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2025 Journal Article Is the biogeography of the mucosa-associated microbiota a key factor affecting primary sclerosing cholangitis disease course and treatment?Lim, Yenkai, Kang, Seungha, Shah, Ayesha, Holtmann, Gerald and Morrison, Mark (2025). Is the biogeography of the mucosa-associated microbiota a key factor affecting primary sclerosing cholangitis disease course and treatment?. Gut, 74 (4), 692-693. doi: 10.1136/gutjnl-2024-334069 |
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2024 Journal Article The biogeography of the mucosa-associated microbiome in health and diseaseSternes, Peter R., Shah, Ayesha, Ayala Pintos, Camila, Fairlie, Thomas, Koloski, Natasha, Kang, Seungha, Tousignant, Kaylyn D., McIlroy, Simon J., Morrison, Mark, Tyson, Gene W. and Holtmann, Gerald J. (2024). The biogeography of the mucosa-associated microbiome in health and disease. Frontiers in Microbiology, 15 1454910, 1-14. doi: 10.3389/fmicb.2024.1454910 |
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2024 Journal Article Identification of the mechanism for dehalorespiration of monofluoroacetate in the phylum SynergistotaLeong, Lex E. X., Denman, Stuart E., Kang, Seungha, Mondot, Stanislas, Hugenholtz, Philip and McSweeney, Chris S. (2024). Identification of the mechanism for dehalorespiration of monofluoroacetate in the phylum Synergistota. Animal Bioscience, 37 (2), 396-403. doi: 10.5713/ab.23.0351 |
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2023 Journal Article Effects of different feeding systems on ruminal fermentation, digestibility, methane emissions, and microbiota of Hanwoo steersLee, Seul, Kim, Jungeun, Baek, Youlchang, Seong, Pilnam, Song, Jaeyong, Kim, Minseok and Kang, Seungha (2023). Effects of different feeding systems on ruminal fermentation, digestibility, methane emissions, and microbiota of Hanwoo steers. Journal of Animal Science and Technology, 65 (6), 1270-1289. doi: 10.5187/jast.2023.e82 |
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2023 Journal Article Alterations to the duodenal microbiota are linked to gastric emptying and symptoms in functional dyspepsiaShanahan, Erin R., Kang, Seungha, Staudacher, Heidi, Shah, Ayesha, Do, Anh, Burns, Grace, Chachay, Veronique S., Koloski, Natasha A., Keely, Simon, Walker, Marjorie M., Talley, Nicholas J., Morrison, Mark and Holtmann, Gerald J. (2023). Alterations to the duodenal microbiota are linked to gastric emptying and symptoms in functional dyspepsia. Gut, 72 (5) 326158, 929-938. doi: 10.1136/gutjnl-2021-326158 |
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2023 Journal Article Effect of food additives on key bacterial taxa and the mucosa-associated microbiota in Crohn’s disease. The ENIGMA studyLoayza, J.J. Jimenez, Kang, S., Schooth, L., Teh, J. J., de Klerk, A., Noon, E. K., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O’Brien, A., Trakman, G. L., Lin, W., Ching, J., Or, L., Sung, J.J.Y., Yu, J., Ng, S.C., Kamm, M.A. and Morrison, M. (2023). Effect of food additives on key bacterial taxa and the mucosa-associated microbiota in Crohn’s disease. The ENIGMA study. Gut Microbes, 15 (1) 2172670, 1-18. doi: 10.1080/19490976.2023.2172670 |
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2022 Journal Article Increasing buffering capacity enhances rumen fermentation characteristics and alters rumen microbiota composition of high-concentrate fed Hanwoo steersRamos, Sonny C., Kim, Seon Ho, Jeong, Chang Dae, Mamuad, Lovelia L., Son, A-Rang, Kang, Seung Ha, Cho, Yong Il, Kim, Tae Gyu, Lee, Jin Sung, Cho, Kwang Keun, Lee, Sung Sill and Lee, Sang Suk (2022). Increasing buffering capacity enhances rumen fermentation characteristics and alters rumen microbiota composition of high-concentrate fed Hanwoo steers. Scientific Reports, 12 (1) 20739, 20739. doi: 10.1038/s41598-022-24777-3 |
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2022 Journal Article The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivityShah, Ayesha, Kang, Seungha, Talley, Nicholas J., Do, Anh, Walker, Marjorie M., Shanahan, Erin R., Koloski, Natasha A., Jones, Michael P., Keely, Simon, Morrison, Mark and Holtmann, Gerald J. (2022). The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivity. Gut Microbes, 14 (1) 2132078, 1-21. doi: 10.1080/19490976.2022.2132078 |
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2021 Journal Article In vitro assessment of rumen inocula between Jersey and Holstein steers with forage and concentrate substratesKim, Seon-Ho, Islam, Mahfuzul, Son, A-Rang, Lee, Sung-Sill, Kang, Seung-Ha, Cho, Yong-Il, Park, Kwang-Wook and Lee, Sang-Suk (2021). In vitro assessment of rumen inocula between Jersey and Holstein steers with forage and concentrate substrates. Journal of Agriculture and Life Science, 55 (3), 89-96. doi: 10.14397/jals.2021.55.3.89 |
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2021 Journal Article Novel strain-level resolution of Crohn’s disease mucosa-associated microbiota via an ex vivo combination of microbe culture and metagenomic sequencingTeh, J. J., Berendsen, E. M., Hoedt, E. C., Kang, S., Zhang, J., Zhang, F., Liu, Q., Hamilton, A. L., Wilson-O’Brien, A., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2021). Novel strain-level resolution of Crohn’s disease mucosa-associated microbiota via an ex vivo combination of microbe culture and metagenomic sequencing. The ISME Journal, 15 (11), 3326-3338. doi: 10.1038/s41396-021-00991-1 |
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2021 Journal Article Seasonal influence on rumen microbiota, rumen fermentation, and enteric methane emissions of Holstein and Jersey steers under the same total mixed rationIslam, Mahfuzul, Kim, Seon-Ho, Son, A-Rang, Ramos, Sonny C., Jeong, Chang-Dae, Yu, Zhongtang, Kang, Seung Ha, Cho, Yong-Il, Lee, Sung-Sill, Cho, Kwang-Keun and Lee, Sang-Suk (2021). Seasonal influence on rumen microbiota, rumen fermentation, and enteric methane emissions of Holstein and Jersey steers under the same total mixed ration. Animals, 11 (4) 1184, 1-22. doi: 10.3390/ani11041184 |
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2021 Journal Article Diet transition from high-forage to high-concentrate alters rumen bacterial community composition, epithelial transcriptomes and ruminal fermentation parameters in dairy cowsRamos, Sonny C., Jeong, Chang Dae, Mamuad, Lovelia L., Kim, Seon Ho, Kang, Seung Ha, Kim, Eun Tae, Cho, Yong Il, Lee, Sung Sill and Lee, Sang Suk (2021). Diet transition from high-forage to high-concentrate alters rumen bacterial community composition, epithelial transcriptomes and ruminal fermentation parameters in dairy cows. Animals, 11 (3) 838, 838-23. doi: 10.3390/ani11030838 |
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2020 Journal Article Characterisation and survey in cattle of a rumen Pyrimadobacter sp. which degrades the plant toxin fluoroacetateKang, Seungha, Khan, Shahjalal, Webb, Rick, Denman, Stuart and McSweeney, Chris (2020). Characterisation and survey in cattle of a rumen Pyrimadobacter sp. which degrades the plant toxin fluoroacetate. FEMS Microbiology Ecology, 96 (7) fiaa077, 1-11. doi: 10.1093/femsec/fiaa077 |
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2020 Journal Article Purified plant cell walls with adsorbed polyphenols alter porcine faecal bacterial communities during in vitro fermentationGrant, Lucas J., Mikkelsen, Deirdre, Phan, Anh Dao T., Kang, Seungha, Ouwerkerk, Diane, Klieve, Athol V., Gidley, Mike J. and Williams, Barbara (2020). Purified plant cell walls with adsorbed polyphenols alter porcine faecal bacterial communities during in vitro fermentation. Food and Function, 11 (1), 834-845. doi: 10.1039/c9fo02428j |
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2019 Journal Article Draft genome sequence and annotation of sporanaerobacter acetigenes strain F-12, isolated from a cattle rumenKang, Seungha, Denman, Stuart, Tahmasbi, Reza and McSweeney, Chris (2019). Draft genome sequence and annotation of sporanaerobacter acetigenes strain F-12, isolated from a cattle rumen. Microbiology Resource Announcements, 8 (30) e00634-19. doi: 10.1128/MRA.00634-19 |
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2019 Journal Article Draft genome sequence and annotation of Oribacterium sp. strain C9, isolated from a cattle rumenKang, Seungha, Denman, Stuart and McSweeney, Chris (2019). Draft genome sequence and annotation of Oribacterium sp. strain C9, isolated from a cattle rumen. Microbiology Resource Announcements, 8 (13) e01562-18. doi: 10.1128/mra.01562-18 |
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2016 Journal Article Soluble arabinoxylan enhances large intestinal microbial health biomarkers in pigs fed a red meat-containing dietWilliams, Barbara A., Zhang, Dagong, Lisle, Allan T., Mikkelsen, Deirdre, McSweeney C. S., Kang, Seungha, Bryden, Wayne L. and Gidley, Michael J. (2016). Soluble arabinoxylan enhances large intestinal microbial health biomarkers in pigs fed a red meat-containing diet. Nutrition, 32 (4), 491-497. doi: 10.1016/j.nut.2015.10.008 |
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2016 Journal Article Cloning and characterization of an endoglucanase gene from Actinomyces sp. Korean native goat 40Kim, Sung Chan, Kang, Seung Ha, Choi, Eun Young, Hong, Yeon Hee, Bok, Jin Duck, Kim, Jae Yeong, Lee, Sang Suk, Choi, Yun Jaie, Choi, In Soon and Cho, Kwang Keun (2016). Cloning and characterization of an endoglucanase gene from Actinomyces sp. Korean native goat 40. Asian-Australasian Journal of Animal Sciences, 29 (1), 126-133. doi: 10.5713/ajas.15.0616 |
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2016 Journal Article Addition of arabinoxylan and mixed linkage glucans in porcine diets affects the large intestinal bacterial populationsGorham, John B., Kang, Seungha, Williams, Barbara A., Grant, Lucas J., McSweeney, Christopher S., Gidley, Michael J. and Mikkelsen, Deirdre (2016). Addition of arabinoxylan and mixed linkage glucans in porcine diets affects the large intestinal bacterial populations. European Journal of Nutrition, 56 (6), 1-14. doi: 10.1007/s00394-016-1263-4 |
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2015 Journal Article Association between specific mucosa-associated microbiota in Crohn's disease at the time of resection and subsequent disease recurrence: a pilot studyDe Cruz, Peter, Kang, Seungha, Wagner, Josef, Buckley, Michael, Sim, Winnie H., Prideaux, Lani, Lockett, Trevor, McSweeney, Chris, Morrison, Mark, Kirkwood, Carl D. and Kamm, Michael A. (2015). Association between specific mucosa-associated microbiota in Crohn's disease at the time of resection and subsequent disease recurrence: a pilot study. Journal of Gastroenterology and Hepatology, 30 (2), 268-278. doi: 10.1111/jgh.12694 |
