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2007 Journal Article Sponge Paleogenomics Reveals an Ancient Role for Carbonic Anhydrase in SkeletogenesisJackson, Daniel J., Macis, Luciana, Reitner, Joachim, Degnan, Bernard M. and Worheide, Gert (2007). Sponge Paleogenomics Reveals an Ancient Role for Carbonic Anhydrase in Skeletogenesis. Science, 316 (5833), 1893-1895. doi: 10.1126/science.1141560 |
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2007 Journal Article A PL10 vasa-like gene in the Kuruma shrimp Marsupenaeus japonicus (Bate) is expressed during development in the adult gonadSellars, M. J., Lyons, R. E., Grewe, P. M., Vuocolo, T., Leeton, L., Coman, G. J., Degnan, B. M. and Preston, N. P. (2007). A PL10 vasa-like gene in the Kuruma shrimp Marsupenaeus japonicus (Bate) is expressed during development in the adult gonad. Marine Biotechnology, 9 (3), 377-387. doi: 10.1007/s10126-007-6118-9 |
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2007 Journal Article Pleistocene isolation and recent gene flow in Haliotis asinina, an Indo-Pacific vetigastropod with limited dispersal capacityImron, Jeffrey, Bernadine, Hale, Peter, Degnan, Bernard M. and Degnan, Sandie M. (2007). Pleistocene isolation and recent gene flow in Haliotis asinina, an Indo-Pacific vetigastropod with limited dispersal capacity. Molecular Ecology, 16 (2), 289-304. doi: 10.1111/j.1365-294X.2006.03141.x |
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2007 Journal Article Stress-induced gene expression profiling in the black tiger shrimp Penaeus monodonde la Vega, E., Hall, M. R., Wilson, K. J., Reverter, A., Woods, R. G. and Degnan, B. M. (2007). Stress-induced gene expression profiling in the black tiger shrimp Penaeus monodon. Physiological Genomics, 31 (1), 126-138. doi: 10.1152/physiolgenomics.00068.2007 |
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2007 Journal Article Developmental expression of Hsp90, Hsp70 and HSF during morphogenesis in the vetigastropod Haliotis asininaGunter, H. M. and Degnan, B. M. (2007). Developmental expression of Hsp90, Hsp70 and HSF during morphogenesis in the vetigastropod Haliotis asinina. Development Genes and Evolution, 217 (8), 603-612. doi: 10.1007/s00427-007-0171-2 |
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2007 Journal Article A post-synaptic scaffold at the origin of the animal kingdomSakarya, O., Armstrong, K. A., Adamska, M. A., Adamski, M. R., Wang, I-F., Tidor, B., Degnan, B. M., Oakley, T. H. and Kosik, K. S. (2007). A post-synaptic scaffold at the origin of the animal kingdom. PLoS ONE, 2 (6) e506, 1-9. doi: 10.1371/journal.pone.0000506 |
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2007 Journal Article Wnt and TGF-b expression in the sponge Amphimedon queenslandica and the origin of metazoan embryonic patterningAdamska, Maja, Degnan, Sandie M., Green, Kathryn M., Adamski, Marcin, Craigie, Alina, Larroux, Claire and Degnan, Bernard M. (2007). Wnt and TGF-b expression in the sponge Amphimedon queenslandica and the origin of metazoan embryonic patterning. PLoS One, 2 (10) e1031, 1-6. doi: 10.1371/journal.pone.0001031 |
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2007 Journal Article Differential expression of immune-related genes and transposable elements in black tiger shrimp (Penaeus monodon) exposed to a range of environmental stressorsde la Vega, E., Degnan, B. M., Hall, M. R. and Wilson, K. J. (2007). Differential expression of immune-related genes and transposable elements in black tiger shrimp (Penaeus monodon) exposed to a range of environmental stressors. Fish & Shellfish Immunology, 23 (5), 1072-1088. doi: 10.1016/j.fsi.2007.05.001 |
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2007 Journal Article Dynamic expression of ancient and novel molluscan shell genes during ecological transitionsJackson, D. J., Worheide, G. and Degnan, B. M. (2007). Dynamic expression of ancient and novel molluscan shell genes during ecological transitions. BMC Evolutionary Biology, 7 (160) 160, 1-17. doi: 10.1186/1471-2148-7-160 |
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2007 Journal Article Origin and diversification of the basic helix-loop-helix gene family in metazoans: Insights from comparative genomicsSimionato, E., Ledent, V., Richards, G., Thomas-Chollier, M., Kerner, P., Coornaert, D., Degnan, B. M. and Vervoort, M. (2007). Origin and diversification of the basic helix-loop-helix gene family in metazoans: Insights from comparative genomics. BMC Evolutionary Biology, 7 (33) 33, 1-18. doi: 10.1186/1471-2148-7-33 |
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2007 Journal Article Phylogenetic analyses under secondary structure-specific substitution models outperform traditional approaches: Case studies with diploblast LSUErpenbeck, D., Nichols, S. A., Voigt, O., Dohrmann, M., Degnan, B. M., Hooper, J. N. A. and Worheide, G. (2007). Phylogenetic analyses under secondary structure-specific substitution models outperform traditional approaches: Case studies with diploblast LSU. Journal of Molecular Evolution, 64 (5), 543-557. doi: 10.1007/s00239-006-0146-3 |
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2007 Journal Article Affinities of the family Sollasellidae (Porifera, Demospongiae). II. Molecular evidenceErpenbeck, Dirk, Hooper, John N. A., List-Armitage, Sue E., Degnan, Bernard M., Wörheide, Gert and van Soest, Rob W. M. (2007). Affinities of the family Sollasellidae (Porifera, Demospongiae). II. Molecular evidence. Contributions to Zoology, 76 (2), 95-102. doi: 10.1163/18759866-07602003 |
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2007 Journal Article The effect of ionizing irradiation of post-larvae on subsequent survival and reproductive performance in the Kuruma shrimp, Penaeus (Marmpenaeus) japonicus (Bate)Sellars, Melony J., Coman, Greg J., Callaghan, Tamera R., Arnold, Stuart J., Wakeling, Jan, Degnan, Bernard M. and Preston, Nigel P. (2007). The effect of ionizing irradiation of post-larvae on subsequent survival and reproductive performance in the Kuruma shrimp, Penaeus (Marmpenaeus) japonicus (Bate). Aquaculture, 264 (1-4), 309-322. doi: 10.1016/j.aquaculture.2007.01.009 |
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2007 Journal Article Analysis of evolutionary, biogeographical and taxonomic patterns of nucleotide composition in demosponge rRNAErpenbeck, D., Cleary, D. F. R., Voigt, O., Nichols, S. A., Degnan, B. M., Hooper, J. N. A. and Worheide, G. (2007). Analysis of evolutionary, biogeographical and taxonomic patterns of nucleotide composition in demosponge rRNA. Journal of the Marine Biological Association of the United Kingdom, 87 (6), 1607-1614. doi: 10.1017/S0025315407058183 |
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2007 Journal Article Mitochondrial diversity of early-branching metazoa is revealed by the complete mt genome of a Haplosclerid DemospongeErpenbeck, D., Voigt, O., Adamski, M., Adamska, M., Hooper, J. N. A., Worheide, G. and Degnan, B. M. (2007). Mitochondrial diversity of early-branching metazoa is revealed by the complete mt genome of a Haplosclerid Demosponge. Molecular Biology and Evolution, 24 (1), 19-22. doi: 10.1093/molbev/msl154 |
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2007 Journal Article The evolutionary origin of hedgehog proteinsAdamska, M., Matus, D. Q., Adamski, M., Green, K., Rokhsar, D. S., Martindale, M. Q. and Degnan, B. M. (2007). The evolutionary origin of hedgehog proteins. Current Biology, 17 (19), R836-R837. doi: 10.1016/j.cub.2007.08.010 |
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2007 Journal Article Real-time RT-PCR quantification of Kuruma shrimp transcripts: A comparison of relative and absolute quantification proceduresSellars, M. J., Vuocolo, T., Leeton, L. A., Coman, G. J., Degnan, B. M. and Preston, N. P. (2007). Real-time RT-PCR quantification of Kuruma shrimp transcripts: A comparison of relative and absolute quantification procedures. Journal of Biotechnology, 129 (3), 391-399. doi: 10.1016/j.jbiotec.2007.01.029 |
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2007 Journal Article The systematics of Raspailiidae (Demospongiae: Poecilosclerida: Microcionina) re-analysed with a ribosomal markerErpenbeck, D., List-Armitage, S., Alvarez, B., Degnan, B. M., Worheide, G. and Hooper, J. N. A. (2007). The systematics of Raspailiidae (Demospongiae: Poecilosclerida: Microcionina) re-analysed with a ribosomal marker. Journal of the Marine Biological Association of the United Kingdom, 87 (6), 1571-1576. doi: 10.1017/S0025315407058201 |
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2007 Journal Article The NK homeobox gene cluster predates the origin of Hox genesLarroux, C., Fahey, B., Degnan, S. M., Adamski, M., Rokhsar, D. S. and Degnan, B. M. (2007). The NK homeobox gene cluster predates the origin of Hox genes. Current Biology, 17 (8), 706-710. doi: 10.1016/j.cub.2007.03.008 |
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2006 Journal Article The effect of larval age on morphology and gene expression during ascidian metamorphosisJacobs, Molly, Degnan, Sandie M., Woods, Rick, Williams, Elizabeth, Roper, Kathrein E., Green, Kathryn and Degnan, Bernard M. (2006). The effect of larval age on morphology and gene expression during ascidian metamorphosis. Integrative and Comparative Biology, 46 (6), 760-776. doi: 10.1093/icb/icl015 |
