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2025 Journal Article Spatial omics for accelerating plant research and crop improvementBarmukh, Rutwik, Garg, Vanika, Liu, Hao, Chitikineni, Annapurna, Xin, Liu, Henry, Robert and Varshney, Rajeev K. (2025). Spatial omics for accelerating plant research and crop improvement. Trends in Biotechnology, 43 (8), 1904-1920. doi: 10.1016/j.tibtech.2025.03.007 |
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2025 Journal Article Harnessing novel genomic resources and emerging breeding tools to fast-track genetic improvement in papayaCopeland, Rhys Glen Richard, Bar, Ido, Prasad, Shri Hari, Mir, Reyazul Rouf, Garg, Vanika, Henry, Robert, Ming, Ray and Varshney, Rajeev Kumar (2025). Harnessing novel genomic resources and emerging breeding tools to fast-track genetic improvement in papaya. Horticultural Plant Journal. doi: 10.1016/j.hpj.2025.06.001 |
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2025 Journal Article Integrating multiomics and modern breeding tools for accelerating genetic improvement in AnnonasPrasad, Shri Hari, Bignell, Grant, Copeland, Rhys G. R., Garg, Vanika, Chitikineni, Annapurna, Henry, Robert J., Dillon, Natalie, Mir, Reyazul Rouf and Varshney, Rajeev K. (2025). Integrating multiomics and modern breeding tools for accelerating genetic improvement in Annonas. Functional and Integrative Genomics, 25 (1) 155, 1-24. doi: 10.1007/s10142-025-01653-7 |
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2025 Journal Article Editorial: Genomics-driven advances in crop productivity and stress resilienceRangan, Parimalan, Henry, Robert and Gaikwad, Ambika Baldev (2025). Editorial: Genomics-driven advances in crop productivity and stress resilience. Frontiers in Plant Science, 16 1645714, 1645714-16. doi: 10.3389/fpls.2025.1645714 |
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2025 Journal Article Characterizing the structural variations in the genome of the mandarin variety, IrM2, induced by gamma irradiationNakandala, Upuli, Furtado, Agnelo, Kharabian Masouleh, Ardashir, Smith, Malcolm W., Mason, Patrick and Henry, Robert J. (2025). Characterizing the structural variations in the genome of the mandarin variety, IrM2, induced by gamma irradiation. Plant Biotechnology Journal, 23 (9), 3814-3823. doi: 10.1111/pbi.70205 |
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2025 Journal Article A flow cytometry protocol for measurement of plant genome size using frozen materialSoni, Abhishek, Constantin, Lena, Furtado, Agnelo and Henry, Robert J. (2025). A flow cytometry protocol for measurement of plant genome size using frozen material. Applied Biosciences, 4 (2) 28, 28. doi: 10.3390/applbiosci4020028 |
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2025 Journal Article Genotype × environment effects in three wild relatives of sorghum from AustraliaMyrans, Harry, Chithrarachchige, Dinithi, Henry, Robert J., Norton, Sally and Gleadow, Roslyn M. (2025). Genotype × environment effects in three wild relatives of sorghum from Australia. Plant-Environment Interactions, 6 (3) e70065, 1-13. doi: 10.1002/pei3.70065 |
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2025 Journal Article Unique starch biosynthesis pathways in wild rice revealed by multi‐omics analysesNurmansyah,, Furtado, Agnelo, Okemo, Pauline and Henry, Robert J. (2025). Unique starch biosynthesis pathways in wild rice revealed by multi‐omics analyses. Plant Biotechnology Journal, 23 (6), 2429-2445. doi: 10.1111/pbi.70021 |
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2025 Journal Article Integrated multi-omics analysis unravels the floral scent characteristics and regulation in "Hutou" multi-petal jasmineFang, Jingping, Zhou, Linwei, Chen, Qinchang, Wang, Jinbin, Zhuang, Ying, Lin, Shaoqing, Yan, Hansong, Zhao, Kai, Zhang, Jisen and Henry, Robert J. (2025). Integrated multi-omics analysis unravels the floral scent characteristics and regulation in "Hutou" multi-petal jasmine. Communications Biology, 8 (1) 256, 1-20. doi: 10.1038/s42003-025-07685-w |
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2025 Journal Article Citrus genomes: Past, present and futureNakandala, Upuli, Furtado, Agnelo and Henry, Robert J (2025). Citrus genomes: Past, present and future. Horticulture Research, 12 (5) uhaf033, uhaf033. doi: 10.1093/hr/uhaf033 |
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2025 Journal Article The genomes of the most diverse AA genome rice species provide a resource for rice improvement and studies of rice evolution and domesticationAbdullah, Muhammad, Furtado, Agnelo, Kharabian Masouleh, Ardashir, Okemo, Pauline and Henry, Robert (2025). The genomes of the most diverse AA genome rice species provide a resource for rice improvement and studies of rice evolution and domestication. BMC Genomics, 26 (1) 54, 1-15. doi: 10.1186/s12864-025-11246-0 |
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2025 Book Chapter Advances in genomics for improving coffee beverage qualityCheng, Bing, Henry, Robert and He, Hongju (2025). Advances in genomics for improving coffee beverage quality. Advances in botanical research: coffee - a glimpse into the future. (pp. 485-524) edited by Fábio M. DaMatta and José C. Ramalho. London, U.K.: Academic Press. doi: 10.1016/bs.abr.2024.04.007 |
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2025 Journal Article Centromeres are hotspots for chromosomal inversions and breeding traits in mangoWilkinson, Melanie J., McLay, Kathleen, Kainer, David, Elphinstone, Cassandra, Dillon, Natalie L., Webb, Matthew, Wijesundara, Upendra K., Ali, Asjad, Bally, Ian S. E., Munyengwa, Norman, Furtado, Agnelo, Henry, Robert J., Hardner, Craig M. and Ortiz‐Barrientos, Daniel (2025). Centromeres are hotspots for chromosomal inversions and breeding traits in mango. New Phytologist, 245 (2), 899-913. doi: 10.1111/nph.20252 |
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2025 Journal Article International research initiative on genomics-guided sugarcane breedingZhang, Xingtan, Wang, Jungang, Noor-ul-Áin, Que, Youxiong, Zhang, Jisen, Abid, Javeria, Zhao, Peifang, Zhang, Yuebin, Lin, Jishan, Chen, Li-yu, Bao, Yixue, Herry, Robert, Tangphatsornruang, Sithichoke, Wang, Qinnan, Huang, Dongliang, Ye, Jian, Zhang, Muqing, Luo, Ming, Butterfield, Mike, Wang, Ren and Ming, Ray (2025). International research initiative on genomics-guided sugarcane breeding. Molecular Plant, 18 (2), 171-174. doi: 10.1016/j.molp.2025.01.003 |
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2025 Journal Article The First International Symposium of the World Wild Rice Wiring: Conservation and Utilization of Global Wild Rice Germplasm Resources through International CooperationRatnasekera, Disna, Fan, Jiayu, Henry, Robert J., Song, Beng-Kah, Wambugu, Peterson, Pusadee, Tonapha, Aung, Ohn Mar, Vilayheuang, Koukham, Zheng, Xiaoming and Qian, Qian (2025). The First International Symposium of the World Wild Rice Wiring: Conservation and Utilization of Global Wild Rice Germplasm Resources through International Cooperation. Molecular Plant, 18 (2), 167-170. doi: 10.1016/j.molp.2025.01.002 |
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2024 Other Outputs Data Availability associated for the paper "Contraction-expansion dynamics and interregional admixture shape refugia and recolonisation processes in the Gondwana Rainforests of Australia World Heritage Area"Dimon, RJ, Yap, JS, Kooyman, RM, Wilson, PD, Henry, RJ and Rossetto, M (2024). Data Availability associated for the paper "Contraction-expansion dynamics and interregional admixture shape refugia and recolonisation processes in the Gondwana Rainforests of Australia World Heritage Area". The University of Queensland. (Dataset) doi: 10.48610/611041e |
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2024 Journal Article PhyloForge: unifying micro‐ and macroevolution with comprehensive genomic signalsWang, Ya, Dong, Wei, Liang, Yufan, Lin, Weiwei, Chen, Junhao, Henry, Robert and Chen, Fei (2024). PhyloForge: unifying micro‐ and macroevolution with comprehensive genomic signals. Molecular Ecology Resources, 25 (3) e14050, e14050. doi: 10.1111/1755-0998.14050 |
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2024 Journal Article Wild rice: unlocking the future of rice breedingZheng, Xiaoming, Peng, Youlin, Qiao, Jiyue, Henry, Robert and Qian, Qian (2024). Wild rice: unlocking the future of rice breeding. Plant Biotechnology Journal, 22 (11), 3218-3226. doi: 10.1111/pbi.14443 |
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2024 Journal Article Genome sequences to support conservation and breeding of MacadamiaSharma, Priyanka, Masouleh, Ardashir Kharabian, Constantin, Lena, Topp, Bruce, Furtado, Agnelo and Henry, Robert J. (2024). Genome sequences to support conservation and breeding of Macadamia. Tropical Plants, 3 (1) e035, 1-11. doi: 10.48130/tp-0024-0029 |
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2024 Journal Article Analysis of phylogenetic relationships in Macadamia shows evidence of extensive reticulate evolutionManatunga, Sachini Lakmini, Furtado, Agnelo, Topp, Bruce, Alam, Mobashwer, Mason, Patrick J., Kharabian-Masouleh, Ardashir and Henry, Robert J. (2024). Analysis of phylogenetic relationships in Macadamia shows evidence of extensive reticulate evolution. Frontiers in Plant Science, 15 1394244, 1394244. doi: 10.3389/fpls.2024.1394244 |
