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2013 Journal Article Transcriptomic and metabolic changes associated with photorespiratory ammonium accumulation in the model legume Lotus japonicusPérez-Delgado, Carmen M., García-Calderón, Margarita, Sánchez, Diego H., Udvardi, Michael K., Kopka, Joachim, Márquez, Antonio J. and Betti, Marco (2013). Transcriptomic and metabolic changes associated with photorespiratory ammonium accumulation in the model legume Lotus japonicus. Plant Physiology, 162 (4), 1834-1848. doi: 10.1104/pp.113.217216 |
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2013 Journal Article LegumeGRN: a gene regulatory network prediction server for functional and comparative studiesWang, Mingyi, Verdier, Jerome, Benedito, Vagner A, Tang, Yuhong, Murray, Jeremy D, Ge, Yinbing, Becker, Jörg D, Carvalho, Helena, Rogers, Christian, Udvardi, Michael and He, Ji (2013). LegumeGRN: a gene regulatory network prediction server for functional and comparative studies. PloS One, 8 (7) e67434. doi: 10.1371/journal.pone.0067434 |
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2013 Journal Article Rhizobial infection is associated with the development of peripheral vasculature in nodules of Medicago truncatulaGuan, Dian, Stacey, Nicola, Liu, Chengwu, Wen, Jiangqi, Mysore, Kirankumar S., Torres-Jerez, Ivone, Vernié, Tatiana, Tadege, Million, Zhou, Chuanen, Wang, Zeng-yu, Udvardi, Michael K., Oldroyd, Giles E. D. and Murray, Jeremy D. (2013). Rhizobial infection is associated with the development of peripheral vasculature in nodules of Medicago truncatula. Plant Physiology, 162 (1), 107-115. doi: 10.1104/pp.113.215111 |
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2013 Journal Article Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturationVerdier, Jerome, Torres-Jerez, Ivone, Wang, Mingyi, Andriankaja, Andry, Allen, Stacy N., He, Ji, Tang, Yuhong, Murray, Jeremy D. and Udvardi, Michael K. (2013). Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturation. Plant Journal, 74 (2), 351-362. doi: 10.1111/tpj.12119 |
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2013 Journal Article Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)Zhang, Ji-Yi, Lee, Yi-Ching, Torres-Jerez, Ivone, Wang, Mingyi, Yin, Yanbin, Chou, Wen-Chi, He, Ji, Shen, Hui, Srivastava, Avinash C., Pennacchio, Christa, Lindquist, Erika, Grimwood, Jane, Schmutz, Jeremy, Xu, Ying, Sharma, Manoj, Sharma, Rita, Bartley, Laura E., Ronald, Pamela C., Saha, Malay C., Dixon, Richard A., Tang, Yuhong and Udvardi, Michael K. (2013). Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.). Plant Journal, 74 (1), 160-173. doi: 10.1111/tpj.12104 |
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2013 Journal Article Transport and metabolism in legume-rhizobia symbiosesUdvardi, Michael and Poole, Philip S. (2013). Transport and metabolism in legume-rhizobia symbioses. Annual Review of Plant Biology, 64, 781-805. doi: 10.1146/annurev-arplant-050312-120235 |
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2013 Journal Article Cessation of photosynthesis in Lotus japonicus leaves leads to reprogramming of nodule metabolismTsikou, Daniela, Kalloniati, Chrysanthi, Fotelli, Mariangela N., Nikolopoulos, Dimosthenis, Katinakis, Panagiotis, Udvardi, Michael K., Rennenberg, Heinz and Flemetakis, Emmanouil (2013). Cessation of photosynthesis in Lotus japonicus leaves leads to reprogramming of nodule metabolism. Journal of Experimental Botany, 64 (5), 1317-1332. doi: 10.1093/jxb/ert015 |
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2013 Journal Article Medicago truncatula DNF2 is a PI-PLC-XD-containing protein required for bacteroid persistence and prevention of nodule early senescence and defense-like reactionsBourcy, Marie, Brocard, Lysiane, Pislariu, Catalina I., Cosson, Viviane, Mergaert, Peter, Tadege, Millon, Mysore, Kirankumar S., Udvardi, Michael K., Gourion, Benjamin and Ratet, Pascal (2013). Medicago truncatula DNF2 is a PI-PLC-XD-containing protein required for bacteroid persistence and prevention of nodule early senescence and defense-like reactions. New Phytologist, 197 (4), 1250-1261. doi: 10.1111/nph.12091 |
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2012 Journal Article Overexpression of AtLOV1 in Switchgrass Alters Plant Architecture, Lignin Content, and Flowering TimeXu, Bin, Sathitsuksanoh, Noppadon, Tang, Yuhong, Udvardi, Michael K., Zhang, Ji-Yi, Shen, Zhengxing, Balota, Maria, Harich, Kim, Zhang, Percival Y.-H. and Zhao, Bingyu (2012). Overexpression of AtLOV1 in Switchgrass Alters Plant Architecture, Lignin Content, and Flowering Time. PLoS ONE, 7 (12) e47399. doi: 10.1371/journal.pone.0047399 |
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2012 Journal Article Ascorbate oxidase: the unexpected involvement of a 'wasteful enzyme' in the symbioses with nitrogen-fixing bacteria and arbuscular mycorrhizal fungiBalestrini, Raffaella, Ott, Thomas, Güther, Mike, Bonfante, Paola, Udvardi, Michael K. and De Tullio, Mario C. (2012). Ascorbate oxidase: the unexpected involvement of a 'wasteful enzyme' in the symbioses with nitrogen-fixing bacteria and arbuscular mycorrhizal fungi. Plant Physiology and Biochemistry : PPB, 59, 71-79. doi: 10.1016/j.plaphy.2012.07.006 |
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2012 Journal Article Global regulation of reactive oxygen species scavenging genes in alfalfa root and shoot under gradual drought stress and recoveryKang, Yun and Udvardi, Michael (2012). Global regulation of reactive oxygen species scavenging genes in alfalfa root and shoot under gradual drought stress and recovery. Plant Signaling and Behavior, 7 (5), 539-543. doi: 10.4161/psb.19780 |
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2012 Journal Article MtPAR MYB transcription factor acts as an on switch for proanthocyanidin biosynthesis in Medicago truncatulaVerdier, Jerome, Zhao, Jian, Torres-Jerez, Ivone, Ge, Shujun, Liu, Chenggang, He, Xianzhi, Mysore, Kirankumar S., Dixon, Richard A. and Udvardi, Michael K. (2012). MtPAR MYB transcription factor acts as an on switch for proanthocyanidin biosynthesis in Medicago truncatula. Proceedings of the National Academy of Sciences of the United States of America, 109 (5), 1766-1771. doi: 10.1073/pnas.1120916109 |
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2012 Journal Article The integral membrane protein SEN1 is required for symbiotic nitrogen fixation in Lotus japonicus nodulesHakoyama, Tsuneo, Niimi, Kaori, Yamamoto, Takeshi, Isobe, Sawa, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Kumagai, Hirotaka, Umehara, Yosuke, Brossuleit, Katja, Petersen, Thomas R., Sandal, Niels, Stougaard, Jens, Udvardi, Michael K., Tamaoki, Masanori, Kawaguchi, Masayoshi, Kouchi, Hiroshi and Suganuma, Norio (2012). The integral membrane protein SEN1 is required for symbiotic nitrogen fixation in Lotus japonicus nodules. Plant & Cell Physiology, 53 (1), 225-236. doi: 10.1093/pcp/pcr167 |
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2012 Journal Article Comparative metabolomics of drought acclimation in model and forage legumesSanchez, Diego H., Schwabe, Franziska, Erban, Alexander, Udvardi, Michael K. and Kopka, Joachim (2012). Comparative metabolomics of drought acclimation in model and forage legumes. Plant, Cell and Environment, 35 (1), 136-149. doi: 10.1111/j.1365-3040.2011.02423.x |
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2012 Journal Article A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixationPislariu, Catalina I., Murray, Jeremy D., Wen, JiangQi, Cosson, Viviane, Muni, RajaSekhara Reddy Duvvuru, Wang, Mingyi, Benedito, Vagner A., Andriankaja, Andry, Cheng, Xiaofei, Jerez, Ivone Torres, Mondy, Samuel, Zhang, Shulan, Taylor, Mark E., Tadege, Million, Ratet, Pascal, Mysore, Kirankumar S., Chen, Rujin and Udvardi, Michael K. (2012). A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation. Plant Physiology, 159 (4), 1686-1699. doi: 10.1104/pp.112.197061 |
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2011 Journal Article The Medicago genome provides insight into the evolution of rhizobial symbiosesYoung, Nevin D., Debellé, Frédéric, Oldroyd, Giles E. D., Geurts, Rene, Cannon, Steven B., Udvardi, Michael K., Benedito, Vagner A., Mayer, Klaus F. X., Gouzy, Jérôme, Schoof, Heiko, Van De Peer, Yves, Proost, Sebastian, Cook, Douglas R., Meyers, Blake C., Spannagl, Manuel, Cheung, Foo, De Mita, Stéphane, Krishnakumar, Vivek, Gundlach, Heidrun, Zhou, Shiguo, Mudge, Joann, Bharti, Arvind K., Murray, Jeremy D., Naoumkina, Marina A., Rosen, Benjamin, Silverstein, Kevin A. T., Tang, Haibao, Rombauts, Stephane, Zhao, Patrick X. ... Roe, Bruce A. (2011). The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature, 480 (7378), 520-524. doi: 10.1038/nature10625 |
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2011 Journal Article System responses to long-term drought and re-watering of two contrasting alfalfa varietiesKang, Yun, Han, Yuanhong, Torres-Jerez, Ivone, Wang, Mingyi, Tang, Yuhong, Monteros, Maria and Udvardi, Michael (2011). System responses to long-term drought and re-watering of two contrasting alfalfa varieties. The Plant Journal, 68 (5), 871-889. doi: 10.1111/j.1365-313X.2011.04738.x |
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2011 Journal Article From model to crop: functional analysis of a STAY-GREEN gene in the model legume Medicago truncatula and effective use of the gene for alfalfa improvement1[W][OA]Zhou, Chuanen, Han, Lu, Pislariu, Catalina, Nakashima, Jin, Fu, Chunxiang, Jiang, Qingzhen, Quan, Li, Blancaflor, Elison B, Tang, Yuhong, Bouton, Joseph H, Udvardi, Michael, Xia, Guangmin and Wang, Zeng-Yu (2011). From model to crop: functional analysis of a STAY-GREEN gene in the model legume Medicago truncatula and effective use of the gene for alfalfa improvement1[W][OA]. Plant Physiology, 157 (3), 1483-1496. doi: 10.1104/pp.111.185140 |
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2011 Journal Article Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysisHan, Yuanhong, Kang, Yun, Torres-Jerez, Ivone, Cheung, Foo, Town, Christopher D., Zhao, Patrick X., Udvardi, Michael K. and Monteros, Maria J. (2011). Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis. BMC Genomics, 12, 1-11. doi: 10.1186/1471-2164-12-350 |
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2011 Journal Article Nodulation enhances dark CO₂ fixation and recycling in the model legume Lotus japonicusFotelli, Mariangela N, Tsikou, Daniela, Kolliopoulou, Anna, Aivalakis, Georgios, Katinakis, Panagiotis, Udvardi, Michael K, Rennenberg, Heinz and Flemetakis, Emmanouil (2011). Nodulation enhances dark CO₂ fixation and recycling in the model legume Lotus japonicus. Journal of Experimental Botany, 62 (8), 2959-71. doi: 10.1093/jxb/err009 |
