
Overview
Background
Dr Clark is a Senior Lecturer at the School of Biomedical Sciences where he is Head of the Peptide Chemical Biology Lab. He completed his PhD in 2000 at the UQ Chemistry Department studying marine natural products chemistry and chemical ecology with Prof. Mary Garson. He then shifted his research focus towards peptide chemistry, structural biology and drug design when he was recruited to the lab of Prof. David Craik at the IMB. His current research focus is the development of technologies to stabilise peptide therapeutics and the elucidation of the structure/function activity of bioactive peptides.
Availability
- Associate Professor Richard Clark is:
- Available for supervision
Fields of research
Qualifications
- Bachelor (Honours) of Science (Advanced), University of Tasmania
- Doctor of Philosophy, The University of Queensland
Works
Search Professor Richard Clark’s works on UQ eSpace
2019
Journal Article
Periplasmic expression of 4/7 alpha-conotoxin TxIA analogs in E. coli favors ribbon isomer formation suggestion of a binding mode at the α7 nAChR
El Hamdaoui, Yamina, Wu, Xiaosa, Clark, Richard J., Giribaldi, Julien, Anangi, Raveendra, Craik, David J., King, Glenn F., Dutertre, Sebastien, Kaas, Quentin, Herzig, Volker and Nicke, Annette (2019). Periplasmic expression of 4/7 alpha-conotoxin TxIA analogs in E. coli favors ribbon isomer formation suggestion of a binding mode at the α7 nAChR. Frontiers in Pharmacology, 10 (MAY) 577, 577. doi: 10.3389/fphar.2019.00577
2018
Journal Article
Discovery of peptide probes to modulate oxytocin-type receptors of insects
Keov, Peter, Liutkevičiūtė, Zita, Hellinger, Roland, Clark, Richard J. and Gruber, Christian W. (2018). Discovery of peptide probes to modulate oxytocin-type receptors of insects. Scientific reports, 8 (1) 10020, 10020. doi: 10.1038/s41598-018-28380-3
2018
Journal Article
Structure-activity studies reveal the molecular basis for GABAB-receptor mediated inhibition of high voltage-activated calcium channels by α-conotoxin Vc1.1
Sadeghi, Mahsa, Carstens, Bodil B., Callaghan, Brid P., Daniel, James T., Tae, Han Shen, O'Donnell, Tracey, Castro, Joel, Brierley, Stuart M., Adams, David J., Craik, David J. and Clark, Richard J. (2018). Structure-activity studies reveal the molecular basis for GABAB-receptor mediated inhibition of high voltage-activated calcium channels by α-conotoxin Vc1.1. ACS Chemical Biology, 13 (6), 1577-1587. doi: 10.1021/acschembio.8b00190
2018
Journal Article
Development and validation of a LC-MS/MS assay for pharmacokinetic studies of complement C5a receptor antagonists PMX53 and PMX205 in mice
Kumar, Vinod, Lee, John D., Clark, Richard J. and Woodruff, Trent M. (2018). Development and validation of a LC-MS/MS assay for pharmacokinetic studies of complement C5a receptor antagonists PMX53 and PMX205 in mice. Scientific Reports, 8 (1) 8101, 8101. doi: 10.1038/s41598-018-26387-4
2018
Journal Article
Peptide mimic for influenza vaccination using nonnatural combinatorial chemistry
Miles, John J., Tan, Mai Ping, Dolton, Garry, Edwards, Emily S. J., Galloway, Sarah A. E., Laugel, Bruno, Clement, Mathew, Makinde, Julia, Ladell, Kristin, Matthews, Katherine K., Watkins, Thomas S., Tungatt, Katie, Wong, Yide, Lee, Han Siean, Clark, Richard J., Pentier, Johanne M., Attaf, Meriem, Lissina, Anya, Ager, Ann, Gallimore, Awen, Rizkallah, Pierre J., Gras, Stephanie, Rossjohn, Jamie, Burrows, Scott R., Cole, David K., Price, David A. and Sewell, Andrew K. (2018). Peptide mimic for influenza vaccination using nonnatural combinatorial chemistry. Journal of Clinical Investigation, 128 (4), 1569-1580. doi: 10.1172/JCI91512
2018
Journal Article
Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus
Rodriguez-Valle, Manuel, Moolhuijzen, Paula, Barrero, Roberto A., Ong, Chian Teng, Busch, Greta, Karbanowicz, Thomas, Booth, Mitchell, Clark, Richard, Koehbach, Johannes, Ijaz, Hina, Broady, Kevin, Agnew, Kim, Knowles, Aleta G., Bellgard, Matthew I. and Tabor, Ala E. (2018). Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus. International Journal for Parasitology, 48 (1), 71-82. doi: 10.1016/j.ijpara.2017.07.007
2017
Journal Article
G-Protein Coupled Receptors Targeted by Analgesic Venom Peptides
Daniel, James T. and Clark, Richard J. (2017). G-Protein Coupled Receptors Targeted by Analgesic Venom Peptides. Toxins, 9 (11) 372, 1-26. doi: 10.3390/toxins9110372
2017
Journal Article
Helminth immunomodulation in autoimmune disease
Smallwood, Taylor B., Giacomin, Paul R., Loukas, Alex, Mulvenna, Jason P., Clark, Richard J. and Miles, John J. (2017). Helminth immunomodulation in autoimmune disease. Frontiers in Immunology, 8 (APR) 453, 453. doi: 10.3389/fimmu.2017.00453
2017
Conference Publication
Motor neuron disease proteins activate complement and generate C5a
Deora, Vandana, Mantovani, Susanna, Yerbury, Justin, Clark, Richard, Atkin, Julie, Lee, John, Gordon, Richard and Woodruff, Trent M. (2017). Motor neuron disease proteins activate complement and generate C5a. 16th European Meeting on Complement in Human Disease (EMCHD), Copenhagen, Denmark, 8-12 September 2017. Kidlington, Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.molimm.2017.06.144
2017
Book Chapter
Molecular engineering of Conus peptides as therapeutic leads
Daniel, James T. and Clark, Richard J. (2017). Molecular engineering of Conus peptides as therapeutic leads. Peptides and peptide-based biomaterials and their biomedical applications. (pp. 229-254) edited by Anwar Sunna, Andrew Care and Peter L. Bergquist. Cham, Switzerland: Springer. doi: 10.1007/978-3-319-66095-0_10
2016
Journal Article
Effects of linker sequence modifications on the structure, stability and biological activity of a cyclic α-conotoxin
Carstens, Bodil B., Swedberg, Joakim, Berecki, Geza, Adams, David J., Craik, David J. and Clark, Richard J. (2016). Effects of linker sequence modifications on the structure, stability and biological activity of a cyclic α-conotoxin. Biopolymers, 106 (6), 864-875. doi: 10.1002/bip.22848
2016
Journal Article
Unveiling the diversity of cyclotides by combining peptidome and transcriptome analysis
Koehbach, Johannes and Clark, Richard J. (2016). Unveiling the diversity of cyclotides by combining peptidome and transcriptome analysis. Biopolymers, 106 (6), 774-783. doi: 10.1002/bip.22858
2016
Journal Article
Release of bioactive peptides from polyurethane films in vitro and in vivo: Effect of polymer composition
Zhang, Jing, Woodruff, Trent M., Clark, Richard J., Martin, Darren J. and Minchin, Rodney F. (2016). Release of bioactive peptides from polyurethane films in vitro and in vivo: Effect of polymer composition. Acta Biomaterialia, 41, 264-272. doi: 10.1016/j.actbio.2016.05.034
2016
Journal Article
Discovery of functionally selective C5aR2 ligands: novel modulators of C5a signalling
Croker, Daniel E., Monk, Peter N., Halai, Reena, Kaeslin, Geraldine, Schofield, Zoe, Wu, Mike C. L., Clark, Richard J., Blaskovich, Mark A. T., Morikis, Dimitrios, Floudas, Christodoulos A., Cooper, Matthew and Woodruff, Trent M. (2016). Discovery of functionally selective C5aR2 ligands: novel modulators of C5a signalling. Immunology and Cell Biology, 94 (8), 787-795. doi: 10.1038/icb.2016.43
2016
Journal Article
The N-terminal pro-domain of the kalata B1 cyclotide precursor is intrinsically unstructured
Daly, Norelle L., Gunasekera, Sunithi, Clark, Richard J., Lin, Feng, Wade, John D., Anderson, Marilyn and Craik, David J. (2016). The N-terminal pro-domain of the kalata B1 cyclotide precursor is intrinsically unstructured. Biopolymers, 106 (6), 825-833. doi: 10.1002/bip.22977
2016
Journal Article
Tick holocyclotoxins trigger host paralysis by presynaptic inhibition
Chand, Kirat K., Lee, Kah Meng, Lavidis, Nickolas A., Rodriguez-Valle, Manuel, Ijaz, Hina, Koehbach, Johannes, Clark, Richard J., Lew-Tabor, Ala and Noakes, Peter G. (2016). Tick holocyclotoxins trigger host paralysis by presynaptic inhibition. Scientific Reports, 6 (1) 29446, 29446. doi: 10.1038/srep29446
2016
Journal Article
Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High-Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif
Carstens, Bodil B., Berecki, Géza, Daniel, James T., Lee, Han Siean, Jackson, Kathryn A. V., Tae, Han-Shen, Sadeghi, Mahsa, Castro, Joel, O'Donnell, Tracy, Deiteren, Annemie, Brierley, Stuart M., Craik, David J., Adams, David J. and Clark, Richard J. (2016). Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High-Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif. Angewandte Chemie, 128 (15), 4770-4774. doi: 10.1002/ange.201600297
2016
Conference Publication
Pharmacological Characterisation of the Cyclotide Kalata B7 At Insect Orthologues of the Oxytocin/vasopressin Receptors
Keov, P., Liutkeviciute, Z., Clark, R. and Gruber, C. (2016). Pharmacological Characterisation of the Cyclotide Kalata B7 At Insect Orthologues of the Oxytocin/vasopressin Receptors. HOBOKEN: WILEY.
2016
Journal Article
Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif
Carstens, Bodil B., Berecki, Geza, Daniel, James T., Lee, Han Siean, Jackson, Kathryn A. V., Tae, Han-Shen, Sadeghi, Mahsa, Castro, Joel, O'Donnell, Tracy, Deiteren, Annemie, Brierley, Stuart M., Craik, David J., Adams, David J. and Clark, Richard J. (2016). Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif. Angewandte Chemie - International Edition, 55 (15), 4692-4696. doi: 10.1002/anie.201600297
2016
Conference Publication
Development of peptide therapeutics for iron disorders
Goncalves, Daniela, Rishi, Gautam, Aliyanto, Randy, Rosengren, Johan, Subramaniam, Nathan, Frazer, David and Clark, Richard (2016). Development of peptide therapeutics for iron disorders. 6th Meeting of the International BioIron Society, Zhejiang University, Hangzhou, China, 8-10 September 2015. Hoboken, NJ, United States: John Wiley & Sons.
Funding
Current funding
Past funding
Supervision
Availability
- Associate Professor Richard Clark is:
- Available for supervision
Before you email them, read our advice on how to contact a supervisor.
Available projects
-
Designing novel conotoxins with therapeutic potential
Conotoxins, with their exquisite specificity and potency have recently created much excitement as drug leads for the treatment of chronic pain. For example, the conotoxin MVIIA (also known as Ziconotide or Prialt) has been approved for use in the U.S. and Europe for the treatment of pain and several other conotoxins have entered clinical trials. In addition, a number of conotoxins have played a critical role in dissecting the molecular mechanisms of ion channel and transporter functions in the nervous system.
There are projects available in the design of novel conotoxins that target specific receptors involved in pain.
-
Development of stable peptide-based drugs for the treatment of iron disorders
Hepcidin is the principal iron-regulatory hormone and the key mediator of iron overload (haemochromatosis) and anaemia of inflammation. This research project involves two development streams of peptide design, synthesis and structure/function analysis. The first stream will focus on the specific residues important for biological activity of hepcidin and the mutation of these residues to improve activity. The second stream will involve the development of stabilised analogues of native hepcidin. The two streams will coalesce during the final round of development to produce a series of novel cyclic hepcidin drug leads.
Supervision history
Current supervision
-
Doctor Philosophy
Making peptide drugs orally bioavailable
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
Doctor Philosophy
Design and development of peptide ligands targeting the complement system
Principal Advisor
Other advisors: Professor Trent Woodruff
-
Doctor Philosophy
Novel long-acting and orally delivered conotoxin-based peptides with both analgesic efficacy and disease modifying potential
Associate Advisor
Other advisors: Dr Andy Kuo, Emeritus Professor Maree Smith
-
Doctor Philosophy
Preclinical evaluation of complement receptor targeted drugs for neurological disease
Associate Advisor
Other advisors: Dr John Lee, Dr Vinod Kumar, Professor Trent Woodruff
Completed supervision
-
2022
Doctor Philosophy
Design and Development of Peptides Targeting the C5a-C5aR Interaction
Principal Advisor
Other advisors: Professor Trent Woodruff, Associate Professor Johan Rosengren
-
2020
Doctor Philosophy
Development of miniaturised alpha-conotoxins for the treatment of pain
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
2019
Doctor Philosophy
Mining helminth secretions for new classes of immune suppressing drugs
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
2018
Doctor Philosophy
Development of Peptide Therapeutics for Iron Disorders
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
2014
Doctor Philosophy
Marine natural wonders and the beginning of their journey towards the pharmaceutical market
Principal Advisor
Other advisors: Professor David Craik
-
2024
Master Philosophy
The Structural and Functional Role of Post-translational Modification in the µ-Conotoxins
Associate Advisor
Other advisors: Dr Anne Conibear, Associate Professor Johan Rosengren
-
2024
Doctor Philosophy
A novel cyclic peptide scaffold for drug design applications
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2022
Doctor Philosophy
Structural Studies of Peptides Buried within Seed Storage Proteins
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2022
Doctor Philosophy
Preclinical development of complement C5aR1 antagonists for the treatment of inflammatory bowel disease
Associate Advisor
Other advisors: Dr John Lee, Dr Vinod Kumar, Dr Felicity Han, Professor Trent Woodruff
-
2021
Doctor Philosophy
Investigating the Immunopharmacology of the Complement C5a Receptors, C5aR1 and C5aR2
Associate Advisor
Other advisors: Dr John Lee, Professor Mark Blaskovich, Professor Trent Woodruff
-
2020
Doctor Philosophy
Targeting of relaxin-3 analogues to the brain for pharmacological modulation of neurosignalling
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2019
Doctor Philosophy
Expanding the Structural Atlas of Peptide Toxins
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2017
Doctor Philosophy
Structural insights into cyclic plant peptides and their albumin precursors
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2015
Doctor Philosophy
The Science and Business of Novel Therapeutics: The Need for a Complete Picture
Associate Advisor
Other advisors: Professor Damian Hine, Professor David Craik
-
2012
Doctor Philosophy
PEPLINK: A Fragment-Based Method for Screening Peptides as Drug Leads
Associate Advisor
Other advisors: Professor David Craik
-
2011
Doctor Philosophy
Design and discovery of cyclic peptides with applications in drug development
Associate Advisor
Other advisors: Professor David Craik
-
2010
Doctor Philosophy
The story of a-conotoxins, Vc1.1 and RgIA, on their journey to becoming therapeutics
Associate Advisor
Other advisors: Professor David Craik
Media
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