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Associate Professor Richard Clark
Associate Professor

Richard Clark

Email: 
Phone: 
+61 7 336 51527

Overview

Background

Dr Clark is a Senior Lecturer at the School of Biomedical Sciences where he is Head of the Peptide Chemical Biology Lab. He completed his PhD in 2000 at the UQ Chemistry Department studying marine natural products chemistry and chemical ecology with Prof. Mary Garson. He then shifted his research focus towards peptide chemistry, structural biology and drug design when he was recruited to the lab of Prof. David Craik at the IMB. His current research focus is the development of technologies to stabilise peptide therapeutics and the elucidation of the structure/function activity of bioactive peptides.

Availability

Associate Professor Richard Clark is:
Available for supervision

Qualifications

  • Bachelor (Honours) of Science (Advanced), University of Tasmania
  • Doctor of Philosophy, The University of Queensland

Works

Search Professor Richard Clark’s works on UQ eSpace

163 works between 1998 and 2024

41 - 60 of 163 works

2019

Journal Article

Periplasmic expression of 4/7 alpha-conotoxin TxIA analogs in E. coli favors ribbon isomer formation suggestion of a binding mode at the α7 nAChR

El Hamdaoui, Yamina, Wu, Xiaosa, Clark, Richard J., Giribaldi, Julien, Anangi, Raveendra, Craik, David J., King, Glenn F., Dutertre, Sebastien, Kaas, Quentin, Herzig, Volker and Nicke, Annette (2019). Periplasmic expression of 4/7 alpha-conotoxin TxIA analogs in E. coli favors ribbon isomer formation suggestion of a binding mode at the α7 nAChR. Frontiers in Pharmacology, 10 (MAY) 577, 577. doi: 10.3389/fphar.2019.00577

Periplasmic expression of 4/7 alpha-conotoxin TxIA analogs in E. coli favors ribbon isomer formation suggestion of a binding mode at the α7 nAChR

2018

Journal Article

Discovery of peptide probes to modulate oxytocin-type receptors of insects

Keov, Peter, Liutkevičiūtė, Zita, Hellinger, Roland, Clark, Richard J. and Gruber, Christian W. (2018). Discovery of peptide probes to modulate oxytocin-type receptors of insects. Scientific reports, 8 (1) 10020, 10020. doi: 10.1038/s41598-018-28380-3

Discovery of peptide probes to modulate oxytocin-type receptors of insects

2018

Journal Article

Structure-activity studies reveal the molecular basis for GABAB-receptor mediated inhibition of high voltage-activated calcium channels by α-conotoxin Vc1.1

Sadeghi, Mahsa, Carstens, Bodil B., Callaghan, Brid P., Daniel, James T., Tae, Han Shen, O'Donnell, Tracey, Castro, Joel, Brierley, Stuart M., Adams, David J., Craik, David J. and Clark, Richard J. (2018). Structure-activity studies reveal the molecular basis for GABAB-receptor mediated inhibition of high voltage-activated calcium channels by α-conotoxin Vc1.1. ACS Chemical Biology, 13 (6), 1577-1587. doi: 10.1021/acschembio.8b00190

Structure-activity studies reveal the molecular basis for GABAB-receptor mediated inhibition of high voltage-activated calcium channels by α-conotoxin Vc1.1

2018

Journal Article

Development and validation of a LC-MS/MS assay for pharmacokinetic studies of complement C5a receptor antagonists PMX53 and PMX205 in mice

Kumar, Vinod, Lee, John D., Clark, Richard J. and Woodruff, Trent M. (2018). Development and validation of a LC-MS/MS assay for pharmacokinetic studies of complement C5a receptor antagonists PMX53 and PMX205 in mice. Scientific Reports, 8 (1) 8101, 8101. doi: 10.1038/s41598-018-26387-4

Development and validation of a LC-MS/MS assay for pharmacokinetic studies of complement C5a receptor antagonists PMX53 and PMX205 in mice

2018

Journal Article

Peptide mimic for influenza vaccination using nonnatural combinatorial chemistry

Miles, John J., Tan, Mai Ping, Dolton, Garry, Edwards, Emily S. J., Galloway, Sarah A. E., Laugel, Bruno, Clement, Mathew, Makinde, Julia, Ladell, Kristin, Matthews, Katherine K., Watkins, Thomas S., Tungatt, Katie, Wong, Yide, Lee, Han Siean, Clark, Richard J., Pentier, Johanne M., Attaf, Meriem, Lissina, Anya, Ager, Ann, Gallimore, Awen, Rizkallah, Pierre J., Gras, Stephanie, Rossjohn, Jamie, Burrows, Scott R., Cole, David K., Price, David A. and Sewell, Andrew K. (2018). Peptide mimic for influenza vaccination using nonnatural combinatorial chemistry. Journal of Clinical Investigation, 128 (4), 1569-1580. doi: 10.1172/JCI91512

Peptide mimic for influenza vaccination using nonnatural combinatorial chemistry

2018

Journal Article

Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus

Rodriguez-Valle, Manuel, Moolhuijzen, Paula, Barrero, Roberto A., Ong, Chian Teng, Busch, Greta, Karbanowicz, Thomas, Booth, Mitchell, Clark, Richard, Koehbach, Johannes, Ijaz, Hina, Broady, Kevin, Agnew, Kim, Knowles, Aleta G., Bellgard, Matthew I. and Tabor, Ala E. (2018). Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus. International Journal for Parasitology, 48 (1), 71-82. doi: 10.1016/j.ijpara.2017.07.007

Transcriptome and toxin family analysis of the paralysis tick, Ixodes holocyclus

2017

Journal Article

G-Protein Coupled Receptors Targeted by Analgesic Venom Peptides

Daniel, James T. and Clark, Richard J. (2017). G-Protein Coupled Receptors Targeted by Analgesic Venom Peptides. Toxins, 9 (11) 372, 1-26. doi: 10.3390/toxins9110372

G-Protein Coupled Receptors Targeted by Analgesic Venom Peptides

2017

Journal Article

Helminth immunomodulation in autoimmune disease

Smallwood, Taylor B., Giacomin, Paul R., Loukas, Alex, Mulvenna, Jason P., Clark, Richard J. and Miles, John J. (2017). Helminth immunomodulation in autoimmune disease. Frontiers in Immunology, 8 (APR) 453, 453. doi: 10.3389/fimmu.2017.00453

Helminth immunomodulation in autoimmune disease

2017

Conference Publication

Motor neuron disease proteins activate complement and generate C5a

Deora, Vandana, Mantovani, Susanna, Yerbury, Justin, Clark, Richard, Atkin, Julie, Lee, John, Gordon, Richard and Woodruff, Trent M. (2017). Motor neuron disease proteins activate complement and generate C5a. 16th European Meeting on Complement in Human Disease (EMCHD), Copenhagen, Denmark, 8-12 September 2017. Kidlington, Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.molimm.2017.06.144

Motor neuron disease proteins activate complement and generate C5a

2017

Book Chapter

Molecular engineering of Conus peptides as therapeutic leads

Daniel, James T. and Clark, Richard J. (2017). Molecular engineering of Conus peptides as therapeutic leads. Peptides and peptide-based biomaterials and their biomedical applications. (pp. 229-254) edited by Anwar Sunna, Andrew Care and Peter L. Bergquist. Cham, Switzerland: Springer. doi: 10.1007/978-3-319-66095-0_10

Molecular engineering of Conus peptides as therapeutic leads

2016

Journal Article

Effects of linker sequence modifications on the structure, stability and biological activity of a cyclic α-conotoxin

Carstens, Bodil B., Swedberg, Joakim, Berecki, Geza, Adams, David J., Craik, David J. and Clark, Richard J. (2016). Effects of linker sequence modifications on the structure, stability and biological activity of a cyclic α-conotoxin. Biopolymers, 106 (6), 864-875. doi: 10.1002/bip.22848

Effects of linker sequence modifications on the structure, stability and biological activity of a cyclic α-conotoxin

2016

Journal Article

Unveiling the diversity of cyclotides by combining peptidome and transcriptome analysis

Koehbach, Johannes and Clark, Richard J. (2016). Unveiling the diversity of cyclotides by combining peptidome and transcriptome analysis. Biopolymers, 106 (6), 774-783. doi: 10.1002/bip.22858

Unveiling the diversity of cyclotides by combining peptidome and transcriptome analysis

2016

Journal Article

Release of bioactive peptides from polyurethane films in vitro and in vivo: Effect of polymer composition

Zhang, Jing, Woodruff, Trent M., Clark, Richard J., Martin, Darren J. and Minchin, Rodney F. (2016). Release of bioactive peptides from polyurethane films in vitro and in vivo: Effect of polymer composition. Acta Biomaterialia, 41, 264-272. doi: 10.1016/j.actbio.2016.05.034

Release of bioactive peptides from polyurethane films in vitro and in vivo: Effect of polymer composition

2016

Journal Article

Discovery of functionally selective C5aR2 ligands: novel modulators of C5a signalling

Croker, Daniel E., Monk, Peter N., Halai, Reena, Kaeslin, Geraldine, Schofield, Zoe, Wu, Mike C. L., Clark, Richard J., Blaskovich, Mark A. T., Morikis, Dimitrios, Floudas, Christodoulos A., Cooper, Matthew and Woodruff, Trent M. (2016). Discovery of functionally selective C5aR2 ligands: novel modulators of C5a signalling. Immunology and Cell Biology, 94 (8), 787-795. doi: 10.1038/icb.2016.43

Discovery of functionally selective C5aR2 ligands: novel modulators of C5a signalling

2016

Journal Article

The N-terminal pro-domain of the kalata B1 cyclotide precursor is intrinsically unstructured

Daly, Norelle L., Gunasekera, Sunithi, Clark, Richard J., Lin, Feng, Wade, John D., Anderson, Marilyn and Craik, David J. (2016). The N-terminal pro-domain of the kalata B1 cyclotide precursor is intrinsically unstructured. Biopolymers, 106 (6), 825-833. doi: 10.1002/bip.22977

The N-terminal pro-domain of the kalata B1 cyclotide precursor is intrinsically unstructured

2016

Journal Article

Tick holocyclotoxins trigger host paralysis by presynaptic inhibition

Chand, Kirat K., Lee, Kah Meng, Lavidis, Nickolas A., Rodriguez-Valle, Manuel, Ijaz, Hina, Koehbach, Johannes, Clark, Richard J., Lew-Tabor, Ala and Noakes, Peter G. (2016). Tick holocyclotoxins trigger host paralysis by presynaptic inhibition. Scientific Reports, 6 (1) 29446, 29446. doi: 10.1038/srep29446

Tick holocyclotoxins trigger host paralysis by presynaptic inhibition

2016

Journal Article

Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High-Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif

Carstens, Bodil B., Berecki, Géza, Daniel, James T., Lee, Han Siean, Jackson, Kathryn A. V., Tae, Han-Shen, Sadeghi, Mahsa, Castro, Joel, O'Donnell, Tracy, Deiteren, Annemie, Brierley, Stuart M., Craik, David J., Adams, David J. and Clark, Richard J. (2016). Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High-Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif. Angewandte Chemie, 128 (15), 4770-4774. doi: 10.1002/ange.201600297

Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High-Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif

2016

Conference Publication

Pharmacological Characterisation of the Cyclotide Kalata B7 At Insect Orthologues of the Oxytocin/vasopressin Receptors

Keov, P., Liutkeviciute, Z., Clark, R. and Gruber, C. (2016). Pharmacological Characterisation of the Cyclotide Kalata B7 At Insect Orthologues of the Oxytocin/vasopressin Receptors. HOBOKEN: WILEY.

Pharmacological Characterisation of the Cyclotide Kalata B7 At Insect Orthologues of the Oxytocin/vasopressin Receptors

2016

Journal Article

Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif

Carstens, Bodil B., Berecki, Geza, Daniel, James T., Lee, Han Siean, Jackson, Kathryn A. V., Tae, Han-Shen, Sadeghi, Mahsa, Castro, Joel, O'Donnell, Tracy, Deiteren, Annemie, Brierley, Stuart M., Craik, David J., Adams, David J. and Clark, Richard J. (2016). Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif. Angewandte Chemie - International Edition, 55 (15), 4692-4696. doi: 10.1002/anie.201600297

Structure-Activity Studies of Cysteine-Rich α-Conotoxins that Inhibit High Voltage-Activated Calcium Channels via GABAB Receptor Activation Reveal a Minimal Functional Motif

2016

Conference Publication

Development of peptide therapeutics for iron disorders

Goncalves, Daniela, Rishi, Gautam, Aliyanto, Randy, Rosengren, Johan, Subramaniam, Nathan, Frazer, David and Clark, Richard (2016). Development of peptide therapeutics for iron disorders. 6th Meeting of the International BioIron Society, Zhejiang University, Hangzhou, China, 8-10 September 2015. Hoboken, NJ, United States: John Wiley & Sons.

Development of peptide therapeutics for iron disorders

Funding

Current funding

  • 2024 - 2027
    Preclinical development of complement C5a receptor 2 modulators for motor neuron disease
    Cure for MND Foundation - Drug Development Grants
    Open grant
  • 2022 - 2025
    Making peptides orally bioavailable
    ARC Discovery Projects
    Open grant
  • 2022 - 2025
    Making peptide drugs orally bioavailable
    NHMRC IDEAS Grants
    Open grant
  • 2022 - 2025
    Novel long-acting and orally delivered conotoxin-based peptides with both analgesic efficacy and disease modifying potential
    NHMRC Development Grant
    Open grant

Past funding

  • 2022 - 2024
    Developing novel acid-sensing ion channel inhibitors as neuroprotective leads and diagnostic agents for multiple sclerosis
    Multiple Sclerosis Research Australia - Targeted Grant - Neurodegeneration
    Open grant
  • 2021 - 2023
    Complement C5aR1: A novel therapeutic target for brain cancer
    Brain Cancer Innovation Project Grants
    Open grant
  • 2020 - 2022
    Neuroprotective role of novel acid-sensing ion channel inhibitor in Multiple sclerosis (MS) disease
    Multiple Sclerosis Research Australia
    Open grant
  • 2020 - 2024
    Preclinical development of centrally active complement C3a receptor modulators as disease-modifying drugs for motor neuron disease
    Cure for MND Foundation - Drug Development Grants
    Open grant
  • 2019
    A versatile accurate mass, high resolution QTOF mass spectrometer for chemistry and proteomic applications
    UQ Major Equipment and Infrastructure
    Open grant
  • 2019
    Chemical Purification Network
    UQ Major Equipment and Infrastructure
    Open grant
  • 2018
    Multichannel peptide synthesiser to accelerate UQ's biodiscovery pipeline and peptide drug development programs
    UQ Major Equipment and Infrastructure
    Open grant
  • 2017 - 2018
    A Pharmacology Screening Facility to Accelerate Drug Discovery and Development
    UQ Major Equipment and Infrastructure
    Open grant
  • 2017 - 2019
    Hormone transplant by alpha-2-macroglubulin: Novel roles in regulating hormone activity (NHMRC Project Grant led by the University of Sydney)
    University of Sydney
    Open grant
  • 2017 - 2021
    Preclinical Development of Complement C5aR Antagonists for the Treatment of Motor Neuron Disease
    NHMRC Development Grant
    Open grant
  • 2016 - 2017
    Development of complement C5aR1 antagonists for the treatment of motor neuron disease
    UQ Collaboration and Industry Engagement Fund - FirstLink
    Open grant
  • 2016
    Integrative blood coagulation research core facility
    UQ Major Equipment and Infrastructure
    Open grant
  • 2016
    Patch-clamp electrophysiology platform for drug and insecticide discovery
    UQ Major Equipment and Infrastructure
    Open grant
  • 2014 - 2016
    Better treatments for chronic pain
    NHMRC Development Grant
    Open grant
  • 2012 - 2015
    Elucidating the mechanisms of alpha-conotoxin-induced calcium channel inhibition via G protein-coupled receptors (NHMRC project grant administered by Royal Melbourne Institute of Technology)
    Royal Melbourne Institute of Technology University
    Open grant
  • 2011 - 2012
    Elucidating the neuroprotective properties of alpha-conotoxins
    UQ New Staff Research Start-Up Fund
    Open grant
  • 2011 - 2015
    Development of effective peptide-based drugs
    ARC Future Fellowships
    Open grant
  • 2011
    A Multi-Channel Fluorescence Plate Reader for Studying Receptor-Ligand Interactions
    NHMRC Equipment Grant
    Open grant
  • 2011
    Building UQ's analytical capacity in biomedical sciences
    UQ Major Equipment and Infrastructure
    Open grant
  • 2011 - 2014
    Understanding the structure/function relationships of the iron regulatory peptide hepcidin
    NHMRC Project Grant
    Open grant
  • 2010 - 2012
    A new G-protein coupled receptor target for conotoxins
    ARC Discovery Projects
    Open grant
  • 2010 - 2012
    New peptide-based drugs for the treatment of neuropathic pain
    NHMRC Project Grant
    Open grant
  • 2010
    The development of peptides (mini-proteins) as drugs: improved purification capability
    UQ Major Equipment and Infrastructure
    Open grant
  • 2009 - 2021
    Cone Shell snail venom research
    The Simon Axelsen Memorial Fund
    Open grant
  • 2008 - 2011
    NHMRC Career Development Award (Biomedical - Level 1): Development of effective peptide-based drugs
    NHMRC Career Development Award
    Open grant
  • 2008 - 2010
    Development of a novel orally active peptide for the treatment of pain
    NHMRC Development Grant
    Open grant
  • 2008 - 2010
    Discovery of novel cyclotides.
    Department of Innovation, Industry, Science and Research
    Open grant
  • 2007
    Exploring the therapeutic potential of a novel family of proteins
    Australian Academy of Science
    Open grant
  • 2007 - 2010
    Development of a generic strategy for the stabilisation of peptide-based therapeutics
    NHMRC Project Grant
    Open grant
  • 2007 - 2008
    Development of stable peptide-based drugs for the treatment of iron disorders
    UQ Early Career Researcher
    Open grant
  • 2007
    Molecular imprinting of circular proteins
    UQ Travel Grants Scheme
    Open grant

Supervision

Availability

Associate Professor Richard Clark is:
Available for supervision

Before you email them, read our advice on how to contact a supervisor.

Available projects

  • Designing novel conotoxins with therapeutic potential

    Conotoxins, with their exquisite specificity and potency have recently created much excitement as drug leads for the treatment of chronic pain. For example, the conotoxin MVIIA (also known as Ziconotide or Prialt) has been approved for use in the U.S. and Europe for the treatment of pain and several other conotoxins have entered clinical trials. In addition, a number of conotoxins have played a critical role in dissecting the molecular mechanisms of ion channel and transporter functions in the nervous system.

    There are projects available in the design of novel conotoxins that target specific receptors involved in pain.

  • Development of stable peptide-based drugs for the treatment of iron disorders

    Hepcidin is the principal iron-regulatory hormone and the key mediator of iron overload (haemochromatosis) and anaemia of inflammation. This research project involves two development streams of peptide design, synthesis and structure/function analysis. The first stream will focus on the specific residues important for biological activity of hepcidin and the mutation of these residues to improve activity. The second stream will involve the development of stabilised analogues of native hepcidin. The two streams will coalesce during the final round of development to produce a series of novel cyclic hepcidin drug leads.

Supervision history

Current supervision

Completed supervision

Media

Enquiries

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communications@uq.edu.au