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2023 Journal Article Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneumThirugnanasambandam, Prathima Perumal, Singode, Avinash, Thalambedu, Lakshmi Pathy, Athiappan, Selvi, Krishnasamy, Mohanraj, Purakkal, Sobhakumari Valiya, Govind, Hemaprabha, Furtado, Agnelo and Henry, Robert (2023). Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum. Frontiers in Plant Science, 14 1199748, 1-15. doi: 10.3389/fpls.2023.1199748 |
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2023 Journal Article Editorial: Plant genetic and genomic resources for sustained crop improvementRangan, Parimalan, Henry, Robert, Wambugu, Peterson and Periyannan, Sambasivam (2023). Editorial: Plant genetic and genomic resources for sustained crop improvement. Frontiers in Plant Science, 14 1266698, 1-3. doi: 10.3389/fpls.2023.1266698 |
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2023 Journal Article Moderate reduction in nitrogen fertilizer results in improved rice quality by affecting starch properties without causing yield lossLi, Yimeng, Liang, Chao, Liu, Junfeng, Zhou, Chanchan, Wu, Zhouzhou, Guo, Shimeng, Liu, Jiaxin, A, Na, Wang, Shu, Xin, Guang and Henry, Robert J. (2023). Moderate reduction in nitrogen fertilizer results in improved rice quality by affecting starch properties without causing yield loss. Foods, 12 (13) 2601, 1-22. doi: 10.3390/foods12132601 |
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2023 Journal Article Editorial: genomics and phenomics of crop wild relatives (CWRs) for crop improvementRangan, Parimalan, Pradheep, Kanakasabapathi, Archak, Sunil, Smýkal, Petr and Henry, Robert (2023). Editorial: genomics and phenomics of crop wild relatives (CWRs) for crop improvement. Frontiers in Plant Science, 14 1221601, 1-2. doi: 10.3389/fpls.2023.1221601 |
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2023 Journal Article Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genesNakandala, Upuli, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Furtado, Agnelo, Mason, Patrick, Constantin, Lena and Henry, Robert J. (2023). Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes. Horticulture Research, 10 (05) uhad058, 1-14. doi: 10.1093/hr/uhad058 |
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2023 Journal Article Analysis of domestication loci in wild rice populationsHasan, Sharmin, Furtado, Agnelo and Henry, Robert (2023). Analysis of domestication loci in wild rice populations. Plants, 12 (3) 489, 1-14. doi: 10.3390/plants12030489 |
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2023 Journal Article Breaking the tight genetic linkage between the a1 and sh2 genes led to the development of anthocyanin-rich purple-pericarp super-sweetcornAnirban, Apurba, Hayward, Alice, Hong, Hung T., Masouleh, Ardashir Kharabian, Henry, Robert J. and O'Hare, Tim J. (2023). Breaking the tight genetic linkage between the a1 and sh2 genes led to the development of anthocyanin-rich purple-pericarp super-sweetcorn. Scientific Reports, 13 (1) 1050, 1-13. doi: 10.1038/s41598-023-28083-4 |
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2023 Journal Article Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids)Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2023). Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids). BMC Genomics, 24 (1) 18, 1-18. doi: 10.1186/s12864-023-09124-8 |
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2023 Journal Article Sequence variations associated with novel purple-pericarp super-sweetcorn compared to its purple-pericarp maize and white super-sweetcorn parentsAnirban, Apurba, Masouleh, Ardashir Kharabian, Henry, Robert J. and O’Hare, Tim J. (2023). Sequence variations associated with novel purple-pericarp super-sweetcorn compared to its purple-pericarp maize and white super-sweetcorn parents. Molecular Genetics and Genomics, 298 (6), 1395-1405. doi: 10.1007/s00438-023-02060-y |
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2023 Journal Article Phylogenetic relationships among Australian native citrus species based upon complete chloroplast genomes and single copy nuclear genesNakandala, Upuli, Furtado, Agnelo, Smith, Malcolm W., Williams, Darren C. and Henry, Robert J. (2023). Phylogenetic relationships among Australian native citrus species based upon complete chloroplast genomes and single copy nuclear genes. Tropical Plants, 2 (1) 21, 1-8. doi: 10.48130/tp-2023-0021 |
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2023 Journal Article Genomic characterization supporting the development of new food and crop options from the Australian floraHenry, Robert J. (2023). Genomic characterization supporting the development of new food and crop options from the Australian flora. Sustainable Food Technology, 1 (3), 337-347. doi: 10.1039/d3fb00001j |
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2022 Journal Article Variant analysis of grain size related genes in the genus SorghumAnanda, Galaihalage K. S., Norton, Sally L., Barnes, Eve, Furtado, Agnelo, Møller, Birger Lindberg, Gleadow, Roslyn and Henry, Robert J. (2022). Variant analysis of grain size related genes in the genus Sorghum. Genetic Resources and Crop Evolution, 70 (5), 1377-1394. doi: 10.1007/s10722-022-01508-1 |
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2022 Journal Article Gene expression in the developing seed of wild and domesticated riceHasan, Sharmin, Furtado, Agnelo and Henry, Robert (2022). Gene expression in the developing seed of wild and domesticated rice. International Journal of Molecular Sciences, 23 (21) 13351, 1-21. doi: 10.3390/ijms232113351 |
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2022 Journal Article Balancing incentives for innovation in new plant varietiesMacDonald, Hamish and Henry, Robert J. (2022). Balancing incentives for innovation in new plant varieties. Nature Plants, 8 (11), 1206-1208. doi: 10.1038/s41477-022-01246-3 |
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2022 Journal Article Transcriptome and metabolome integration in sugarcane through culm developmentPerlo, Virginie, Furtado, Agnelo, Botha, Frederik C., Margarido, Gabriel R. A., Hodgson‐Kratky, Katrina, Choudhary, Hemant, Gladden, John, Simmons, Blake and Henry, Robert J. (2022). Transcriptome and metabolome integration in sugarcane through culm development. Food and Energy Security, 11 (4) e421, 1-16. doi: 10.1002/fes3.421 |
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2022 Journal Article A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genesNath, Onkar, Fletcher, Stephen J., Hayward, Alice, Shaw, Lindsay M., Kharabian Masouleh, Ardashir, Furtado, Agnelo, Henry, Robert J. and Mitter, Neena (2022). A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes. Horticulture Research, 9 uhac157, 1-10. doi: 10.1093/hr/uhac157 |
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2022 Journal Article Progress in plant genome sequencingHenry, Robert J. (2022). Progress in plant genome sequencing. Applied Biosciences, 1 (2), 113-128. doi: 10.3390/applbiosci1020008 |
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2022 Journal Article Systems seed biology to understand and manipulate rice grain quality and nutritionBadoni, Saurabh, Parween, Sabiha, Henry, Robert J. and Sreenivasulu, Nese (2022). Systems seed biology to understand and manipulate rice grain quality and nutrition. Critical Reviews in Biotechnology, 43 (5), 716-733. doi: 10.1080/07388551.2022.2058460 |
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2022 Journal Article The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcriptsHasan, Sharmin, Huang, Lichun, Liu, Qiaoquan, Perlo, Virginie, O'Keeffe, Angela, Margarido, Gabriel Rodrigues Alves, Furtado, Agnelo and Henry, Robert J (2022). The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcripts. Rice, 15 (1) 29, 29. doi: 10.1186/s12284-022-00577-1 |
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2022 Journal Article Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the PoaceaeRangan, Parimalan, Wankhede, Dhammaprakash P., Subramani, Rajkumar, Chinnusamy, Viswanathan, Malik, Surendra K., Baig, Mirza Jaynul, Singh, Kuldeep and Henry, Robert (2022). Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the Poaceae. Photosynthesis Research, 153 (3), 125-134. doi: 10.1007/s11120-022-00926-7 |
