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2026 Journal Article The reference genome sequence of the scarlet follicle, Sterculia lanceolata, reveals a paleo-polyploidization and its impact on fruit quality and fruit dehiscenceHu, Youtao, Zhang, Youpeng, Zhang, Hongbin, Zhang, Jiahao, Guo, Guilian, Yang, Kejing, Shao, Bing-Yan, Xue, Jia-Yu, Henry, Robert, Wang, Wenquan and Chen, Fei (2026). The reference genome sequence of the scarlet follicle, Sterculia lanceolata, reveals a paleo-polyploidization and its impact on fruit quality and fruit dehiscence. Functional and Integrative Genomics, 26 (1) 46. doi: 10.1007/s10142-026-01829-9 |
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2026 Journal Article Biobutanol production from sugarcane bagasse via deep eutectic solvent pretreatment: Integrated process optimisation, techno-economic and life cycle assessmentJoshikumar, Neethu, Noor, Aisha, Pant, Kamal Kishore, Botha, Frederik and Henry, Robert J. (2026). Biobutanol production from sugarcane bagasse via deep eutectic solvent pretreatment: Integrated process optimisation, techno-economic and life cycle assessment. Chemical Engineering Research and Design, 228, 368-381. doi: 10.1016/j.cherd.2026.03.005 |
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2026 Journal Article Chromosome‐Scale Haplotype Genome Assemblies for the Australian Mango ‘Kensington Pride’ and a Wild Relative, <i>Mangifera laurina</i> , Provide Insights Into Anthracnose‐Resistance and Volatile Compound Biosynthesis GenesWijesundara, Upendra Kumari, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Dillon, Natalie L., Smyth, Heather E. and Henry, Robert J. (2026). Chromosome‐Scale Haplotype Genome Assemblies for the Australian Mango ‘Kensington Pride’ and a Wild Relative, Mangifera laurina , Provide Insights Into Anthracnose‐Resistance and Volatile Compound Biosynthesis Genes. Plant Biotechnology Journal pbi.70556. doi: 10.1111/pbi.70556 |
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2026 Journal Article Identification of a QTL conferring resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Calcutta 4 (Musa acuminata ssp. burmannica)Chen, Andrew, Martin, Guillaume, Viljoen, Altus, Sun, Jiaman, Rames, Emily, Yahiaoui, Nabila, D'hont, Angelique, Ferguson, Brett J., Swennen, Rony, Henry, Robert J., Varshney, Rajeev K. and Aitken, Elizabeth A B. (2026). Identification of a QTL conferring resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Calcutta 4 (Musa acuminata ssp. burmannica). Horticulture Research uhag001. doi: 10.1093/hr/uhag001 |
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2026 Journal Article Evaluation of mango (Mangifera indica L.) germplasm for phenotypic diversity and breeding potential in PakistanAnsari, Wajiha Zaka, Mukhtar, Hannan, Ali, Asjad, Arif, Muhammad, Iqbal, Javed and Henry, Robert J. (2026). Evaluation of mango (Mangifera indica L.) germplasm for phenotypic diversity and breeding potential in Pakistan. Scientific Reports, 16 (1) 3693, 1-25. doi: 10.1038/s41598-025-33793-y |
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2026 Journal Article Integrating Genomic and Climate Data to Design Representative Seed Production Areas: A Pragmatic Workflow for Climate‐Adjusted ProvenancingDimon, Richard J., Bragg, Jason, Fahey, Patrick, van der Merwe, Marlien, Wilson, Peter D., Henry, Robert and Rossetto, Maurizio (2026). Integrating Genomic and Climate Data to Design Representative Seed Production Areas: A Pragmatic Workflow for Climate‐Adjusted Provenancing. Ecology and Evolution, 16 (1) e72658, e72658. doi: 10.1002/ece3.72658 |
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2026 Book Chapter Designing of guide RNA for CRISPR gene editing: a web-based foundational approachOkemo, Pauline and Henry, Robert (2026). Designing of guide RNA for CRISPR gene editing: a web-based foundational approach. Harnessing genomic tools for crop improvement: a software user manual for transforming geneticists to genomicists. (pp. 373-392) London, United Kingdom: Academic Press. doi: 10.1016/b978-0-443-29281-1.00012-5 |
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2026 Journal Article Contraction–Expansion Dynamics Shape Refugia and Recolonisation Processes in the Gondwana Rainforests of Australia World Heritage AreaDimon, Richard J., Yap, Jia‐Yee S., Kooyman, Robert M., Wilson, Peter D., Henry, Robert J. and Rossetto, Maurizio (2026). Contraction–Expansion Dynamics Shape Refugia and Recolonisation Processes in the Gondwana Rainforests of Australia World Heritage Area. Applied Vegetation Science, 29 (1) e70059, 1. doi: 10.1111/avsc.70059 |
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2025 Journal Article SiFTL and SiHd3a are positive regulators of flowering time in sesame (Sesamum indicum L.)Zhao, Fengli, Du, Zhenwei, Cui, Chengqi, Wu, Ke, Jiang, Xiaolin, Wang, Jingjing, Zhang, Ruping, Fan, Yadong, Henry, Robert J., Liu, Yanyang, Mei, Hongxian and Zhang, Haiyang (2025). SiFTL and SiHd3a are positive regulators of flowering time in sesame (Sesamum indicum L.). Frontiers in Plant Science, 16 1716212. doi: 10.3389/fpls.2025.1716212 |
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2025 Journal Article Spatial transcriptomics of developing wheat seed reveals concentric gene expression zones and subgenome biased expression of key genesMillsteed, Tori, Kainer, David, Sullivan, Robert, Sun, Xiaohuan, Li, Ka Leung, Mao, Likai, Macdonald, Arlie and Henry, Robert J. (2025). Spatial transcriptomics of developing wheat seed reveals concentric gene expression zones and subgenome biased expression of key genes. Plant Biotechnology Journal, 23 (12), 5934-5949. doi: 10.1111/pbi.70351 |
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2025 Journal Article The Oryza australiensis genome reveals potential as a source of genes for rice improvementMorrison, Sabrina, Masouleh, Ardashir K., Constantin, Lena, Panaud, Olivier, Wing, Rod A. and Henry, Robert J. (2025). The Oryza australiensis genome reveals potential as a source of genes for rice improvement. Scientific Reports, 15 (1) 27826, 1-19. doi: 10.1038/s41598-025-13310-x |
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2025 Other Outputs Data associated with the publication: Integrating Genomic and Climate Data to Design Representative Seed Production Areas: A Pragmatic Workflow for Climate‐Adjusted ProvenancingDimon, Richard J., Bragg, Jason, Fahey, Patrick, van der Merwe, Marlien, Wilson, Peter D., Henry, Robert and Rossetto, Maurizio (2025). Data associated with the publication: Integrating Genomic and Climate Data to Design Representative Seed Production Areas: A Pragmatic Workflow for Climate‐Adjusted Provenancing. The University of Queensland. (Dataset) doi: 10.48610/1b70ddb |
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2025 Journal Article A whole-genome sequencing-based SNP protocol for accurate plant variety identification: Application in blueberryFurtado, Agnelo, Gunther, Tom and Henry, Robert J. (2025). A whole-genome sequencing-based SNP protocol for accurate plant variety identification: Application in blueberry. Applied Biosciences, 4 (4) 51, 1-34. doi: 10.3390/applbiosci4040051 |
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2025 Journal Article Engineering plants to replace fossil carbonHenry, Robert J. (2025). Engineering plants to replace fossil carbon. Agriculture Communications, 3 (4) 100116, 100116-4. doi: 10.1016/j.agrcom.2025.100116 |
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2025 Journal Article Genetic relationships in the gene pool of domesticated Macadamia based upon chloroplast and nuclear genome sequencingManatunga, Sachini Lakmini, Furtado, Agnelo, Topp, Bruce, Alam, Mobashwer, Mason, Patrick J., Kharabian-Masouleh, Ardashir and Henry, Robert J. (2025). Genetic relationships in the gene pool of domesticated Macadamia based upon chloroplast and nuclear genome sequencing. Tree Genetics & Genomes, 21 (6) 32, 1-11. doi: 10.1007/s11295-025-01717-6 |
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2025 Journal Article Re-calibration of flow cytometry standards for plant genome size estimationSoni, Abhishek and Henry, Robert J. (2025). Re-calibration of flow cytometry standards for plant genome size estimation. Frontiers in Plant Science, 16 1548766, 1-12. doi: 10.3389/fpls.2025.1548766 |
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2025 Journal Article Fine-tuning EMS treatments to produce large sorghum mutant populations for FIND-ITMason, Patrick J., Blaakmeer, Anko, Furtado, Agnelo, Stuart, Peter, Nomula, Rajesh, Bjarnholt, Nanna, Pedas, Pai Rosager, Knudsen, Søren, Møller, Birger Lindberg, Skadhauge, Birgitte and Henry, Robert J. (2025). Fine-tuning EMS treatments to produce large sorghum mutant populations for FIND-IT. Discover Agriculture, 3 (1) 181, 1-17. doi: 10.1007/s44279-025-00368-4 |
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2025 Journal Article Assessing lignocellulose quality across growth stages in diverse sugarcane genotypesBotha, Frederik C. and Henry, Robert J. (2025). Assessing lignocellulose quality across growth stages in diverse sugarcane genotypes. Sustainability, 17 (18) 8481, 1-19. doi: 10.3390/su17188481 |
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2025 Journal Article Spatial omics for accelerating plant research and crop improvementBarmukh, Rutwik, Garg, Vanika, Liu, Hao, Chitikineni, Annapurna, Xin, Liu, Henry, Robert and Varshney, Rajeev K. (2025). Spatial omics for accelerating plant research and crop improvement. Trends in Biotechnology, 43 (8), 1904-1920. doi: 10.1016/j.tibtech.2025.03.007 |
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2025 Journal Article Harnessing novel genomic resources and emerging breeding tools to fast-track genetic improvement in papayaCopeland, Rhys Glen Richard, Bar, Ido, Prasad, Shri Hari, Mir, Reyazul Rouf, Garg, Vanika, Henry, Robert, Ming, Ray and Varshney, Rajeev Kumar (2025). Harnessing novel genomic resources and emerging breeding tools to fast-track genetic improvement in papaya. Horticultural Plant Journal. doi: 10.1016/j.hpj.2025.06.001 |
