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2024 Journal Article Seed abortion caused by the combination of two duplicate genes in the progeny from the cross between Oryza sativa and Oryza meridionalisToyomoto, Daiki, Shibata, Yukika, Uemura, Masato, Taura, Satoru, Sato, Tadashi, Henry, Robert, Ishikawa, Ryuji and Ichitani, Katsuyuki (2024). Seed abortion caused by the combination of two duplicate genes in the progeny from the cross between Oryza sativa and Oryza meridionalis. Breeding Science, 74 (2) 23084, 1-13. doi: 10.1270/jsbbs.23084 |
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2024 Journal Article A multi-cell model for the C4 photosynthetic pathway in developing wheat grains based upon tissue-specific transcriptome dataRangan, Parimalan, Furtado, Agnelo, Chinnusamy, Viswanathan and Henry, Robert (2024). A multi-cell model for the C4 photosynthetic pathway in developing wheat grains based upon tissue-specific transcriptome data. BioSystems, 238 105195, 105195. doi: 10.1016/j.biosystems.2024.105195 |
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2024 Journal Article Global Wild Rice Germplasm Resources Conservation Alliance: world wild-rice wiringZheng, Xiaoming, Ratnasekera, Disna, Fan, Jiayu, Henry, Robert J., Song, Beng-Kah, Olsen, Kenneth M., Joshi, Bal Krishna, Banaticla-Hilario, Maria Celeste N., Pusadee, Tonapha, Melaku, Adane Getachew, Estelle Loko, Yêyinou Laura, Vilayheuang, Koukham, Oppong, Gavers K., Poku, Samuel Aduse, Wambugu, Peterson W., Ge, Song, Junior, Aldo Merotto, Aung, Ohn Mar, Venuprasad, Ramaiah, Kohli, Ajay, Zhou, Wenbin and Qian, Qian (2024). Global Wild Rice Germplasm Resources Conservation Alliance: world wild-rice wiring. Molecular Plant, 17 (4), 516-518. doi: 10.1016/j.molp.2024.03.001 |
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2024 Journal Article The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivarsSalojärvi, Jarkko, Rambani, Aditi, Yu, Zhe, Guyot, Romain, Strickler, Susan, Lepelley, Maud, Wang, Cui, Rajaraman, Sitaram, Rastas, Pasi, Zheng, Chunfang, Muñoz, Daniella Santos, Meidanis, João, Paschoal, Alexandre Rossi, Bawin, Yves, Krabbenhoft, Trevor J., Wang, Zhen Qin, Fleck, Steven J., Aussel, Rudy, Bellanger, Laurence, Charpagne, Aline, Fournier, Coralie, Kassam, Mohamed, Lefebvre, Gregory, Métairon, Sylviane, Moine, Déborah, Rigoreau, Michel, Stolte, Jens, Hamon, Perla, Couturon, Emmanuel ... Descombes, Patrick (2024). The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars. Nature Genetics, 56 (4) s41588-024-01695-w, 721-731. doi: 10.1038/s41588-024-01695-w |
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2024 Journal Article The complex polyploid genome architecture of sugarcaneHealey, A. L., Garsmeur, O., Lovell, J. T., Shengquiang, S., Sreedasyam, A., Jenkins, J., Plott, C. B., Piperidis, N., Pompidor, N., Llaca, V., Metcalfe, C. J., Doležel, J., Cápal, P., Carlson, J. W., Hoarau, J. Y., Hervouet, C., Zini, C., Dievart, A., Lipzen, A., Williams, M., Boston, L. B., Webber, J., Keymanesh, K., Tejomurthula, S., Rajasekar, S., Suchecki, R., Furtado, A., May, G., Parakkal, P. ... D’Hont, A. (2024). The complex polyploid genome architecture of sugarcane. Nature, 628 (8009), 1-7. doi: 10.1038/s41586-024-07231-4 |
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2024 Journal Article Genome sequencing and protein modeling unraveled the 2AP biosynthesis in Bacillus cereus DB25Dhondge, Harshal V., Barvkar, Vitthal T., Dastager, Syed G., Dharne, Mahesh S., Rajput, Vinay, Pable, Anupama A., Henry, Robert J. and Nadaf, Altafhusain B. (2024). Genome sequencing and protein modeling unraveled the 2AP biosynthesis in Bacillus cereus DB25. International Journal of Food Microbiology, 413 110600, 1-11. doi: 10.1016/j.ijfoodmicro.2024.110600 |
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2024 Journal Article Crop domestication in the Asia Pacific region: a reviewOkemo, Pauline, Wijesundra, Upendra, Nakandala, Upuli, Dillon, Natalie, Chandora, Rahul, Campbell, Bradley, Smith, Millicent, Hardner, Craig, Cadorna, Charles A., Martin, Guillaume, Yahiaoui, Nabila, Garsmeur, Olivier, Pompidor, Nicolas, D’Hont, Angelique and Henry, Robert J. (2024). Crop domestication in the Asia Pacific region: a review. Agriculture Communications, 2 (1) 100032, 100032. doi: 10.1016/j.agrcom.2024.100032 |
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2024 Journal Article Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stressAl-Dossary, Othman, Furtado, Agnelo, Kharabian Masouleh, Ardashir, Alsubaie, Bader, Al-Mssallem, Ibrahim and Henry, Robert J. (2024). Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stress. Current Plant Biology, 37 100311, 100311. doi: 10.1016/j.cpb.2023.100311 |
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2024 Journal Article Genome-wide association mapping of genes for anthocyanin and flavonoid contents in Vietnamese landraces of black ricePham, Cuong Hung, Do, Tuyen Duc, Nguyen, Hoa Thi Lan, Hoang, Nga Thi, Tran, Trung Duc, Vu, Mi Thi Thao, Doi, Hanh Hong, Bui, Thu-Giang Thi and Henry, Robert James (2024). Genome-wide association mapping of genes for anthocyanin and flavonoid contents in Vietnamese landraces of black rice. Euphytica, 220 (1) 11. doi: 10.1007/s10681-023-03268-0 |
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2024 Journal Article Advancing tropical plant research: how the International Conference on Tropical Plants (ICTP) drives innovation and collaborationZhang, Xiaolong, Wang, Wenquan, Henry, Robert J. and Chen, Fei (2024). Advancing tropical plant research: how the International Conference on Tropical Plants (ICTP) drives innovation and collaboration. Tropical Plants, 3 (1) e038. doi: 10.48130/tp-0024-0040 |
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2024 Journal Article An improved haplotype resolved genome reveals more rice genesAbdullah, Muhammad, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Okemo, Pauline and Henry, Robert (2024). An improved haplotype resolved genome reveals more rice genes. Tropical Plants, 3 (1) e009. doi: 10.48130/tp-0024-0007 |
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2024 Journal Article Phylogenetic relationships in the genus Mangifera based on whole chloroplast genome and nuclear genome sequencesWijesundara, Upendra Kumari, Furtado, Agnelo, Dillon, Natalie L., Masouleh, Ardashir Kharabian and Henry, Robert J (2024). Phylogenetic relationships in the genus Mangifera based on whole chloroplast genome and nuclear genome sequences. Tropical Plants, 3 (1) e034. doi: 10.48130/tp-0024-0031 |
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2024 Book Chapter Application of Genomics in Supporting Efficient Conservation and Utilization of Plant Genetic ResourcesWambugu, Peterson W., Ndjiondjop, Marie-Noelle, Rangan, Parimalan and Henry, Robert J. (2024). Application of Genomics in Supporting Efficient Conservation and Utilization of Plant Genetic Resources. Sustainable Development and Biodiversity. (pp. 339-361) Singapore: Springer. doi: 10.1007/978-981-99-5245-8_10 |
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2023 Journal Article Transdisciplinary approaches to understanding past Australian Aboriginal foodwaysWestaway, Michael C., Wright, Nathan, Crowther, Alison, Silcock, Jennifer, Carter, Rodney, Moss, Patrick and Henry, Robert (2023). Transdisciplinary approaches to understanding past Australian Aboriginal foodways. Archaeology of Food and Foodways, 2 (1), 47-74. doi: 10.1558/aff.18161 |
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2023 Journal Article The effects of UV light and methyl salicylate on phytochemical constituents and nutritional traits in common bean (Phaseolus vulgaris L.)Ha, P. T.T., Tran, N. T.B., Tuyen, P. T., Mason, P., Henry, R. J. and Loi, T. T. (2023). The effects of UV light and methyl salicylate on phytochemical constituents and nutritional traits in common bean (Phaseolus vulgaris L.). Legume Research, 46 (12) LRF-754, 1597-1603. doi: 10.18805/LRF-754 |
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2023 Journal Article Long read sequencing to reveal the full complexity of a plant transcriptome by targeting both standard and long workflowsAl-Dossary, Othman, Furtado, Agnelo, KharabianMasouleh, Ardashir, Alsubaie, Bader, Al-Mssallem, Ibrahim and Henry, Robert J. (2023). Long read sequencing to reveal the full complexity of a plant transcriptome by targeting both standard and long workflows. Plant Methods, 19 (1) 112. doi: 10.1186/s13007-023-01091-1 |
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2023 Journal Article Assessment of the physical, chemical, yield and nutritional quality traits of tropical, temperate and wild dry bean species in VietnamHa, P. T. T., Hiep, T. T. M., Thai, H. N., Liem, N. T., Thuy, D. T. K. and Henry, R. J. (2023). Assessment of the physical, chemical, yield and nutritional quality traits of tropical, temperate and wild dry bean species in Vietnam. Legume Research, 46 (11) LRF-751, 1413-1421. doi: 10.18805/LRF-751 |
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2023 Journal Article Loss of plastid ndh genes in an autotropic desert plantKharabian-Masouleh, Ardashir, Furtado, Agnelo, Alsubaie, Bader, Al-Dossary, Othman, Wu, Alex, Al-Mssalem, Ibrahim and Henry, Robert (2023). Loss of plastid ndh genes in an autotropic desert plant. Computational and Structural Biotechnology Journal, 21, 5016-5027. doi: 10.1016/j.csbj.2023.10.023 |
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2023 Journal Article Polyphenol contents, gas chromatography-mass spectrometry (GC–MS) and antibacterial activity of methanol extract and fractions of Sonneratia caseolaris fruits from Ben Tre Province in VietnamTran, Thien khanh, Ha, Pham Thi Thu, Henry, Robert. J., Nguyen, Dang Nguyen Thao, Tuyen, Phung Thi and Liem, Nguyen Thanh (2023). Polyphenol contents, gas chromatography-mass spectrometry (GC–MS) and antibacterial activity of methanol extract and fractions of Sonneratia caseolaris fruits from Ben Tre Province in Vietnam. Journal of Microbiology and Biotechnology, 34 (1), 94-102. doi: 10.4014/jmb.2304.04019 |
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2023 Journal Article Highly sex specific gene expression in JojobaAlsubaie, Bader, Kharabian-Masouleh, Ardashir, Furtado, Agnelo, Al-Dossary, Othman, Al-Mssallem, Ibrahim and Henry, Robert J. (2023). Highly sex specific gene expression in Jojoba. BMC Plant Biology, 23 (1) 440, 440. doi: 10.1186/s12870-023-04444-z |
