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2024 Journal Article Harnessing the Power of an Extensive EMS‐Induced Sorghum Population for Rapid Crop ImprovementMason, Patrick John, Blaakmeer, Anko, Furtado, Agnelo, Stuart, Peter Norman, Nomula, Rajesh, Bjarnholt, Nanna, Sørensen, Mette, Koleva, Donka Teneva, Pedas, Pai Rosager, Knudsen, Søren, Møller, Birger Lindberg, Skadhauge, Birgitte and Henry, Robert James (2024). Harnessing the Power of an Extensive EMS‐Induced Sorghum Population for Rapid Crop Improvement. Physiologia Plantarum, 176 (4) e14449, 1-9. doi: 10.1111/ppl.14449 |
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2024 Journal Article A chromosome‐level genome of mango exclusively from long‐read sequence dataWijesundara, Upendra Kumari, Masouleh, Ardashir Kharabian, Furtado, Agnelo, Dillon, Natalie L. and Henry, Robert J. (2024). A chromosome‐level genome of mango exclusively from long‐read sequence data. The Plant Genome, 17 (2) e20441, 1-13. doi: 10.1002/tpg2.20441 |
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2024 Journal Article Advancements in balancing glucosinolate production in plants to deliver effective defense and promote human healthCheng, Bing, Ran, Rui, Qu, Yanyan, Verkerk, Ruud, Henry, Robert, Dekker, Matthijs and He, Hongju (2024). Advancements in balancing glucosinolate production in plants to deliver effective defense and promote human health. Agriculture Communications, 2 (2) 100040, 2. doi: 10.1016/j.agrcom.2024.100040 |
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2024 Journal Article The effect of chemical-induced mutagenesis in indica rice variety IR50404 for blast disease caused by the Magnaporthe grisea in VietnamTran, Thien Khanh, Ha, Pham Thi Thu, Henry, Robert J. and Tuan, Truong Minh (2024). The effect of chemical-induced mutagenesis in indica rice variety IR50404 for blast disease caused by the Magnaporthe grisea in Vietnam. Indian Journal of Genetics and Plant Breeding, 84 (2), 186-192. doi: 10.31742/ISGPB.84.2.5 |
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2024 Journal Article Polyphenol content, antioxidant properties and trypsin inhibition activity of methanol seed extract and fractions of White Velvet bean from VietnamHa, D. T., Ha, P. T. T., Tuyen, P. T., Henry, R. J., Loi, T. T. and Chi, T. N. (2024). Polyphenol content, antioxidant properties and trypsin inhibition activity of methanol seed extract and fractions of White Velvet bean from Vietnam. Legume Research, 47 (5), 772-778. doi: 10.18805/LRF-783 |
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2024 Journal Article Twelve newly assembled jasmine chloroplast genomes: unveiling genomic diversity, phylogenetic relationships and evolutionary patterns among Oleaceae and Jasminum speciesXu, Xiuming, Huang, Hechen, Lin, Shaoqing, Zhou, Linwei, Yi, Yuchong, Lin, Enwen, Feng, Liqing, Zheng, Yu, Lin, Aiting, Yu, Liying, Shen, Yingjia, Henry, Robert J. and Fang, Jingping (2024). Twelve newly assembled jasmine chloroplast genomes: unveiling genomic diversity, phylogenetic relationships and evolutionary patterns among Oleaceae and Jasminum species. BMC Plant Biology, 24 (1) 331, 331. doi: 10.1186/s12870-024-04995-9 |
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2024 Journal Article The genome of Citrus australasica reveals disease resistance and other species specific genesNakandala, Upuli, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Williams, Darren C. and Henry, Robert J. (2024). The genome of Citrus australasica reveals disease resistance and other species specific genes. BMC Plant Biology, 24 (1) 260, 260. doi: 10.1186/s12870-024-04988-8 |
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2024 Journal Article Single-cell and spatial RNA sequencing reveal the spatiotemporal trajectories of fruit senescenceLi, Xin, Li, Bairu, Gu, Shaobin, Pang, Xinyue, Mason, Patrick, Yuan, Jiangfeng, Jia, Jingyu, Sun, Jiaju, Zhao, Chunyan and Henry, Robert (2024). Single-cell and spatial RNA sequencing reveal the spatiotemporal trajectories of fruit senescence. Nature Communications, 15 (1) 3108, 1-19. doi: 10.1038/s41467-024-47329-x |
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2024 Journal Article Seed abortion caused by the combination of two duplicate genes in the progeny from the cross between Oryza sativa and Oryza meridionalisToyomoto, Daiki, Shibata, Yukika, Uemura, Masato, Taura, Satoru, Sato, Tadashi, Henry, Robert, Ishikawa, Ryuji and Ichitani, Katsuyuki (2024). Seed abortion caused by the combination of two duplicate genes in the progeny from the cross between Oryza sativa and Oryza meridionalis. Breeding Science, 74 (2) 23084, 1-13. doi: 10.1270/jsbbs.23084 |
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2024 Journal Article Global Wild Rice Germplasm Resources Conservation Alliance: world wild-rice wiringZheng, Xiaoming, Ratnasekera, Disna, Fan, Jiayu, Henry, Robert J., Song, Beng-Kah, Olsen, Kenneth M., Joshi, Bal Krishna, Banaticla-Hilario, Maria Celeste N., Pusadee, Tonapha, Melaku, Adane Getachew, Estelle Loko, Yêyinou Laura, Vilayheuang, Koukham, Oppong, Gavers K., Poku, Samuel Aduse, Wambugu, Peterson W., Ge, Song, Junior, Aldo Merotto, Aung, Ohn Mar, Venuprasad, Ramaiah, Kohli, Ajay, Zhou, Wenbin and Qian, Qian (2024). Global Wild Rice Germplasm Resources Conservation Alliance: world wild-rice wiring. Molecular Plant, 17 (4), 516-518. doi: 10.1016/j.molp.2024.03.001 |
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2024 Journal Article The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivarsSalojärvi, Jarkko, Rambani, Aditi, Yu, Zhe, Guyot, Romain, Strickler, Susan, Lepelley, Maud, Wang, Cui, Rajaraman, Sitaram, Rastas, Pasi, Zheng, Chunfang, Muñoz, Daniella Santos, Meidanis, João, Paschoal, Alexandre Rossi, Bawin, Yves, Krabbenhoft, Trevor J., Wang, Zhen Qin, Fleck, Steven J., Aussel, Rudy, Bellanger, Laurence, Charpagne, Aline, Fournier, Coralie, Kassam, Mohamed, Lefebvre, Gregory, Métairon, Sylviane, Moine, Déborah, Rigoreau, Michel, Stolte, Jens, Hamon, Perla, Couturon, Emmanuel ... Descombes, Patrick (2024). The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars. Nature Genetics, 56 (4) s41588-024-01695-w, 721-731. doi: 10.1038/s41588-024-01695-w |
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2024 Journal Article A multi-cell model for the C4 photosynthetic pathway in developing wheat grains based upon tissue-specific transcriptome dataRangan, Parimalan, Furtado, Agnelo, Chinnusamy, Viswanathan and Henry, Robert (2024). A multi-cell model for the C4 photosynthetic pathway in developing wheat grains based upon tissue-specific transcriptome data. BioSystems, 238 105195, 105195. doi: 10.1016/j.biosystems.2024.105195 |
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2024 Journal Article The complex polyploid genome architecture of sugarcaneHealey, A. L., Garsmeur, O., Lovell, J. T., Shengquiang, S., Sreedasyam, A., Jenkins, J., Plott, C. B., Piperidis, N., Pompidor, N., Llaca, V., Metcalfe, C. J., Doležel, J., Cápal, P., Carlson, J. W., Hoarau, J. Y., Hervouet, C., Zini, C., Dievart, A., Lipzen, A., Williams, M., Boston, L. B., Webber, J., Keymanesh, K., Tejomurthula, S., Rajasekar, S., Suchecki, R., Furtado, A., May, G., Parakkal, P. ... D’Hont, A. (2024). The complex polyploid genome architecture of sugarcane. Nature, 628 (8009), 1-7. doi: 10.1038/s41586-024-07231-4 |
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2024 Journal Article Genome sequencing and protein modeling unraveled the 2AP biosynthesis in Bacillus cereus DB25Dhondge, Harshal V., Barvkar, Vitthal T., Dastager, Syed G., Dharne, Mahesh S., Rajput, Vinay, Pable, Anupama A., Henry, Robert J. and Nadaf, Altafhusain B. (2024). Genome sequencing and protein modeling unraveled the 2AP biosynthesis in Bacillus cereus DB25. International Journal of Food Microbiology, 413 110600, 1-11. doi: 10.1016/j.ijfoodmicro.2024.110600 |
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2024 Journal Article Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stressAl-Dossary, Othman, Furtado, Agnelo, Kharabian Masouleh, Ardashir, Alsubaie, Bader, Al-Mssallem, Ibrahim and Henry, Robert J. (2024). Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stress. Current Plant Biology, 37 100311, 100311. doi: 10.1016/j.cpb.2023.100311 |
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2024 Journal Article Crop domestication in the Asia Pacific region: a reviewOkemo, Pauline, Wijesundra, Upendra, Nakandala, Upuli, Dillon, Natalie, Chandora, Rahul, Campbell, Bradley, Smith, Millicent, Hardner, Craig, Cadorna, Charles A., Martin, Guillaume, Yahiaoui, Nabila, Garsmeur, Olivier, Pompidor, Nicolas, D’Hont, Angelique and Henry, Robert J. (2024). Crop domestication in the Asia Pacific region: a review. Agriculture Communications, 2 (1) 100032, 100032-1. doi: 10.1016/j.agrcom.2024.100032 |
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2024 Journal Article Phylogenetic relationships in the genus Mangifera based on whole chloroplast genome and nuclear genome sequencesWijesundara, Upendra Kumari, Furtado, Agnelo, Dillon, Natalie L., Masouleh, Ardashir Kharabian and Henry, Robert J (2024). Phylogenetic relationships in the genus Mangifera based on whole chloroplast genome and nuclear genome sequences. Tropical Plants, 3 (1) e034, 3. doi: 10.48130/tp-0024-0031 |
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2024 Journal Article An improved haplotype resolved genome reveals more rice genesAbdullah, Muhammad, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Okemo, Pauline and Henry, Robert (2024). An improved haplotype resolved genome reveals more rice genes. Tropical Plants, 3 (1) e009, 3. doi: 10.48130/tp-0024-0007 |
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2024 Book Chapter Application of genomics in supporting efficient conservation and utilization of plant genetic resourcesWambugu, Peterson W., Ndjiondjop, Marie-Noelle, Rangan, Parimalan and Henry, Robert J. (2024). Application of genomics in supporting efficient conservation and utilization of plant genetic resources. Sustainable utilization and conservation of plant genetic diversity. (pp. 339-361) edited by Jameel M. Al-Khayri, Shri Mohan Jain and Suprasanna Penna. Singapore: Springer. doi: 10.1007/978-981-99-5245-8_10 |
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2024 Journal Article Genome-wide association mapping of genes for anthocyanin and flavonoid contents in Vietnamese landraces of black ricePham, Cuong Hung, Do, Tuyen Duc, Nguyen, Hoa Thi Lan, Hoang, Nga Thi, Tran, Trung Duc, Vu, Mi Thi Thao, Doi, Hanh Hong, Bui, Thu-Giang Thi and Henry, Robert James (2024). Genome-wide association mapping of genes for anthocyanin and flavonoid contents in Vietnamese landraces of black rice. Euphytica, 220 (1) 11. doi: 10.1007/s10681-023-03268-0 |
