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2024

Journal Article

Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation

Ong, Chian Teng, Blackall, Patrick. J., Boe-Hansen, Gry B., deWet, Sharon, Hayes, Ben J., Indjein, Lea, Korolik, Victoria, Minchin, Catherine, Nguyen, Loan To, Nordin, Yusralimuna, Siddle, Hannah, Turni, Conny, Venus, Bronwyn, Westman, Mark E., Zhang, Zhetao and Tabor, Ala E. (2024). Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation. Frontiers in Microbiology, 15 1452564. doi: 10.3389/fmicb.2024.1452564

Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation

2024

Journal Article

A systematic review of predictive, diagnostic, and prognostic biomarkers for detecting reproductive diseases in cattle using traditional and omics approaches

Juli, Mst Sogra Banu, Boe-Hansen, Gry B., Raza, Ali, Forutan, Mehrnush, Ong, Chian Teng, Siddle, Hannah V. and Tabor, Ala E. (2024). A systematic review of predictive, diagnostic, and prognostic biomarkers for detecting reproductive diseases in cattle using traditional and omics approaches. Journal of Reproductive Immunology, 165 104315, 104315. doi: 10.1016/j.jri.2024.104315

A systematic review of predictive, diagnostic, and prognostic biomarkers for detecting reproductive diseases in cattle using traditional and omics approaches

2024

Journal Article

Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis

Ong, Chian Teng, Mody, Karishma T., Cavallaro, Antonino S., Yan, Yakun, Nguyen, Loan T., Shao, Renfu, Mitter, Neena, Mahony, Timothy J. and Ross, Elizabeth M. (2024). Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis. International Journal of Molecular Sciences, 25 (14) 7824, 1-15. doi: 10.3390/ijms25147824

Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis

2023

Conference Publication

New diagnostic tools for bovine vibriosis

Tabor, Ala, Siddle, Hannah, Juli, Sogra Banu, Raza, Ali, Ong, Chian Teng, McCosker, Kieren, Hayes, Ben and Boe-Hansen, Gry (2023). New diagnostic tools for bovine vibriosis. Northern Beef Research Update Conference, Darwin, NT Australia, 22-25 August 2023.

New diagnostic tools for bovine vibriosis

2022

Journal Article

Adaptive sampling during sequencing reveals the origins of the bovine reproductive tract microbiome across reproductive stages and sexes

Ong, Chian Teng, Ross, Elizabeth M., Boe-Hansen, Gry, Turni, Conny, Hayes, Ben J., Fordyce, Geoffry and Tabor, Ala E. (2022). Adaptive sampling during sequencing reveals the origins of the bovine reproductive tract microbiome across reproductive stages and sexes. Scientific reports, 12 (1) 15075, 1-12. doi: 10.1038/s41598-022-19022-w

Adaptive sampling during sequencing reveals the origins of the bovine reproductive tract microbiome across reproductive stages and sexes

2022

Journal Article

Role of Staphylococcus agnetis and Staphylococcus hyicus in the pathogenesis of buffalo fly skin lesions in cattle

Naseem, Muhammad Noman, Turni, Conny, Gilbert, Rosalind, Raza, Ali, Allavena, Rachel, McGowan, Michael, Constantinoiu, Constantin, Ong, Chian Teng, Tabor, Ala E. and James, Peter (2022). Role of Staphylococcus agnetis and Staphylococcus hyicus in the pathogenesis of buffalo fly skin lesions in cattle. Microbiology Spectrum, 10 (4) e0087322, 1-18. doi: 10.1128/spectrum.00873-22

Role of Staphylococcus agnetis and Staphylococcus hyicus in the pathogenesis of buffalo fly skin lesions in cattle

2022

Other Outputs

Pathogenomics of bovine infertility in northern Australia

Ong, Chian Teng (2022). Pathogenomics of bovine infertility in northern Australia. PhD Thesis, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland. doi: 10.14264/4b69697

Pathogenomics of bovine infertility in northern Australia

2022

Journal Article

Evaluation of host depletion and extraction methods for shotgun metagenomic analysis of bovine vaginal samples

Ong, Chian Teng, Boe-Hansen, Gry, Ross, Elizabeth M., Blackall, Patrick J., Turni, Conny, Hayes, Ben J. and Tabor, Ala E. (2022). Evaluation of host depletion and extraction methods for shotgun metagenomic analysis of bovine vaginal samples. Microbiology Spectrum, 10 (2), e0041221. doi: 10.1128/spectrum.00412-21

Evaluation of host depletion and extraction methods for shotgun metagenomic analysis of bovine vaginal samples

2022

Journal Article

Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing

Ong, Chian Teng, Ross, Elizabeth M., Boe-Hansen, Gry B., Turni, Conny, Hayes, Ben J. and Tabor, Ala E. (2022). Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing. Journal of Animal Science, 100 (1) skab344. doi: 10.1093/jas/skab344

Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing

2021

Journal Article

Interrogating the bovine reproductive tract metagenomes using culture-independent approaches: a systematic review

Ong, Chian Teng, Turni, Conny, Blackall, Patrick J., Boe-Hansen, Gry, Hayes, Ben J. and Tabor, Ala E. (2021). Interrogating the bovine reproductive tract metagenomes using culture-independent approaches: a systematic review. Animal Microbiome, 3 (1) 41, 41. doi: 10.1186/s42523-021-00106-3

Interrogating the bovine reproductive tract metagenomes using culture-independent approaches: a systematic review

2018

Journal Article

Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus

Rodriguez-Valle, Manuel, Moolhuijzen, Paula, Barrero, Roberto A., Ong, Chian Teng, Busch, Greta, Karbanowicz, Thomas, Booth, Mitchell, Clark, Richard, Koehbach, Johannes, Ijaz, Hina, Broady, Kevin, Agnew, Kim, Knowles, Aleta G., Bellgard, Matthew I. and Tabor, Ala E. (2018). Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus. International Journal for Parasitology, 48 (1), 71-82. doi: 10.1016/j.ijpara.2017.07.007

Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus

2014

Conference Publication

A glance into sialome of Australian paralysis tick - Ixodes holocyclus

Ong, Chian Teng, Rodriguez-Valle, Manuel and Lew-Tabor, Ala (2014). A glance into sialome of Australian paralysis tick - Ixodes holocyclus. 2nd Annual International Conference on Advances in Veterinary Science Research (VETSCI 2014), Singapore, Singapore, 24-25 November 2014. Global Science & Technology Forum (GSTF). doi: 10.5176/2382-5685_vetsci14.40

A glance into sialome of Australian paralysis tick - Ixodes holocyclus