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2025

Journal Article

Is the biogeography of the mucosa-associated microbiota a key factor affecting primary sclerosing cholangitis disease course and treatment?

Lim, Yenkai, Kang, Seungha, Shah, Ayesha, Holtmann, Gerald and Morrison, Mark (2025). Is the biogeography of the mucosa-associated microbiota a key factor affecting primary sclerosing cholangitis disease course and treatment?. Gut, 74 (4), 692-693. doi: 10.1136/gutjnl-2024-334069

Is the biogeography of the mucosa-associated microbiota a key factor affecting primary sclerosing cholangitis disease course and treatment?

2024

Journal Article

The biogeography of the mucosa-associated microbiome in health and disease

Sternes, Peter R., Shah, Ayesha, Ayala Pintos, Camila, Fairlie, Thomas, Koloski, Natasha, Kang, Seungha, Tousignant, Kaylyn D., McIlroy, Simon J., Morrison, Mark, Tyson, Gene W. and Holtmann, Gerald J. (2024). The biogeography of the mucosa-associated microbiome in health and disease. Frontiers in Microbiology, 15 1454910, 1-14. doi: 10.3389/fmicb.2024.1454910

The biogeography of the mucosa-associated microbiome in health and disease

2024

Conference Publication

The biogeography of the mucosa-associated microbiota is associated with the presence and symptom severity of inflammatory bowel disease, proton pump inhibitor usage, and visceral sensitivity

Sternes, Peter, Shah, Ayesha, Pintos, Camila Ayela, Fairlie, Thomas, Koloski, Natasha, Kang, Seungha, Mcilroy, Simon, Morrison, Mark, Tyson, Gene and Holtmann, Gerald (2024). The biogeography of the mucosa-associated microbiota is associated with the presence and symptom severity of inflammatory bowel disease, proton pump inhibitor usage, and visceral sensitivity. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) 2024, Adelaide, SA Australia, 14-16 September 2024. Richmond, VIC Australia: John Wiley & Sons.

The biogeography of the mucosa-associated microbiota is associated with the presence and symptom severity of inflammatory bowel disease, proton pump inhibitor usage, and visceral sensitivity

2024

Conference Publication

The Key Anti-inflammatory Bacterium Faecalibacterium Prausnitzii Is More Complex And Diverse Than Previously Recognised: Anatomic, Geographic, And Genomic Differences In The East And West And In Health And Crohn's Disease. The ENIGMA Study

Teh, Jing Jie, Kang, Seungha, Leonard, Alarna, Zhang, Jingwan, Zheng, Jiaying, Hu, Jielun, Hamilton, Amy L., Wilson-O'Brien, Amy, Trakman, Gina L., Stanley, Annalise, Ching, Jessica Y., Lin, Winnie Y., Sung, Joseph J.Y., Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2024). The Key Anti-inflammatory Bacterium Faecalibacterium Prausnitzii Is More Complex And Diverse Than Previously Recognised: Anatomic, Geographic, And Genomic Differences In The East And West And In Health And Crohn's Disease. The ENIGMA Study. Digestive Disease Week (DDW) 2024, Chicago, IL United States, 18-21 May 2024. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(24)01742-6

The Key Anti-inflammatory Bacterium Faecalibacterium Prausnitzii Is More Complex And Diverse Than Previously Recognised: Anatomic, Geographic, And Genomic Differences In The East And West And In Health And Crohn's Disease. The ENIGMA Study

2024

Conference Publication

Crohn's Disease Mucosal Microbiota Virulence Factor Gene Analysis Identifies Antibiotic Resistant Enterococcus Faecalis Linked To Immune Activation. The ENIGMA Study

Teh, Jing Jie, Kang, Seungha, Zhang, Jingwan, Hu, Jielun, Zheng, Jiaying, Hamilton, Amy L., Wilson-O'Brien, Amy, Trakman, Gina L., Stanley, Annalise, Ching, Jessica Y., Lin, Winnie Y., Sung, Joseph JY, Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2024). Crohn's Disease Mucosal Microbiota Virulence Factor Gene Analysis Identifies Antibiotic Resistant Enterococcus Faecalis Linked To Immune Activation. The ENIGMA Study. Digestive Disease Week (DDW) 2024, Chicago, IL United States, 18-21 May 2024. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(24)01741-4

Crohn's Disease Mucosal Microbiota Virulence Factor Gene Analysis Identifies Antibiotic Resistant Enterococcus Faecalis Linked To Immune Activation. The ENIGMA Study

2024

Conference Publication

The Role Of Proteus Mirabilis And Its Derived Metabolite Cadaverine In Altering Bacterial Composition And Metabolite Profile In Crohn's Disease

Zhang, Jingwan, Sun, Qianru, Hao, Fangjia, Teh, Jing Jie, Kang, Seungha, Hamilton, Amy L., O'Brien, Amy Wilson, Ching, Jessica Y., Sun, Yang, Miao, Yinglei, Sung, Joseph J.Y., Yu, Jun, Morrison, Mark, Kamm, Michael A. and Ng, Siew C. (2024). The Role Of Proteus Mirabilis And Its Derived Metabolite Cadaverine In Altering Bacterial Composition And Metabolite Profile In Crohn's Disease. Digestive Disease Week (DDW) 2024, Chicago, IL United States, 18-21 May 2024. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(24)01743-8

The Role Of Proteus Mirabilis And Its Derived Metabolite Cadaverine In Altering Bacterial Composition And Metabolite Profile In Crohn's Disease

2024

Conference Publication

Metagenomic Analysis Of Intra-household Transmission Patterns Of The Gut Microbiome In Crohn's Disease Across Populations

Zhang, Jingwan, Zheng, Jiaying, Sun, Qianru, Teh, Jing Jie, Kang, Seungha, Hamilton, Amy L., Brien, Amy Wilson O’, Ching, Jessica Y., Sun, Yang, Miao, Yinglei, Sung, Joseph J.Y., Yu, Jun, Morrison, Mark, Kamm, Michael A. and Ng, Siew C. (2024). Metagenomic Analysis Of Intra-household Transmission Patterns Of The Gut Microbiome In Crohn's Disease Across Populations. Digestive Disease Week (DDW) 2024, Chicago, IL United States, 18-21 May 2024. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(24)00569-9

Metagenomic Analysis Of Intra-household Transmission Patterns Of The Gut Microbiome In Crohn's Disease Across Populations

2024

Conference Publication

Quantifying Artificial Sweeteners And Emulsifiers In Crohn's Disease And Their Relationship With Disease With Disease Activity. The ENIGMA Study

Hu, Jielun, Zhang, Jingwan, Ruan, Yanjiao, Trakman, Gina L., Hamilton, Amy L., Lin, Winnie Y., Sun, Yang, Ching, Jessica Y., Teh, Jing Jie, Kang, Seungha, O’Brien, Amy Wilson, Stanley, Annalise, Sung, Joseph J.Y., Yu, Jun, Miao, Yinglei, Morrison, Mark, Kamm, Michael A. and Ng, Siew C. (2024). Quantifying Artificial Sweeteners And Emulsifiers In Crohn's Disease And Their Relationship With Disease With Disease Activity. The ENIGMA Study. Digestive Disease Week (DDW) 2024, Chicago, IL United States, 18-21 May 2024. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(24)03360-2

Quantifying Artificial Sweeteners And Emulsifiers In Crohn's Disease And Their Relationship With Disease With Disease Activity. The ENIGMA Study

2024

Conference Publication

The Duodenal Mucosa-associated Microbiota Of Patients With A Disorder Of Gut-brain Interaction Can Be Differentiated By Rome IV Criteria

Schooth, Lauren F., Kang, Seungha, Fairlie, Thomas, Lim, Yenkai, Teh, Jing Jie, Hoedt, Emily C., Keely, Simon, Shah, Ayesha, Holtmann, Gerald J. and Morrison, Mark (2024). The Duodenal Mucosa-associated Microbiota Of Patients With A Disorder Of Gut-brain Interaction Can Be Differentiated By Rome IV Criteria. Digestive Disease Week (DDW) 2024, Chicago, IL United States, 18-21 May 2024. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(24)02266-2

The Duodenal Mucosa-associated Microbiota Of Patients With A Disorder Of Gut-brain Interaction Can Be Differentiated By Rome IV Criteria

2024

Journal Article

Identification of the mechanism for dehalorespiration of monofluoroacetate in the phylum Synergistota

Leong, Lex E. X., Denman, Stuart E., Kang, Seungha, Mondot, Stanislas, Hugenholtz, Philip and McSweeney, Chris S. (2024). Identification of the mechanism for dehalorespiration of monofluoroacetate in the phylum Synergistota. Animal Bioscience, 37 (2), 396-403. doi: 10.5713/ab.23.0351

Identification of the mechanism for dehalorespiration of monofluoroacetate in the phylum Synergistota

2023

Journal Article

Effects of different feeding systems on ruminal fermentation, digestibility, methane emissions, and microbiota of Hanwoo steers

Lee, Seul, Kim, Jungeun, Baek, Youlchang, Seong, Pilnam, Song, Jaeyong, Kim, Minseok and Kang, Seungha (2023). Effects of different feeding systems on ruminal fermentation, digestibility, methane emissions, and microbiota of Hanwoo steers. Journal of Animal Science and Technology, 65 (6), 1270-1289. doi: 10.5187/jast.2023.e82

Effects of different feeding systems on ruminal fermentation, digestibility, methane emissions, and microbiota of Hanwoo steers

2023

Conference Publication

Variations of the mucosa associated microbiome in patients with primary sclerosing cholangitis, ulcerative colitis and asymptomatic controls along the gastrointestinal tract

Shah, Ayesha, Kang, Seungha, Fairlie, Thomas, Morrison, Mark and Holtmann, Gerald J. (2023). Variations of the mucosa associated microbiome in patients with primary sclerosing cholangitis, ulcerative colitis and asymptomatic controls along the gastrointestinal tract. Digestive Disease Week (DDW), Chicago, IL, United States, 6-9 May 2023. Philadelphia, PA, United States: Elsevier. doi: 10.1016/S0016-5085(23)01543-3

Variations of the mucosa associated microbiome in patients with primary sclerosing cholangitis, ulcerative colitis and asymptomatic controls along the gastrointestinal tract

2023

Journal Article

Alterations to the duodenal microbiota are linked to gastric emptying and symptoms in functional dyspepsia

Shanahan, Erin R., Kang, Seungha, Staudacher, Heidi, Shah, Ayesha, Do, Anh, Burns, Grace, Chachay, Veronique S., Koloski, Natasha A., Keely, Simon, Walker, Marjorie M., Talley, Nicholas J., Morrison, Mark and Holtmann, Gerald J. (2023). Alterations to the duodenal microbiota are linked to gastric emptying and symptoms in functional dyspepsia. Gut, 72 (5) 326158, 929-938. doi: 10.1136/gutjnl-2021-326158

Alterations to the duodenal microbiota are linked to gastric emptying and symptoms in functional dyspepsia

2023

Conference Publication

Density Of The Mucosal Bacterial Colonization Along The Gastrointestinal Tract In Health And Disease

Shah, Ayesha, Sternes, Peter R., Kang, Seungha, Pintos, Camila Ayala, Fairlie, Thomas, Tyson, Gene W., Morrison, Mark and Holtmann, Gerald J. (2023). Density Of The Mucosal Bacterial Colonization Along The Gastrointestinal Tract In Health And Disease. Digestive Disease Week (DDW) 2023, Chicago, IL United States, 6-9 May 2023. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(23)03108-6

Density Of The Mucosal Bacterial Colonization Along The Gastrointestinal Tract In Health And Disease

2023

Conference Publication

Impact Of Epidemiologic Evolution, Diet And Early Life Processed Food Intake On Microbiome Variance In Crohn's Disease. The International Enigma Study

Zhang, Jingwan, Sun, Qianru, Teh, Jing Jie, Kang, Seungha, Hu, Jielun, Lin, Winnie Y., Trakman, Gina L., Sun, Yang, Hamilton, Amy L., Wilson O’Brien, Amy, Ching, Jessica Y., Miao, Yinglei, Sung, Joseph JY, Yu, Jun, Morrison, Mark, Kamm, Michael A. and Ng, Siew C. (2023). Impact Of Epidemiologic Evolution, Diet And Early Life Processed Food Intake On Microbiome Variance In Crohn's Disease. The International Enigma Study. Digestive Disease Week (DDW) 2023, Chicago, IL United States, 6-9 May 2023. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(23)01261-1

Impact Of Epidemiologic Evolution, Diet And Early Life Processed Food Intake On Microbiome Variance In Crohn's Disease. The International Enigma Study

2023

Conference Publication

THE SECRETOMES OF COLONIC MUCOSA-ASSOCIATED MICROBIOTA IN CROHN'S DISEASE AND HEALTH IDENTIFY KEY BACTERIA DRIVING PRO- AND ANTI-INFLAMMATORY RESPONSES. THE ENIGMA STUDY

Teh, Jing Jie, Kang, Seungha, Zhang, Jingwan, Hu, Jielun, Hamilton, Amy L., Wilson-O'Brien, Amy, Trakman, Gina L., Lin, Winnie Y., Ching, Jessica Y., Sung, Joseph J. Y., Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2023). THE SECRETOMES OF COLONIC MUCOSA-ASSOCIATED MICROBIOTA IN CROHN'S DISEASE AND HEALTH IDENTIFY KEY BACTERIA DRIVING PRO- AND ANTI-INFLAMMATORY RESPONSES. THE ENIGMA STUDY. Digestive Disease Week (DDW), Chicago Il, May 06-09, 2023. PHILADELPHIA: W B SAUNDERS CO-ELSEVIER INC.

THE SECRETOMES OF COLONIC MUCOSA-ASSOCIATED MICROBIOTA IN CROHN'S DISEASE AND HEALTH IDENTIFY KEY BACTERIA DRIVING PRO- AND ANTI-INFLAMMATORY RESPONSES. THE ENIGMA STUDY

2023

Conference Publication

CHARACTERIZATION OF THE COLONIC MUCOSA-ASSOCIATED METAGENOME REVEALS NOVEL MICROBES AND GEOGRAPHICALLY DISTINCT COMMUNITIES IN HEALTH AND CROHN'S DISEASE. THE ENIGMA STUDY

Kang, Seungha, Teh, Jing Jie, Zhang, Jingwan, Hu, Jielun, Hamilton, Amy L., Wilson-O'Brien, Amy, Trakman, Gina L., Lin, Winnie Y., Ching, Jessica Y., Sung, Joseph J. Y., Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2023). CHARACTERIZATION OF THE COLONIC MUCOSA-ASSOCIATED METAGENOME REVEALS NOVEL MICROBES AND GEOGRAPHICALLY DISTINCT COMMUNITIES IN HEALTH AND CROHN'S DISEASE. THE ENIGMA STUDY. Digestive Disease Week (DDW), Chicago Il, May 06-09, 2023. PHILADELPHIA: W B SAUNDERS CO-ELSEVIER INC.

CHARACTERIZATION OF THE COLONIC MUCOSA-ASSOCIATED METAGENOME REVEALS NOVEL MICROBES AND GEOGRAPHICALLY DISTINCT COMMUNITIES IN HEALTH AND CROHN'S DISEASE. THE ENIGMA STUDY

2023

Conference Publication

The Secretomes Of Colonic Mucosa-associated Microbiota In Crohn's Disease And Health Identify Key Bacteria Driving Pro- And Anti-inflammatory Responses. The Enigma Study

Teh, Jing Jie, Kang, Seungha, Zhang, Jingwan, Hu, Jielun, Hamilton, Amy L., Wilson-O'Brien, Amy, Trakman, Gina L., Lin, Winnie Y., Ching, Jessica Y., Sung, Joseph JY, Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2023). The Secretomes Of Colonic Mucosa-associated Microbiota In Crohn's Disease And Health Identify Key Bacteria Driving Pro- And Anti-inflammatory Responses. The Enigma Study. Digestive Disease Week (DDW) 2023, Chicago, IL United States, 6-9 May 2023. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(23)03117-7

The Secretomes Of Colonic Mucosa-associated Microbiota In Crohn's Disease And Health Identify Key Bacteria Driving Pro- And Anti-inflammatory Responses. The Enigma Study

2023

Conference Publication

Characterization Of The Colonic Mucosa-associated Metagenome Reveals Novel Microbes And Geographically Distinct Communities In Health And Crohn's Disease. The Enigma Study

Kang, Seungha, Teh, Jing Jie, Zhang, Jingwan, Hu, Jielun, Hamilton, Amy L., Wilson-O'Brien, Amy, Trakman, Gina L., Lin, Winnie Y., Ching, Jessica Y., Sung, Joseph JY, Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2023). Characterization Of The Colonic Mucosa-associated Metagenome Reveals Novel Microbes And Geographically Distinct Communities In Health And Crohn's Disease. The Enigma Study. Digestive Disease Week (DDW) 2023, Chicago, IL United States, 6-9 May 2023. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(23)03125-6

Characterization Of The Colonic Mucosa-associated Metagenome Reveals Novel Microbes And Geographically Distinct Communities In Health And Crohn's Disease. The Enigma Study

2023

Conference Publication

IMPACT OF EPIDEMIOLOGIC EVOLUTION, DIET AND EARLY LIFE PROCESSED FOOD INTAKE ON MICROBIOME VARIANCE IN CROHN'S DISEASE. THE INTERNATIONAL ENIGMA STUDY

Zhang, Jingwan, Sun, Qianru, Teh, Jing Jie, Kang, Seungha, Hu, Jielun, Lin, Winnie Y., Trakman, Gina L., Sun, Yang, Hamilton, Amy L., Brien, Amy Wilson O', Ching, Jessica Y., Miao, Yinglei, Sung, Joseph J. Y., Yu, Jun, Morrison, Mark, Kamm, Michael A. and Ng, Siew C. (2023). IMPACT OF EPIDEMIOLOGIC EVOLUTION, DIET AND EARLY LIFE PROCESSED FOOD INTAKE ON MICROBIOME VARIANCE IN CROHN'S DISEASE. THE INTERNATIONAL ENIGMA STUDY. Digestive Disease Week (DDW), Chicago Il, May 06-09, 2023. PHILADELPHIA: W B SAUNDERS CO-ELSEVIER INC.

IMPACT OF EPIDEMIOLOGIC EVOLUTION, DIET AND EARLY LIFE PROCESSED FOOD INTAKE ON MICROBIOME VARIANCE IN CROHN'S DISEASE. THE INTERNATIONAL ENIGMA STUDY