiology, 15 1452564. doi: 10.3389/fmicb.2024.1452564
2024
Journal Article
A systematic review of predictive, diagnostic, and prognostic biomarkers for detecting reproductive diseases in cattle using traditional and omics approaches
Juli, Mst Sogra Banu, Boe-Hansen, Gry B., Raza, Ali, Forutan, Mehrnush, Ong, Chian Teng, Siddle, Hannah V. and Tabor, Ala E. (2024). A systematic review of predictive, diagnostic, and prognostic biomarkers for detecting reproductive diseases in cattle using traditional and omics approaches. Journal of Reproductive Immunology, 165 104315, 104315. doi: 10.1016/j.jri.2024.104315
2024
Journal Article
Characterisation of reproductive tract microbiome and immune biomarkers for bovine genital campylobacteriosis in vaccinated and unvaccinated heifers
Juli, Mst Sogra Banu, Raza, Ali, Forutan, Mehrnush, Siddle, Hannah V., Fordyce, Geoffry, Muller, Jarud, Boe-Hansen, Gry B. and Tabor, Ala E. (2024). Characterisation of reproductive tract microbiome and immune biomarkers for bovine genital campylobacteriosis in vaccinated and unvaccinated heifers. Frontiers in Microbiology, 15 1404525. doi: 10.3389/fmicb.2024.1404525
2024
Journal Article
In vitro competition between two transmissible cancers and potential implications for their host, the Tasmanian devil
Gérard, Anne‐Lise, Owen, Rachel S., Dujon, Antoine M., Roche, Benjamin, Hamede, Rodrigo, Thomas, Frédéric, Ujvari, Beata and Siddle, Hannah V. (2024). In vitro competition between two transmissible cancers and potential implications for their host, the Tasmanian devil. Evolutionary Applications, 17 (3) ARTN e13670, e13670. doi: 10.1111/eva.13670
2023
Conference Publication
New diagnostic tools for bovine vibriosis
Tabor, Ala, Siddle, Hannah, Juli, Sogra Banu, Raza, Ali, Ong, Chian Teng, McCosker, Kieren, Hayes, Ben and Boe-Hansen, Gry (2023). New diagnostic tools for bovine vibriosis. Northern Beef Research Update Conference, Darwin, NT Australia, 22-25 August 2023.
2023
Journal Article
Exploring the landscape of Babesia bovis vaccines: progress, challenges, and opportunities
Santos, John Harvey M., Siddle, Hannah V., Raza, Ali, Stanisic, Danielle I., Good, Michael F. and Tabor, Ala E. (2023). Exploring the landscape of Babesia bovis vaccines: progress, challenges, and opportunities. Parasites and Vectors, 16 (1) 274, 1-12. doi: 10.1186/s13071-023-05885-z
2022
Journal Article
Class II transactivator induces expression of MHC-I and MHC-II in transmissible Tasmanian devil facial tumours
Ong, Chrissie E. B., Cheng, Yuanyuan, Siddle, Hannah V., Lyons, A. Bruce, Woods, Gregory M. and Flies, Andrew S. (2022). Class II transactivator induces expression of MHC-I and MHC-II in transmissible Tasmanian devil facial tumours. Open Biology, 12 (10) 220208, 1-13. doi: 10.1098/rsob.220208
2022
Journal Article
Expression of the nonclassical MHC Class I, Saha-UD in the transmissible cancer Devil Facial Tumour Disease (DFTD)
Hussey, Kathryn, Caldwell, Alison, Kreiss, Alexandre, Skjødt, Karsten, Gastaldello, Annalisa, Pye, Ruth, Hamede, Rodrigo, Woods, Gregory M. and Siddle, Hannah V. (2022). Expression of the nonclassical MHC Class I, Saha-UD in the transmissible cancer Devil Facial Tumour Disease (DFTD). Pathogens, 11 (3) 351, 1-17. doi: 10.3390/pathogens11030351
2022
Journal Article
Transmissible cancer evolution: the under-estimated role of environmental factors in the “Perfect Storm” theory
Tissot, Sophie, Gérard, Anne-Lise, Boutry, Justine, Dujon, Antoine M., Russel, Tracey, Siddle, Hannah, Tasiemski, Aurélie, Meliani, Jordan, Hamede, Rodrigo, Roche, Benjamin, Ujvari, Beata and Thomas, Frédéric (2022). Transmissible cancer evolution: the under-estimated role of environmental factors in the “Perfect Storm” theory. Pathogens, 11 (2) 241, 1-6. doi: 10.3390/pathogens11020241
2021
Journal Article
The differentiation state of the Schwann cell progenitor drives phenotypic variation between two contagious cancers
Owen, Rachel S., Ramarathinam, Sri H., Bailey, Alistair, Gastaldello, Annalisa, Hussey, Kathryn, Skipp, Paul J., Purcell, Anthony W. and Siddle, Hannah V. (2021). The differentiation state of the Schwann cell progenitor drives phenotypic variation between two contagious cancers. PLoS Pathogens, 17 (11) e1010033, 1-23. doi: 10.1371/journal.ppat.1010033
2021
Journal Article
The immunopeptidomes of two transmissible cancers and their host have a common, dominant peptide motif
Gastaldello, Annalisa, Ramarathinam, Sri H., Bailey, Alistair, Owen, Rachel, Turner, Steven, Kontouli, N., Elliott, Tim, Skipp, Paul, Purcell, Anthony W. and Siddle, Hannah V. (2021). The immunopeptidomes of two transmissible cancers and their host have a common, dominant peptide motif. Immunology, 163 (2), 169-184. doi: 10.1111/imm.13307
2021
Journal Article
Darwin, the devil, and the management of transmissible cancers
Hamede, Rodrigo, Madsen, Thomas, McCallum, Hamish, Storfer, Andrew, Hohenlohe, Paul A., Siddle, Hannah, Kaufman, Jim, Giraudeau, Mathieu, Jones, Menna, Thomas, Frédéric and Ujvari, Beata (2021). Darwin, the devil, and the management of transmissible cancers. Conservation Biology, 35 (2), 748-751. doi: 10.1111/cobi.13644
2020
Journal Article
The ecology and evolution of wildlife cancers: Applications for management and conservation
Hamede, Rodrigo, Owen, Rachel, Siddle, Hannah, Peck, Sarah, Jones, Menna, Dujon, Antoine M., Giraudeau, Mathieu, Roche, Benjamin, Ujvari, Beata and Thomas, Frédéric (2020). The ecology and evolution of wildlife cancers: Applications for management and conservation. Evolutionary Applications, 13 (7), 1719-1732. doi: 10.1111/eva.12948
2019
Journal Article
An evolutionarily conserved function of polycomb silences the MHC Class I antigen presentation pathway and enables immune evasion in cancer
Burr, Marian L., Sparbier, Christina E., Chan, Kah Lok, Chan, Yih-Chih, Kersbergen, Ariena, Lam, Enid Y.N., Azidis-Yates, Elizabeth, Vassiliadis, Dane, Bell, Charles C., Gilan, Omer, Jackson, Susan, Tan, Lavinia, Wong, Stephen Q., Hollizeck, Sebastian, Michalak, Ewa M., Siddle, Hannah V., McCabe, Michael T., Prinjha, Rab K., Guerra, Glen R., Solomon, Benjamin J., Sandhu, Shahneen, Dawson, Sarah-Jane, Beavis, Paul A., Tothill, Richard W., Cullinane, Carleen, Lehner, Paul J., Sutherland, Kate D. and Dawson, Mark A. (2019). An evolutionarily conserved function of polycomb silences the MHC Class I antigen presentation pathway and enables immune evasion in cancer. Cancer Cell, 36 (4), 385-401.e8. doi: 10.1016/j.ccell.2019.08.008
2019
Journal Article
Tracing the rise of malignant cell lines: Distribution, epidemiology and evolutionary interactions of two transmissible cancers in Tasmanian devils
James, Samantha, Jennings, Geordie, Kwon, Young Mi, Stammnitz, Maximilian, Fraik, Alexandra, Storfer, Andrew, Comte, Sebastien, Pemberton, David, Fox, Samantha, Brown, Bill, Pye, Ruth, Woods, Gregory, Lyons, Bruce, Hohenlohe, Paul A., McCallum, Hamish, Siddle, Hannah, Thomas, Frédéric, Ujvari, Beata, Murchison, Elizabeth P., Jones, Menna and Hamede, Rodrigo (2019). Tracing the rise of malignant cell lines: Distribution, epidemiology and evolutionary interactions of two transmissible cancers in Tasmanian devils. Evolutionary Applications, 12 (9), 1772-1780. doi: 10.1111/eva.12831
2019
Journal Article
Devil facial tumours: towards a vaccine
Owen, Rachel S. and Siddle, Hannah V. (2019). Devil facial tumours: towards a vaccine. Immunological Investigations, 48 (7), 719-736. doi: 10.1080/08820139.2019.1624770
2019
Journal Article
The ERBB-STAT3 axis drives Tasmanian devil facial tumor disease
Kosack, Lindsay, Wingelhofer, Bettina, Popa, Alexandra, Orlova, Anna, Agerer, Benedikt, Vilagos, Bojan, Majek, Peter, Parapatics, Katja, Lercher, Alexander, Ringler, Anna, Klughammer, Johanna, Smyth, Mark, Khamina, Kseniya, Baazim, Hatoon, de Araujo, Elvin D., Rosa, David A., Park, Jisung, Tin, Gary, Ahmar, Siawash, Gunning, Patrick T., Bock, Christoph, Siddle, Hannah V., Woods, Gregory M., Kubicek, Stefan, Murchison, Elizabeth P., Bennett, Keiryn L., Moriggl, Richard and Bergthaler, Andreas (2019). The ERBB-STAT3 axis drives Tasmanian devil facial tumor disease. Cancer Cell, 35 (1), 125-139.e9. doi: 10.1016/j.ccell.2018.11.018
2018
Journal Article
The newly-arisen devil facial tumour disease 2 (DFT2) reveals a mechanism for the emergence of a contagious cancer
Caldwell, Alison, Coleby, Rachel, Tovar, Cesar, Stammnitz, Maximilian R., Mi Kwon, Young, Owen, Rachel S., Tringides, Marios, Murchison, Elizabeth P., Skjødt, Karsten, Thomas, Gareth J., Kaufman, Jim, Elliott, Tim, Woods, Gregory M. and Siddle, Hannah V. T. (2018). The newly-arisen devil facial tumour disease 2 (DFT2) reveals a mechanism for the emergence of a contagious cancer. eLife, 7 e35314, 1-18. doi: 10.7554/eLife.35314
2018
Journal Article
The Origins and Vulnerabilities of Two Transmissible Cancers in Tasmanian Devils
Stammnitz, Maximilian R., Coorens, Tim H.H., Gori, Kevin C., Hayes, Dane, Fu, Beiyuan, Wang, Jinhong, Martin-Herranz, Daniel E., Alexandrov, Ludmil B., Baez-Ortega, Adrian, Barthorpe, Syd, Beck, Alexandra, Giordano, Francesca, Knowles, Graeme W., Kwon, Young Mi, Hall, George, Price, Stacey, Pye, Ruth J., Tubio, Jose M.C., Siddle, Hannah V. T., Sohal, Sukhwinder Singh, Woods, Gregory M., McDermott, Ultan, Yang, Fengtang, Garnett, Mathew J., Ning, Zemin and Murchison, Elizabeth P. (2018). The Origins and Vulnerabilities of Two Transmissible Cancers in Tasmanian Devils. Cancer Cell, 33 (4), 607-619.e15. doi: 10.1016/j.ccell.2018.03.013
2017
Journal Article
The role of MHC genes in contagious cancer: the story of Tasmanian devils
Caldwell, Alison and Siddle, Hannah V. (2017). The role of MHC genes in contagious cancer: the story of Tasmanian devils. Immunogenetics, 69 (8-9), 537-545. doi: 10.1007/s00251-017-0991-9
Funding
Current funding
Supervision
Availability
- Dr Hannah Siddle is:
- Available for supervision
Before you email them, read our advice on how to contact a supervisor.
Supervision history
Current supervision
-
Doctor Philosophy
Detection of pathogens causing venereal disease in Northern beef cattle using long read sequencing.
Associate Advisor
Other advisors: Dr Gry Boe-Hansen, Professor Ala Tabor
-
Doctor Philosophy
On farm genomics for selection and management in aquaculture: tank-side genotyping
Associate Advisor
Other advisors: Professor Ben Hayes
-
Doctor Philosophy
Bovine Immunity from Novel Protozoan Vaccines
Associate Advisor
Other advisors: Dr Gry Boe-Hansen, Dr Loan Nguyen, Professor Ala Tabor
-
Doctor Philosophy
Campylobacter fetus genomics and host biomarkers for bovine genital campylobacteriosis immunity.
Associate Advisor
Other advisors: Dr Gry Boe-Hansen, Dr Mehrnush Forutan, Professor Ala Tabor
Media
Enquiries
For media enquiries about Dr Hannah Siddle's areas of expertise, story ideas and help finding experts, contact our Media team: