Overview
Background
After receiving a PhD on immune regulation from La Sorbonne Universitas in France, Anne-Sophie joined Prof. Ian Frazer’s lab in Australia in 2010 where she led a highly successful and independent research program on the mechanisms of immune tolerance in human papillomavirus (HPV)-associated lesions in mice. She then joined the field of autoimmune diseases with Prof. Ranjeny Thomas in 2016. In Type 1 Diabetes (2016-2018), her pre-clinical data showed the feasibility of an antigen-specific liposome targeted immunotherapy in pre-diabetic mice and led to the first-in-human clinical trial using liposome nanoparticles.
Since 2019, her research program investigates how immune cells and microbes at mucosal barrier sites contribute to autoimmune and infection-associated disease in inflammatory arthritis, like Spondyloarthritis.
Her pre-clinical work has advanced the concept that the gut microbiome can influence autoimmune diseases affecting tissues outside the gut, including joints in inflammatory arthritis. Following up on this, her ongoing work aims to further understand how 1) gut bacteria-derived nanovesicles or BEVs may contribute to disease development, and 2) what pattern is presented to T cells and why T cells become pathogenic
Working towards translational research, her team is also establishing a humanised mouse model of psoriatic arthritis and rheumatoid arthritis to test alternative drugs, vehicles and biologics to treat arthritis in the context of human immune cells.
She is also working as a principal investigator in a pilot cohort study in synergy with Sanofi TSH at TRI, and clinicians at the Gold Coast precincts, to identify key immune biomarkers of Pelvic Inflammation Disease (PID) in individuals infected with Chlamydia trachomatis. This work aims to understand links between infection, pelvic inflammation disease and dysregulated immunity.
Availability
- Dr Anne-Sophie Bergot is:
- Available for supervision
Fields of research
Qualifications
- Doctor of Philosophy, Pierre and Marie Curie University
Research interests
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Uncovering how the immune system and microbial triggers drive inflammatory arthritis
My research program investigates how immune cells and microbes at mucosal barrier sites contribute to autoimmune and infection-associated disease in the joint. My pre-clinical work has advanced the concept that the gut microbiome can influence autoimmune diseases affecting tissues outside the gut, including joints in inflammatory arthritis. Following up on this, my ongoing work aims to further understand how 1) gut bacteria-derived nanovesicles or BEVs may contribute to disease development, and 2) what pattern is presented to T cells and why T cells become pathogenic Working towards translational research, my team is also establishing a humanised mouse model of psoriatic arthritis and rheumatoid arthritis to test alternative drugs, vehicles and biologics to treat arthritis in the context of human immune cells. I am also working as a principal investigator in a pilot cohort study in synergy with Sanofi TSH at TRI, and clinicians at the Gold Coast precincts, to identify key immune biomarkers of Pelvic Inflammation Disease (PID) in individuals infected with Chlamydia trachomatis. This work aims to understand links between infection, pelvic inflammation disease and dysregulated immunity.
Works
Search Professor Anne-Sophie Bergot’s works on UQ eSpace
2026
Journal Article
Intestinal sclerostin deficiency links gut dysbiosis to altered serotonin homeostasis in axial spondyloarthritis
Mauro, Daniele, Bergot, Anne-Sophie, Guggino, Giuliana, Salzillo, Alessia, Forte, Giulio, Ciancio, Antonio, Rizzo, Aroldo, Raimondo, Stefania, Lentini, Luca, Gandolfo, Saviana, Kim, Soohyun P., Wong, Chi, De Marino, Barbara, Milling, Simon, Alessandro, Riccardo, Panarese, Iacopo, Riddle, Ryan C., Zaiss, Mario M., Mcgonagle, Dennis, Thomas, Ranjeny and Ciccia, Francesco (2026). Intestinal sclerostin deficiency links gut dysbiosis to altered serotonin homeostasis in axial spondyloarthritis. Inflammation, 49 (1) 38. doi: 10.1007/s10753-025-02393-3
2026
Journal Article
Pathogenic OTUD3 mutations predispose to ulcerative colitis due to barrier dysfunction
Giri, Rabina, Lee, Minyi, Magor, Graham, Bergot, Anne-Sophie, He, Yaowu, Kryza, Thomas, Khan, Tashbib, Schreiber, Veronika, Gordon, Robert J., Zagani, Rachid, Hasnain, Sumaira Z., Lourie, Rohan, Ewing, Adam, Hooper, John D., Thomas, Ranjeny, Florin, Timothy H., Perkins, Andrew, Gala, Manish and Begun, Jakob (2026). Pathogenic OTUD3 mutations predispose to ulcerative colitis due to barrier dysfunction. Cellular and Molecular Gastroenterology and Hepatology, 20 (2) 101659, 1-20. doi: 10.1016/j.jcmgh.2025.101659
2025
Journal Article
Efficacy and safety of microbiota-targeted therapeutics in autoimmune and inflammatory rheumatic diseases: protocol for a systematic review and meta-analysis of randomised controlled trials
Kragsnaes, Maja Skov, Gilbert, Benoit Thomas P., Sofiudottir, Bjork Khaliqi, Rooney, Christopher Michael, Hansen, Sebrina Maj-Britt, Mauro, Daniele, Mullish, Benjamin H., Bergot, Anne-Sophie, Mankia, Kulveer Singh, Goel, Niti, Bakland, Gunnstein, Johnsen, Peter Holger, Miguens Blanco, Jesus, Li, Simone, Dumas, Emilie, Lage-Hansen, Philip Rask, Wagenaar, Carlijn, Bakdash, Ghaith, Robinson, Mat, Kristiansen, Karsten, Marchesi, Julian R., Schett, Georg, Zaiss, Mario M., Orlu, Mine, van Schaadenburg, Dirkjan, Scher, Jose U., Mcgonagle, Dennis, Elewaut, Dirk, Breban, Maxime ... Christensen, Robin (2025). Efficacy and safety of microbiota-targeted therapeutics in autoimmune and inflammatory rheumatic diseases: protocol for a systematic review and meta-analysis of randomised controlled trials. BMJ Open, 15 (12) e101593, 1-12. doi: 10.1136/bmjopen-2025-101593
2025
Journal Article
The role of the gut and intestinal dysbiosis in the pathogenesis of spondyloarthritis
Mauro, Daniele, Cai, Benjamin, Ciancio, Antonio, Forte, Giulio, Gandolfo, Saviana, Thomas, Ranjeny, Bergot, Anne-Sophie and Ciccia, Francesco (2025). The role of the gut and intestinal dysbiosis in the pathogenesis of spondyloarthritis. Joint Bone Spine, 92 (6) 105923, 1-6. doi: 10.1016/j.jbspin.2025.105923
2025
Conference Publication
Enrichment of putative bacteria-reactive gut-derived IL-17+tissue resident memory helper T cells in arthritic ankles in the SKG mouse model of spondyloarthritis
Cai, Benjamin, Soon, Megan, Tuong, Zewen Kelvin, Morrison, Mark, Bergot, Anne-Sophie and Thomas, Ranjeny (2025). Enrichment of putative bacteria-reactive gut-derived IL-17+tissue resident memory helper T cells in arthritic ankles in the SKG mouse model of spondyloarthritis. ACR Convergence 2025, Chicago, IL, United States, 24 – 29 October 2025. Hoboken, NJ, United States: John Wiley & Sons. doi: 10.1002/art.43421
2025
Journal Article
Pro-inflammatory macrophages transporting gut-derived bacterial DNA drive autoimmune arthritis in spondyloarthropathy
Cai, Benjamin, Giri, Rabina, Cameron, Amy J., Rahman, M. Arifur, Small, Annabelle, Altmann, Christopher, Lim, Yenkai, Rehaume, Linda M., Morrison, Mark, Wechalekar, Mihir D., Begun, Jakob, Bergot, Anne-Sophie and Thomas, Ranjeny (2025). Pro-inflammatory macrophages transporting gut-derived bacterial DNA drive autoimmune arthritis in spondyloarthropathy. JCI Insight, 10 (17) e188028, 1-19. doi: 10.1172/jci.insight.188028
2025
Journal Article
Interaction between haploinsufficiency of PTPN2 and patient microbiome promotes autoimmune arthritis in mice
Sendo, Sho, Vela, Allison J., Ro, Myungja, Thiruppathy, Deepan, Wilkinson, Elizabeth L., Zhao, Zixuan, Hsieh, Wan-Chen, Yang, Shen, Coras, Roxana, Bergot, Anne-Sophie, Guma, Monica, Nguyen, Anders, McBride, David A., Devkota, Suzanne, Thomas, Ranjeny, Shah, Nisarg J., Svensson, Mattias N.D., Zengler, Karsten, Stanford, Stephanie M. and Bottini, Nunzio (2025). Interaction between haploinsufficiency of PTPN2 and patient microbiome promotes autoimmune arthritis in mice. Journal of Autoimmunity, 156 103452. doi: 10.1016/j.jaut.2025.103452
2025
Journal Article
PD‐1 expressing islet‐specific CD4+ T cells promote bystander tolerance and prevent autoimmunity
Loaiza Naranjo, Jeniffer D., Zhang, Vivian, Ravichandran, Rathna, Bergot, Anne‐Sophie, Thomas, Ranjeny and Hamilton‐Williams, Emma E. (2025). PD‐1 expressing islet‐specific CD4+ T cells promote bystander tolerance and prevent autoimmunity. Immunology and Cell Biology, 103 (7) imcb., 738-751. doi: 10.1111/imcb.70044
2024
Conference Publication
Self or Bacteria-reactive Th17 Expand from Conventional and Regulatory T Cells in Parabacteroides Goldsteinii Gnotobiotic Arthritic SKG Mice, in Context of Interferon-driven Synovial Inflammatory Macrophages and Reduced Bacterial Immune Regulation
Cai, Benjamin, Tuong, Zewen Kelvin, Morrison, Mark, Bergot, Anne-Sophie and Thomas, Ranjeny (2024). Self or Bacteria-reactive Th17 Expand from Conventional and Regulatory T Cells in Parabacteroides Goldsteinii Gnotobiotic Arthritic SKG Mice, in Context of Interferon-driven Synovial Inflammatory Macrophages and Reduced Bacterial Immune Regulation. ACR Convergence 2024, Washington, DC United States, 15–19 November 2024. Hoboken, NJ United States: John Wiley & Sons.
2024
Conference Publication
Unveiling the uterine-joint axis: dysbiosis and subclinical uterine inflammation in female axial spondyloarthritis pathogenesis
Mauro, Daniele, Vecellio, Matteo, Bergot, Anne-Sophie, Schmid, Eva, Forte, Giulio, Stingo, Alessia, Salzillo, Alessia, Pastore, Aldo, Aretini, Paolo, Di Lorenzo, Francesca, Ciancio, Antonio, Pantano, Ilenia, Saccone, Gabriele, Zullo, Fulvio, Montecucco, Carlo Maurizio, Rizzo, Aroldo, Schett, Georg, Thomas, Ranjeny, Zaiss, Mario and Ciccia, Francesco (2024). Unveiling the uterine-joint axis: dysbiosis and subclinical uterine inflammation in female axial spondyloarthritis pathogenesis. ACR Convergence: where rheumatology meets, Washington, DC, United States, 14 - 19 November 2024. Hoboken, NJ, United States: John Wiley & Sons.
2024
Conference Publication
Type 3 cytokine blockade in translocation of instestinal bacteria in spondyloarthropathy
Cai, B., Giri, R., Benham, H., Rehaume, L., Strutton, G., Bergot, A. S. and Thomas, R. (2024). Type 3 cytokine blockade in translocation of instestinal bacteria in spondyloarthropathy. EULAR 2024 European Congress of Rheumatology, Vienna, Austria, 12-15 June 2024. London, United Kingdom: BMJ Group. doi: 10.1136/annrheumdis-2024-eular.2408
2024
Conference Publication
Crossing the barriers: dysbiosis and subclinical uterine inflammation in the pathogenesis of AxSpA in females. Another break in the wall?
Mauro, D., Vecellio, M., Schmid, E., Bergot, A. S., Forte, G., Stingo, A., Salzillo, A., Pastore, A., Aretini, P., Ciancio, A., Pantano, I., Saccone, G., Zullo, F., Montecucco, C., Rizzo, A., Schett, G., Thomas, R., Zaiss, M. M. and Ciccia, F. (2024). Crossing the barriers: dysbiosis and subclinical uterine inflammation in the pathogenesis of AxSpA in females. Another break in the wall?. EULAR 2024 European Congress of Rheumatology, Vienna, Austria, 12 - 15 June 2024. New York, NY United States: Oxford University Press. doi: 10.1136/annrheumdis-2024-eular.4993
2024
Conference Publication
Intestinal neuroinflammation in spa is correlated with dysbiosis
Forte, G., Mauro, D., Bergot, A. S., Cameron, A., Ciancio, A., Scalise, G., Salzillo, A., Pantano, I., Panarese, I., Vespere, G., De Luca, L., Desena, G., Napolitano, V., Franco, R., Provitera, V., Thomas, R. and Ciccia, F. (2024). Intestinal neuroinflammation in spa is correlated with dysbiosis. EULAR 2024 European Congress of Rheumatology, Vienna, Austria, 12 - 15 June 2024. London, United Kingdom: BMJ Group. doi: 10.1136/annrheumdis-2024-eular.5422
2024
Conference Publication
Intestinal neuroinflammation is associated with subclinical gut inflammation and dysbiosis in spondyloarthritis
Mauro, D., Ciancio, A., Forte, G., Bergot, A. S., Cameron, A., Scalise, G., Salzillo, A., Glatigny, S., Pantano,, Panarese, J., Vespere, G., de Sena, G., Napolitano,, Franco, R., Provitera,, Breban, M., Thomas, R. and Ciccia, F. (2024). Intestinal neuroinflammation is associated with subclinical gut inflammation and dysbiosis in spondyloarthritis. Pisa, Italy: Clinical and Experimental Rheumatology.
2024
Conference Publication
Uterus dysbiosis and subclinical uterine inflammation are involved in the pathogenesis of female spondyloarthritis
Mauro, D., Vecellio, M., Bergot, A. S., Schmid, E., Forte, G., Stingo, A., Salzil-Lo, A., Pastore, A., Aretini, P., Di Lorenzo, F., Ciancio, A., Pantano,, Saccone, G., Zullo, F., Montecucco, C. M., Rizzo, A., Schett, G., Thomas, R., Zaiss, M. M. and Ciccia, F. (2024). Uterus dysbiosis and subclinical uterine inflammation are involved in the pathogenesis of female spondyloarthritis. Pisa, Italy: Clinical and Experimental Rheumatology.
2023
Conference Publication
Translocation of intestinal bacteria to axial and peripheral joints in a model of spondyloarthropathy
Cai, Benjamin, Giri, Rabina, Benham, Helen, Rehaume, Linda, Strutton, Geoffery, Bergot, Anne-Sophie and Thomas, Ranjeny (2023). Translocation of intestinal bacteria to axial and peripheral joints in a model of spondyloarthropathy. ACR Convergence 2023, San Diego, CA, United States, 10 - 15 November 2023. Hoboken, NJ, United States: John Wiley & Sons.
2023
Conference Publication
Goblet cell specific anti-apoptotic role of interleukin-24 in spondyloarthritis-associated ileitis
Cameron, Amy, Giri, Rabina, Begun, Jakob, Wells, Timothy, Thomas, Ranjeny and Bergot, Anne-Sophie (2023). Goblet cell specific anti-apoptotic role of interleukin-24 in spondyloarthritis-associated ileitis. ACR Convergence 2023, San Diego, CA, United States, 10 - 15 November 2023. Hoboken, NJ, United States: John Wiley & Sons.
2023
Conference Publication
Goblet cell specific anti-apoptotic role of interleukin-24 in spondyloarthritis-associated ileitis
Cameron, A., Giri, R., Begun, J., Wells, T., Bergot, A. S. and Thomas, R. (2023). Goblet cell specific anti-apoptotic role of interleukin-24 in spondyloarthritis-associated ileitis. EULAR 2023 European Congress of Rheumatology, Milan, Italy, 31 May-3 June 2023. London, United Kingdom: BMJ Group. doi: 10.1136/annrheumdis-2023-eular.1346
2023
Conference Publication
The interplay of IL-23, probiotic and pathobiont bacteria in the pathogenesis of ileitis and spondyloarthritis in the SKG mouse model
Bergot, Anne-Sophie, Cai, Benjamin, Giri, Rabina, Cameron, Amy, Duggan, Emily, Lim, Kai, Rehaume, Linda, Morrison, Mark, Begun, Jakob and Thomas, Ranjeny (2023). The interplay of IL-23, probiotic and pathobiont bacteria in the pathogenesis of ileitis and spondyloarthritis in the SKG mouse model. 2023 Australian Rheumatology Association (ARA) 63rd Annual Scientific Meeting, Hobart, TAS, Australia, 6–9 May 2023. Hoboken, NJ, United States: Wiley.
2023
Journal Article
Genetically encoded Runx3 and CD4+ intestinal epithelial lymphocyte deficiencies link SKG mouse and human predisposition to spondyloarthropathy
Bhuyan, Zaied Ahmed, Rahman, M. Arifur, Maradana, Muralidhara Rao, Mehdi, Ahmed M., Bergot, Anne-Sophie, Simone, Davide, El-Kurdi, Marya, Garrido-Mesa, Jose, Cai, Cheng Bang Benjamin, Cameron, Amy J., Hanson, Aimee L., Nel, Hendrik J., Kenna, Tony, Leo, Paul, Rehaume, Linda, Brown, Matthew A., Ciccia, Francesco and Thomas, Ranjeny (2023). Genetically encoded Runx3 and CD4+ intestinal epithelial lymphocyte deficiencies link SKG mouse and human predisposition to spondyloarthropathy. Clinical Immunology, 247 109220, 1-14. doi: 10.1016/j.clim.2022.109220
Supervision
Availability
- Dr Anne-Sophie Bergot is:
- Available for supervision
Looking for a supervisor? Read our advice on how to choose a supervisor.
Supervision history
Current supervision
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Doctor Philosophy
Restoration of regulatory T cell responses in type 1 diabetes
Associate Advisor
Other advisors: Dr Janin Chandra, Professor Emma Hamilton-Williams, Dr Jennifer Smith
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Doctor Philosophy
Translation of an antigen-specific immunotherapy platform for management of psoriatic arthritis
Associate Advisor
Other advisors: Professor Ranjeny Thomas
-
Doctor Philosophy
The interplay of myeloid cells and autoreactive T lymphocytes activated by gut-derived bacteria in spondyloarthropathy
Associate Advisor
Other advisors: Professor Mark Morrison, Professor Ranjeny Thomas
Completed supervision
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2025
Doctor Philosophy
The Role of Endoplasmic Reticulum Stress in Autoimmune Inflammatory Arthritis
Principal Advisor
Other advisors: Professor Ranjeny Thomas, Associate Professor Timothy Wells
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2023
Doctor Philosophy
Nanoparticle delivery systems for antigen-specific immunotherapy in type 1 diabetes
Associate Advisor
Other advisors: Professor Ranjeny Thomas, Professor Emma Hamilton-Williams
Media
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