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2019

Journal Article

Tissue-specific sex-differences in human gene expression

Kassam, Irfahan, Wu, Yang, Yang, Jian, Visscher, Peter M. and McRae, Allan F. (2019). Tissue-specific sex-differences in human gene expression. Human Molecular Genetics, 28 (17), 2976-2986. doi: 10.1093/hmg/ddz090

Tissue-specific sex-differences in human gene expression

2019

Journal Article

Examining the impact of imputation errors on fine-mapping using DNA methylation QTL as a model trait

Chundru, V. Kartik, Marioni, Riccardo E., Prendergast, James G. D., Vallerga, Costanza L., Lin, Tian, Berveridge, Allan J., SGPD Consortium, Gratten, Jacob, Hume, David A., Deary, Ian J., Wray, Naomi R., Visscher, Peter M. and McRae, Allan F. (2019). Examining the impact of imputation errors on fine-mapping using DNA methylation QTL as a model trait. Genetics, 212 (3), 577-586. doi: 10.1534/genetics.118.301861

Examining the impact of imputation errors on fine-mapping using DNA methylation QTL as a model trait

2019

Journal Article

Genome-wide association study of medication-use and associated disease in the UK Biobank

Wu, Yeda, Byrne, Enda M., Zheng, Zhili, Kemper, Kathryn E., Yengo, Loic, Mallett, Andrew J., Yang, Jian, Visscher, Peter M. and Wray, Naomi R. (2019). Genome-wide association study of medication-use and associated disease in the UK Biobank. Nature Communications, 10 (1) 1891, 1891. doi: 10.1038/s41467-019-09572-5

Genome-wide association study of medication-use and associated disease in the UK Biobank

2019

Journal Article

Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability

Reynolds, Regina H., Botia, Juan, Nalls, Mike A., Hardy, John, Taliun, Sarah A. Gagliano, Ryten, Mina, Noyce, Alastair J., Nicolas, Aude, Cookson, Mark R., Bandres-Ciga, Sara, Gibbs, J. Raphael, Hernandez, Dena G., Singleton, Andrew B., Reed, Xylena, Leonard, Hampton, Blauwendraat, Cornelis, Faghri, Faraz, Bras, Jose, Guerreiro, Rita, Tucci, Arianna, Kia, Demis A., Houlden, Henry, Plun-Favreau, Helene, Mok, Kin Y., Wood, Nicholas W., Lovering, Ruth, R'Bibo, Lea, Rizig, Mie, Chelban, Viorica ... Pearson, John (2019). Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability. Npj Parkinsons Disease, 5 (1) 6, 6. doi: 10.1038/s41531-019-0076-6

Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability

2019

Journal Article

Steroid receptor coactivator-1 modulates the function of Pomc neurons and energy homeostasis

Yang, Yongjie, van der Klaauw, Agatha A., Zhu, Liangru, Cacciottolo, Tessa M., He, Yanlin, Stadler, Lukas K. J., Wang, Chunmei, Xu, Pingwen, Saito, Kenji, Hinton, Antentor, Yan, Xiaofeng, Keogh, Julia M., Henning, Elana, Banton, Matthew C., Hendricks, Audrey E., Bochukova, Elena G., Mistry, Vanisha, Lawler, Katherine L., Liao, Lan, Xu, Jianming, O'Rahilly, Stephen, Tong, Qingchun, Barroso, Ines, O'Malley, Bert W., Farooqi, I. Sadaf, Xu, Yong, Balasubramanian, Senduran, Clapham, Peter, Coates, Guy ... Zhang, Weihua (2019). Steroid receptor coactivator-1 modulates the function of Pomc neurons and energy homeostasis. Nature Communications, 10 (1) 1718. doi: 10.1038/s41467-019-08737-6

Steroid receptor coactivator-1 modulates the function of Pomc neurons and energy homeostasis

2019

Journal Article

Assessment of bidirectional relationships between physical activity and depression among adults A 2-Sample mendelian randomization study

Choi, Karmel W., Chen, Chia-Yen, Stein, Murray B., Klimentidis, Yann C., Wang, Min-Jung, Koenen, Karestan C., Smoller, Jordan W., Wray, Naomi R., Ripke, Stephan, Mattheisen, Manuel, Trzaskowski, Maciej, Byrne, Enda M., Abdellaoui, Abdel, Adams, Mark J., Agerbo, Esben, Air, TracyM., Andlauer, Till F. M., Bacanu, Silviu-Alin, Baekvad-Hansen, Marie, Beekman, Aartjan T. F., Bigdeli, Tim B., Binder, Elisabeth B., Blackwood, Douglas H. R., Bryois, Julien, Buttenschon, Henriette N., Bybjerg-Grauholm, Jonas, Cai, Na, Castelao, Enrique, Hvarregaard, Jane ... Sullivan, Patrick F. (2019). Assessment of bidirectional relationships between physical activity and depression among adults A 2-Sample mendelian randomization study. JAMA Psychiatry, 76 (4), 399-408. doi: 10.1001/jamapsychiatry.2018.4175

Assessment of bidirectional relationships between physical activity and depression among adults A 2-Sample mendelian randomization study

2019

Journal Article

From R.A. Fisher’s 1918 paper to GWAS a century later

Visscher, Peter M. and Goddard, Michael E. (2019). From R.A. Fisher’s 1918 paper to GWAS a century later. Genetics, 211 (4), 1125-1130. doi: 10.1534/genetics.118.301594

From R.A. Fisher’s 1918 paper to GWAS a century later

2019

Journal Article

Population-based identity-by-descent mapping combined with exome sequencing to detect rare risk variants for schizophrenia

Harold, Denise, Connolly, Siobhan, Riley, Brien P., Kendler, Kenneth S., McCarthy, Shane E., McCombie, William R., Richards, Alex, Owen, Michael J., O'Donovan, Michael C., Walters, James, Donnelly, Peter, Bates, Lesley, Barroso, Ines, Blackwell, Jenefer M., Bramon, Elvira, Brown, Matthew A., Casas, Juan P., Corvin, Aiden, Deloukas, Panos, Duncanson, Audrey, Jankowski, Janusz, Markus, Hugh S., Mathew, Christopher G., Palmer, Colin N. A., Plomin, Robert, Rautanen, Anna, Sawcer, Stephen J., Trembath, Richard C., Viswanathan, Ananth C. ... Morris, Derek W. (2019). Population-based identity-by-descent mapping combined with exome sequencing to detect rare risk variants for schizophrenia. American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics, 180 (3), 223-231. doi: 10.1002/ajmg.b.32716

Population-based identity-by-descent mapping combined with exome sequencing to detect rare risk variants for schizophrenia

2019

Journal Article

Gene expression imputation across multiple brain regions provides insights into schizophrenia risk

Huckins, Laura M., Dobbyn, Amanda, Ruderfer, Douglas M., Hoffman, Gabriel, Wang, Weiqing, Pardiñas, Antonio F., Rajagopal, Veera M., Als, Thomas D., T. Nguyen, Hoang, Girdhar, Kiran, Boocock, James, Roussos, Panos, Fromer, Menachem, Kramer, Robin, Domenici, Enrico, Gamazon, Eric R., Purcell, Shaun, Johnson, Jessica S., Shah, Hardik R., Klein, Lambertus L., Dang, Kristen K., Logsdon, Benjamin A., Mahajan, Milind C., Mangravite, Lara M., Toyoshiba, Hiroyoshi, Gur, Raquel E., Hahn, Chang-Gyu, Schadt, Eric, Lewis, David A. ... Stahl, Eli A. (2019). Gene expression imputation across multiple brain regions provides insights into schizophrenia risk. Nature Genetics, 51 (4), 659-674. doi: 10.1038/s41588-019-0364-4

Gene expression imputation across multiple brain regions provides insights into schizophrenia risk

2019

Journal Article

Isolation of novel quorum-sensing active bacteria from microbial mats in Shark Bay Australia

Charlesworth, James C., Watters, Cara, Wong, Hon Lun, Visscher, Pieter T. and Burns, Brendan P. (2019). Isolation of novel quorum-sensing active bacteria from microbial mats in Shark Bay Australia. Fems Microbiology Ecology, 95 (4) fiz035. doi: 10.1093/femsec/fiz035

Isolation of novel quorum-sensing active bacteria from microbial mats in Shark Bay Australia

2019

Journal Article

Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic prediction

Wray, Naomi R., Kemper, Kathryn E., Hayes, Benjamin J., Goddard, Michael E. and Visscher, Peter M. (2019). Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic prediction. Genetics, 211 (4), 1131-1141. doi: 10.1534/genetics.119.301859

Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic prediction

2019

Journal Article

Identification of common genetic risk variants for autism spectrum disorder

Grove, Jakob, Ripke, Stephan, Als, Thomas D., Mattheisen, Manuel, Walters, Raymond K., Won, Hyejung, Pallesen, Jonatan, Agerbo, Esben, Andreassen, Ole A., Anney, Richard, Awashti, Swapnil, Belliveau, Rich, Bettella, Francesco, Buxbaum, Joseph D., Bybjerg-Grauholm, Jonas, Bækvad-Hansen, Marie, Cerrato, Felecia, Chambert, Kimberly, Christensen, Jane H., Churchhouse, Claire, Dellenvall, Karin, Demontis, Ditte, De Rubeis, Silvia, Devlin, Bernie, Djurovic, Srdjan, Dumont, Ashley L., Goldstein, Jacqueline I., Hansen, Christine S., Hauberg, Mads Engel ... Børglum, Anders D. (2019). Identification of common genetic risk variants for autism spectrum disorder. Nature Genetics, 51 (3), 431-444. doi: 10.1038/s41588-019-0344-8

Identification of common genetic risk variants for autism spectrum disorder

2019

Journal Article

Author correction: Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes

Lakhani, Chirag M., Tierney, Braden T., Manrai, Arjun K., Yang, Jian, Visscher, Peter M. and Patel, Chirag J. (2019). Author correction: Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes. Nature Genetics, 51 (4), 764-765. doi: 10.1038/s41588-019-0377-z

Author correction: Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes

2019

Journal Article

Commentary: Fisher 1918: the foundation of the genetics and analysis of complex traits

Visscher, Peter M. and Bruce Walsh, J. (2019). Commentary: Fisher 1918: the foundation of the genetics and analysis of complex traits. International Journal of Epidemiology, 48 (1), 10-12. doi: 10.1093/ije/dyx129

Commentary: Fisher 1918: the foundation of the genetics and analysis of complex traits

2019

Journal Article

Low-frequency variation in TP53 has large effects on head circumference and intracranial volume

Haworth, Simon, Shapland, Chin Yang, Hayward, Caroline, Prins, Bram P., Felix, Janine F., Medina-Gomez, Carolina, Rivadeneira, Fernando, Wang, Carol, Ahluwalia, Tarunveer S., Vrijheid, Martine, Guxens, Mònica, Sunyer, Jordi, Tachmazidou, Ioanna, Walter, Klaudia, Iotchkova, Valentina, Jackson, Andrew, Cleal, Louise, Huffmann, Jennifer, Min, Josine L., Sass, Lærke, Timmers, Paul R. H. J., Turki, Saeed Al, Anderson, Carl A., Anney, Richard, Antony, Dinu, Artigas, María Soler, Ayub, Muhammad, Bala, Senduran, Barrett, Jeffrey C. ... St Pourcain, Beate (2019). Low-frequency variation in TP53 has large effects on head circumference and intracranial volume. Nature Communications, 10 (1) 357. doi: 10.1038/s41467-018-07863-x

Low-frequency variation in TP53 has large effects on head circumference and intracranial volume

2019

Journal Article

Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes

Lakhani, Chirag M., Tierney, Braden T., Manrai, Arjun K., Yang, Jian, Visscher, Peter M. and Patel, Chirag J. (2019). Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes. Nature Genetics, 51 (2), 327-334. doi: 10.1038/s41588-018-0313-7

Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes

2019

Journal Article

Publisher Correction: Multi-trait analysis of genome-wide association summary statistics using MTAG (Nature Genetics, (2018), 50, 2, (229-237), 10.1038/s41588-017-0009-4)

Turley, Patrick, Walters, Raymond K., Maghzian, Omeed, Okbay, Aysu, Lee, James J., Fontana, Mark Alan, Nguyen-Viet, Tuan Anh, Wedow, Robbee, Zacher, Meghan, Furlotte, Nicholas A., Agee, Michelle, Alipanahi, Babak, Auton, Adam, Bell, Robert K., Bryc, Katarzyna, Elson, Sarah L., Fontanillas, Pierre, Furlotte, Nicholas A., Hinds, David A., Hromatka, Bethann S., Huber, Karen E., Kleinman, Aaron, Litterman, Nadia K., McIntyre, Matthew H., Mountain, Joanna L., Northover, Carrie A. M., Sathirapongsasuti, J. Fah, Sazonova, Olga V., Shelton, Janie F. ... Benjamin, Daniel J. (2019). Publisher Correction: Multi-trait analysis of genome-wide association summary statistics using MTAG (Nature Genetics, (2018), 50, 2, (229-237), 10.1038/s41588-017-0009-4). Nature Genetics, 51 (7), 1190-1190. doi: 10.1038/s41588-019-0444-5

Publisher Correction: Multi-trait analysis of genome-wide association summary statistics using MTAG (Nature Genetics, (2018), 50, 2, (229-237), 10.1038/s41588-017-0009-4)

2019

Journal Article

Meta-analysis of genome-wide association studies for body fat distribution in 694 649 individuals of European ancestry

Pulit, Sara L., Stoneman, Charli, Morris, Andrew P., Wood, Andrew R., Glastonbury, Craig A., Tyrrell, Jessica, Yengo, Loïc, Ferreira, Teresa, Marouli, Eirini, Ji, Yingjie, Yang, Jian, Jones, Samuel, Beaumont, Robin, Croteau-Chonka, Damien C., Winkler, Thomas W., Consortium, Giant, Hattersley, Andrew T., Loos, Ruth J F, Hirschhorn, Joel N., Visscher, Peter M., Frayling, Timothy M., Yaghootkar, Hanieh and Lindgren, Cecilia M. (2019). Meta-analysis of genome-wide association studies for body fat distribution in 694 649 individuals of European ancestry. Human Molecular Genetics, 28 (1), 166-174. doi: 10.1093/hmg/ddy327

Meta-analysis of genome-wide association studies for body fat distribution in 694 649 individuals of European ancestry

2019

Journal Article

The lacustrine microbial carbonate factory of the successive Lake Bonneville and Great Salt Lake, Utah, USA

Vennin, Emmanuelle, Bouton, Anthony, Bourillot, Raphael, Pace, Aurelie, Roche, Adeline, Brayard, Arnaud, Thomazo, Christophe, Virgone, Aurelien, Gaucher, Eric C., Desaubliaux, Guy and Visscher, Pieter T. (2019). The lacustrine microbial carbonate factory of the successive Lake Bonneville and Great Salt Lake, Utah, USA. Sedimentology, 66 (1), 165-204. doi: 10.1111/sed.12499

The lacustrine microbial carbonate factory of the successive Lake Bonneville and Great Salt Lake, Utah, USA

2019

Journal Article

Evidence for increased genetic risk load for major depression in patients assigned to electroconvulsive therapy

Foo, Jerome C., Streit, Fabian, Frank, Josef, Witt, Stephanie H., Treutlein, Jens, Baune, Bernhard T., Moebus, Susanne, Joeckel, Karl-Heinz, Forstner, Andreas J., Noethen, Markus M., Rietschel, Marcella, Sartorius, Alexander, Kranaster, Laura, Wray, Naomi R., Ripke, Stephan, Mattheisen, Manuel, Trzaskowski, Maciej, Byrne, Enda M., Abdellaoui, Abdel, Adams, Mark J., Agerbo, Esben, Air, Tracy M., Andlauer, Till F. M., Bacanu, Silviu-Alin, Baekvad-Hansen, Marie, Beekman, Aartjan T. F., Bigdeli, Tim B., Binder, Elisabeth B., Blackwood, Douglas H. R. ... Sullivan, Patrick F. (2019). Evidence for increased genetic risk load for major depression in patients assigned to electroconvulsive therapy. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, 180 (1), 35-45. doi: 10.1002/ajmg.b.32700

Evidence for increased genetic risk load for major depression in patients assigned to electroconvulsive therapy