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2011 Journal Article Modularity of gene-regulatory networks revealed in sea-star developmentMcDougall, Carmel and Degnan, Bernard M. (2011). Modularity of gene-regulatory networks revealed in sea-star development. BMC biology, 9 (1) 6, 6.1-6.3. doi: 10.1186/1741-7007-9-6 |
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2011 Journal Article NUMTs in the sponge genome reveal conserved transposition mechanisms in metazoansErpenbeck, D., Voigt, O., Adamski, M., Woodcroft, B. J., Hooper, J. N. A., Worheide, G. and Degnan, B. M. (2011). NUMTs in the sponge genome reveal conserved transposition mechanisms in metazoans. Molecular Biology and Evolution, 28 (1), 1-5. doi: 10.1093/molbev/msq217 |
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2010 Journal Article Developmental expression of COE across the Metazoa supports a conserved role in neuronal cell-type specification and mesodermal developmentJackson, Daniel J., Meyer, Neva P., Seaver, Elaine, Pang, Kevin, McDougall, Carmel, Moy, Vanessa N., Gordon, Kacy, Degnan, Bernard M., Martindale, Mark Q., Burke, Robert D. and Peterson, Kevin J. (2010). Developmental expression of COE across the Metazoa supports a conserved role in neuronal cell-type specification and mesodermal development. Development Genes and Evolution, 220 (7-8), 221-234. doi: 10.1007/s00427-010-0343-3 |
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2010 Journal Article Diversity of Mycobacterium species from marine sponges and their sensitivity to antagonism by sponge-derived rifamycin-synthesizing actinobacteria in genus SalinisporaIzumi, Hiroshi, Gauthier, Marie E.A., Degnan, Bernard M., Ng, Yi Kai, Hewavitharana, Amitha K., Shaw, P. Nicholas and Fuerst, John A. (2010). Diversity of Mycobacterium species from marine sponges and their sensitivity to antagonism by sponge-derived rifamycin-synthesizing actinobacteria in genus Salinispora. FEMS Microbiology Letters, 313 (1), 33-40. doi: 10.1111/j.1574-6968.2010.02118.x |
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2010 Journal Article Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shellMarie, Benjamin, Marie, Arul, Jackson, Daniel J., Dubost, Lionel, Degnan, Bernard, Milet, Christian and Marin, Frédéric (2010). Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shell. Proteome Science, 8 (1) 54. doi: 10.1186/1477-5956-8-54 |
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2010 Journal Article Expression of serotonin (5-HT) during CNS development of the cephalopod mollusk, Idiosepius notoidesWollesen, Tim, Degnan, Bernard M. and Wanninger, Andreas (2010). Expression of serotonin (5-HT) during CNS development of the cephalopod mollusk, Idiosepius notoides. Cell and Tissue Research, 342 (2), 161-178. doi: 10.1007/s00441-010-1051-z |
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2010 Journal Article Origin of animal epithelia: Insights from the sponge genomeFahey, Bryony and Degnan, Bernard M. (2010). Origin of animal epithelia: Insights from the sponge genome. Evolution and Development, 12 (6), 601-617. doi: 10.1111/j.1525-142X.2010.00445.x |
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2010 Journal Article Expression of sex and reproduction related genes in Marsupenaeus japonicusCallaghan, Tamera R., Degnan, Bernard M. and Sellars, Melony J. (2010). Expression of sex and reproduction related genes in Marsupenaeus japonicus. Marine Biotechnology, 12 (6), 664-667. doi: 10.1007/s10126-009-9254-6 |
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2010 Journal Article Protein evolution by molecular tinkering: Diversification of the nuclear receptor superfamily from a ligand-dependent ancestorBridgham, Jamie T., Eick, Geeta N., Larroux, Claire, Deshpande, Kirti, Harms, Michael J., Gauthier, Marie E. A., Ortlund,Eric A., Degnan, Bernard M. and Thornton, Joseph W. (2010). Protein evolution by molecular tinkering: Diversification of the nuclear receptor superfamily from a ligand-dependent ancestor. PLoS Biology, 8 (10) e1000497, e1000497.1-e1000497.13. doi: 10.1371/journal.pbio.1000497 |
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2010 Journal Article Sensory sea slugs: Towards decoding the molecular toolkit required for a mollusc to smellCummins, Scott F. and Degnan, Bernard M. (2010). Sensory sea slugs: Towards decoding the molecular toolkit required for a mollusc to smell. Communicative & Integrative Biology, 3 (5), 423-426. doi: 10.4161/cib.3.5.12091 |
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2010 Journal Article Structure and expression of conserved Wnt pathway components in the demosponge Amphimedon queenslandicaAdamska, Maja, Larroux, Claire, Adamski, Marcin, Green, Kathryn, Lovas, Erica, Koop, Demian, Richards, Gemma S., Zwafink, Christin and Degnan, Bernard M. (2010). Structure and expression of conserved Wnt pathway components in the demosponge Amphimedon queenslandica. Evolution and Development, 12 (5), 494-518. doi: 10.1111/j.1525-142X.2010.00435.x |
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2010 Journal Article The genome of the sponge Amphimedon queenslandica provides new perspectives into the origin of Toll-like and interleukin 1 receptor pathwaysGauthier, Marie E. A., Du Pasquier, Louis and Degnan, Bernard M. (2010). The genome of the sponge Amphimedon queenslandica provides new perspectives into the origin of Toll-like and interleukin 1 receptor pathways. Evolution and Development, 12 (5), 519-533. doi: 10.1111/j.1525-142X.2010.00436.x |
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2010 Journal Article The rise of genomics sheds light on the dawn of animalsDegnan, Bernard M. (2010). The rise of genomics sheds light on the dawn of animals. Evolution & Development, 12 (5), 425-427. doi: 10.1111/j.1525-142X.2010.00438.x |
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2010 Journal Article The Amphimedon queenslandica genome and the evolution of animal complexitySrivastava, Mansi, Simakov, Oleg, Chapman, Jarrod, Fahey, Bryony, Gauthier, Marie E. A., Mitros, Therese, Richards, Gemma S., Conaco, Cecilia, Dacre, Michael, Hellsten, Uffe, Larroux, Claire, Putnam, Nicholas H., Stanke, Mario, Adamska, Maja, Darling, Aaron, Degnan, Sandie M., Oakley, Todd H., Plachetzki, David C., Zhai, Yufeng F., Adamski, Marcin, Calcino, Andrew, Cummins, Scott F., Goodstein, David M., Harris, Christina, Jackson, Daniel J., Leys, Sally P., Shu, Shengqiang Q., Woodcroft, Ben J., Vervoort, Michel ... Rokhsar, Daniel S. (2010). The Amphimedon queenslandica genome and the evolution of animal complexity. Nature, 466 (7307), 720-726. doi: 10.1038/nature09201 |
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2010 Journal Article Nuclear-localized tiny RNAs are associated with transcription initiation and splice sites in metazoansTaft, Ryan, Simons, Cas, Nahkuri, Satu, Oey, Harald, Korbie, Darren J., Mercer, Timothy R., Holst, Jeff, Ritchie, William, Wong, Justin J-L., Rasko, John E. J., Rokhsar, Daniel S., Degnan, Bernard M. and Mattick, John S. (2010). Nuclear-localized tiny RNAs are associated with transcription initiation and splice sites in metazoans. Nature Structural and Molecular Biology, 17 (8), 1030-1035. doi: 10.1038/nsmb.1841 |
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2010 Journal Article Identifying the germline in an equally cleaving mollusc: Vasa and Nanos expression during embryonic and larval development of the vetigastropod Haliotis asininaKranz, Alexandrea M, Tollenaere, Alina, Norris, Belinda J., Degnan, Bernard M. and Degnan, Sandie M. (2010). Identifying the germline in an equally cleaving mollusc: Vasa and Nanos expression during embryonic and larval development of the vetigastropod Haliotis asinina. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution, 314B (4), 267-279. doi: 10.1002/jez.b.21336 |
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2010 Journal Article Evolutionary genomics of the Fox genes: Origin of gene families and the ancestry of gene clustersShimeld, Sebastian M., Degnan, Bernard M. and Luke, Graham N. (2010). Evolutionary genomics of the Fox genes: Origin of gene families and the ancestry of gene clusters. Genomics, 95 (5), 256-260. doi: 10.1016/j.ygeno.2009.08.002 |
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2010 Journal Article Male accessory gland protein reduces egg laying in a simultaneous hermaphroditeKoene, Joris M., Sloot, Wiebe, Montagne-Wajer, Kora, Cummins, Scott F., Degnan, Bernard M., Smith, John S., Nagle, Gregg T. and ter Maat, Andries (2010). Male accessory gland protein reduces egg laying in a simultaneous hermaphrodite. PLoS One, 5 (4) e10117, e10117. doi: 10.1371/journal.pone.0010117 |
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2010 Journal Article FMRFamide gene and peptide expression during central nervous system development of the cephalopod mollusk, Idiosepius notoidesWollesen, Tim, Cummins, Scott F., Degnan, Bernard M. and Wanninger, Andreas (2010). FMRFamide gene and peptide expression during central nervous system development of the cephalopod mollusk, Idiosepius notoides. Evolution and Development, 12 (2), 113-130. doi: 10.1111/j.1525-142X.2010.00398.x |
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2010 Journal Article Parallel evolution of nacre building gene sets in molluscsJackson, Daniel J., McDougall, Carmel, Woodcroft, Ben, Moase, Patrick, Rose, Robert A., Kube, Michael, Reinhardt, Richard, Rokhsar, Daniel S., Montagnani, Caroline, Joubert, Caroline, Piquemal, David and Degnan, Bernard M. (2010). Parallel evolution of nacre building gene sets in molluscs. Molecular Biology and Evolution, 27 (3), 591-608. doi: 10.1093/molbev/msp278 |
