
Overview
Background
Dr Clark is a Senior Lecturer at the School of Biomedical Sciences where he is Head of the Peptide Chemical Biology Lab. He completed his PhD in 2000 at the UQ Chemistry Department studying marine natural products chemistry and chemical ecology with Prof. Mary Garson. He then shifted his research focus towards peptide chemistry, structural biology and drug design when he was recruited to the lab of Prof. David Craik at the IMB. His current research focus is the development of technologies to stabilise peptide therapeutics and the elucidation of the structure/function activity of bioactive peptides.
Availability
- Associate Professor Richard Clark is:
- Available for supervision
Fields of research
Qualifications
- Bachelor (Honours) of Science (Advanced), University of Tasmania
- Doctor of Philosophy, The University of Queensland
Works
Search Professor Richard Clark’s works on UQ eSpace
2012
Journal Article
Engineering cyclic peptide toxins
Clark, Richard J. and Craik, David J. (2012). Engineering cyclic peptide toxins. Methods in Enzymology, 503, 57-74. doi: 10.1016/B978-0-12-396962-0.00003-3
2012
Conference Publication
Novel single-chain ligands for the relaxin-3 receptor RXFP3
Rosengren, K. J., Haugaard-Kedstroem, L. M., Jones, M., Clark, R. J. and Bathgate, R. A. D. (2012). Novel single-chain ligands for the relaxin-3 receptor RXFP3. 32nd European Peptide Symposium "Peptides 2012", Athens, Greece, 02-07 September 2012. West Sussex, United Kingdom: John Wiley and Sons. doi: 10.1002/psc.2448
2011
Journal Article
Engineering of conotoxins for the treatment of pain
Carstens, Bodil B., Clark, Richard J., Daly, Norelle L., Harvey, Peta J., Kaas, Quentin and Craik, David J. (2011). Engineering of conotoxins for the treatment of pain. Current Pharmaceutical Design, 17 (38), 4242-4253. doi: 10.2174/138161211798999401
2011
Journal Article
Engineering pro-angiogenic peptides using stable disulfide-rich cyclic scaffolds
Chan, Lai Y., Gunasekera, Sunithi, Henriques, Sonia T., Worth, Natalie F., Le, Sarah-Jane, Clark, Richard J., Campbell, Julie H., Craik, David J. and Daly, Norelle L. (2011). Engineering pro-angiogenic peptides using stable disulfide-rich cyclic scaffolds. Blood, 118 (25), 6709-6717. doi: 10.1182/blood-2011-06-359141
2011
Journal Article
Effects of cyclization on stability, structure, and activity of alpha-conotoxin RgIA at the alpha 9 alpha 10 nicotinic acetylcholine receptor and GABA(B) receptor
Halai, Reena, Callaghan, Brid, Daly, Norelle L., Clark, Richard J., Adams, David J. and Craik, David J. (2011). Effects of cyclization on stability, structure, and activity of alpha-conotoxin RgIA at the alpha 9 alpha 10 nicotinic acetylcholine receptor and GABA(B) receptor. Journal of Medicinal Chemistry, 54 (19), 6984-6992. doi: 10.1021/jm201060r
2011
Journal Article
The role of conserved Glu residue on cyclotide stability and activity: A structural and functional study of kalata B12, a naturally occurring Glu to Asp mutant
Wang, Conan K. L., Clark, Richard J., Harvey, Peta J., Rosengren, K. Johan, Cemazar, Masa and Craik, David J. (2011). The role of conserved Glu residue on cyclotide stability and activity: A structural and functional study of kalata B12, a naturally occurring Glu to Asp mutant. Biochemistry, 50 (19), 4077-4086. doi: 10.1021/bi2004153
2011
Journal Article
Design, synthesis, and characterization of a single-chain peptide antagonist for the relaxin-3 receptor RXFP3
Haugaard-Kedström, Linda M., Shabanpoor, Fazel, Hossain, Mohammed Akhter, Clark, Richard J., Ryan, Philip J., Craik, David J., Gundlach, Andrew L., Wade, John D., Bathgate, Ross A. D. and Rosengren, K. Johan (2011). Design, synthesis, and characterization of a single-chain peptide antagonist for the relaxin-3 receptor RXFP3. Journal of the American Chemical Society, 133 (13), 4965-4974. doi: 10.1021/ja110567j
2011
Journal Article
Understanding the structure/activity relationships of the iron regulatory peptide hepcidin
Clark, Richard J., Tan, Chia Chia, Preza, Gloria C., Nemeth, Elizabeta, Ganz, Tomas and Craik, David J. (2011). Understanding the structure/activity relationships of the iron regulatory peptide hepcidin. Chemistry and Biology, 18 (3), 336-343. doi: 10.1016/j.chembiol.2010.12.009
2011
Journal Article
Structure and activity of alpha-conotoxin PeIA at nicotinic acetylcholine receptor subtypes and GABA(B) receptor-coupled N-type calcium channels
Daly, Norelle L., Callaghan, Brid, Clark, Richard J., Nevin, Simon T., Adams, David J. and Craik, David J. (2011). Structure and activity of alpha-conotoxin PeIA at nicotinic acetylcholine receptor subtypes and GABA(B) receptor-coupled N-type calcium channels. Journal of Biological Chemistry, 286 (12), 10233-10237. doi: 10.1074/jbc.M110.196170
2011
Journal Article
Chemical re-engineering of chlorotoxin improves bioconjugation properties for tumor imaging and targeted therapy
Akcan, M, Stroud, MR, Hansen, SJ, Clark, RJ, Daly, NL, Craik, DJ and Olson, JM (2011). Chemical re-engineering of chlorotoxin improves bioconjugation properties for tumor imaging and targeted therapy. Journal of Medicinal Chemistry, 54 (3), 782-787. doi: 10.1021/jm101018r
2011
Conference Publication
Scanning mutagenesis of alpha-conotoxin AuIB reveals a critical residue for activity at the alpha-3-beta-4 nicotinic acetylcholine receptor
Adams, D. J., Grishin, A. A., Hung, A., Clark, R. J., Akondi, K., Alewood, P. F. and Craik, D. J. (2011). Scanning mutagenesis of alpha-conotoxin AuIB reveals a critical residue for activity at the alpha-3-beta-4 nicotinic acetylcholine receptor. nAChR2011: Nicotinic Acetylcholine Receptors as Therapeutic Targets: Emerging Frontiers in Basic Research & Clinical Science, Washington, DC, U.S.A., 9-11 November 2011. Philadelphia, PA, U.S.A.: Elsevier. doi: 10.1016/j.bcp.2011.07.017
2011
Journal Article
Interlocking Disulfides in Circular Proteins: Toward Efficient Oxidative Folding of Cyclotides
Aboye, Teshome Leta, Clark, Richard J., Burman, Robert, Roig, Marta Bajona, Craik, David J. and Goransson, Ulf (2011). Interlocking Disulfides in Circular Proteins: Toward Efficient Oxidative Folding of Cyclotides. Antioxidants & Redox Signaling, 14 (1), 77-86. doi: 10.1089/ars.2010.3112
2011
Journal Article
Stabilization of α-conotoxin AuIB: Influences of disulfide connectivity and backbone cyclization
Lovelace, Erica S., Gunasekera, Sunithi, Alvarmo, Charlotta, Clark, Richard J., Nevin, Simon T., Grishin, Anton A., Adams, David J., Craik, David J. and Daly, Norelle L. (2011). Stabilization of α-conotoxin AuIB: Influences of disulfide connectivity and backbone cyclization. Antioxidants and Redox Signaling, 14 (1), 87-95. doi: 10.1089/ars.2009.3068
2010
Journal Article
Structural and functional analysis of human liver-expressed antimicrobial peptide 2
Henriques, Sonia Troeira, Tan, Chia Chia, Craik, David J. and Clark, Richard J. (2010). Structural and functional analysis of human liver-expressed antimicrobial peptide 2. ChemBioChem, 11 (15), 2148-2157. doi: 10.1002/cbic.201000400
2010
Journal Article
Isolation, sequencing, and structure - Activity relationships of cyclotides
Ireland, David C., Clark, Richard J., Daly, Norelle L. and Craik, David J. (2010). Isolation, sequencing, and structure - Activity relationships of cyclotides. Journal of Natural Products, 73 (9), 1610-1622. doi: 10.1021/np1000413
2010
Journal Article
ChemInform Abstract: Native Chemical Ligation Applied to the Synthesis and Bioengineering of Circular Peptides and Proteins
Clark, Richard J. and Craik, David J. (2010). ChemInform Abstract: Native Chemical Ligation Applied to the Synthesis and Bioengineering of Circular Peptides and Proteins. ChemInform, 41 (41). doi: 10.1002/chin.201041266
2010
Journal Article
The engineering of an orally active conotoxin for the treatment of neuropathic pain
Clark, Richard J., Jensen, Jonas, Nevin, Simon T., Callaghan, Brid P., Adams, David J. and Craik, David J. (2010). The engineering of an orally active conotoxin for the treatment of neuropathic pain. Angewandte Chemie (International Edition), 49 (37), 6545-6548. doi: 10.1002/anie.201000620
2010
Journal Article
Lysine-scanning mutagenesis reveals an amendable face of the cyclotide kalata B1 for the optimization of nematocidal activity
Huang, Yen-Hua (黃彥華), Colgrave, Michelle L., Clark, Richard J., Kotze, Andrew C. and Craik, David J. (2010). Lysine-scanning mutagenesis reveals an amendable face of the cyclotide kalata B1 for the optimization of nematocidal activity. Journal of Biological Chemistry, 285 (14), 10797-10805. doi: 10.1074/jbc.M109.089854
2010
Conference Publication
Evaluation of toxicity and antitumor activity of cycloviolacin O2 in mice
Burman, Robert, Svedlund, Erika, Felth, Jenny, Hassan, Saadia, Hermann, Anders, Clark, Richard James, Craik, David J., Bohlin, Lars, Claeson, Per, Goransson, Ulf and Gullbo, Joachim (2010). Evaluation of toxicity and antitumor activity of cycloviolacin O2 in mice. 1st International Conference on Circular Proteins, Heron Island, Qld, Australia, 18-21 October, 2009. Hoboken, NJ, U.S.A: Wiley Interscience. doi: 10.1002/bip.21408
2010
Conference Publication
Sunflower trypsin inhibitor-1, proteolytic studies on a trypsin inhibitor peptide and its analogs
Colgrave, Michelle, Korsinczky, Michael Laszlo Jonas, Clark, Richard James, Foley, Fiona and Craik, David J. (2010). Sunflower trypsin inhibitor-1, proteolytic studies on a trypsin inhibitor peptide and its analogs. 1st International Conference on Circular Proteins, Heron Island, Qld, Australia, 18-21 October 2009. Hoboken, N.J., U.S.: John Wiley & Sons. doi: 10.1002/bip.21415
Funding
Current funding
Past funding
Supervision
Availability
- Associate Professor Richard Clark is:
- Available for supervision
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Available projects
-
Designing novel conotoxins with therapeutic potential
Conotoxins, with their exquisite specificity and potency have recently created much excitement as drug leads for the treatment of chronic pain. For example, the conotoxin MVIIA (also known as Ziconotide or Prialt) has been approved for use in the U.S. and Europe for the treatment of pain and several other conotoxins have entered clinical trials. In addition, a number of conotoxins have played a critical role in dissecting the molecular mechanisms of ion channel and transporter functions in the nervous system.
There are projects available in the design of novel conotoxins that target specific receptors involved in pain.
-
Development of stable peptide-based drugs for the treatment of iron disorders
Hepcidin is the principal iron-regulatory hormone and the key mediator of iron overload (haemochromatosis) and anaemia of inflammation. This research project involves two development streams of peptide design, synthesis and structure/function analysis. The first stream will focus on the specific residues important for biological activity of hepcidin and the mutation of these residues to improve activity. The second stream will involve the development of stabilised analogues of native hepcidin. The two streams will coalesce during the final round of development to produce a series of novel cyclic hepcidin drug leads.
Supervision history
Current supervision
-
Doctor Philosophy
Design and development of peptide ligands targeting the complement system
Principal Advisor
Other advisors: Professor Trent Woodruff
-
Doctor Philosophy
Making peptide drugs orally bioavailable
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
Doctor Philosophy
Preclinical evaluation of complement receptor targeted drugs for neurological disease
Associate Advisor
Other advisors: Dr John Lee, Dr Vinod Kumar, Professor Trent Woodruff
-
Doctor Philosophy
Novel long-acting and orally delivered conotoxin-based peptides with both analgesic efficacy and disease modifying potential
Associate Advisor
Other advisors: Dr Andy Kuo, Emeritus Professor Maree Smith
Completed supervision
-
2022
Doctor Philosophy
Design and Development of Peptides Targeting the C5a-C5aR Interaction
Principal Advisor
Other advisors: Professor Trent Woodruff, Associate Professor Johan Rosengren
-
2020
Doctor Philosophy
Development of miniaturised alpha-conotoxins for the treatment of pain
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
2019
Doctor Philosophy
Mining helminth secretions for new classes of immune suppressing drugs
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
2018
Doctor Philosophy
Development of Peptide Therapeutics for Iron Disorders
Principal Advisor
Other advisors: Associate Professor Johan Rosengren
-
2014
Doctor Philosophy
Marine natural wonders and the beginning of their journey towards the pharmaceutical market
Principal Advisor
Other advisors: Professor David Craik
-
2024
Master Philosophy
The Structural and Functional Role of Post-translational Modification in the µ-Conotoxins
Associate Advisor
Other advisors: Dr Anne Conibear, Associate Professor Johan Rosengren
-
2024
Doctor Philosophy
A novel cyclic peptide scaffold for drug design applications
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2022
Doctor Philosophy
Structural Studies of Peptides Buried within Seed Storage Proteins
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2022
Doctor Philosophy
Preclinical development of complement C5aR1 antagonists for the treatment of inflammatory bowel disease
Associate Advisor
Other advisors: Dr John Lee, Dr Vinod Kumar, Dr Felicity Han, Professor Trent Woodruff
-
2021
Doctor Philosophy
Investigating the Immunopharmacology of the Complement C5a Receptors, C5aR1 and C5aR2
Associate Advisor
Other advisors: Dr John Lee, Professor Mark Blaskovich, Professor Trent Woodruff
-
2020
Doctor Philosophy
Targeting of relaxin-3 analogues to the brain for pharmacological modulation of neurosignalling
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2019
Doctor Philosophy
Expanding the Structural Atlas of Peptide Toxins
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2017
Doctor Philosophy
Structural insights into cyclic plant peptides and their albumin precursors
Associate Advisor
Other advisors: Associate Professor Johan Rosengren
-
2015
Doctor Philosophy
The Science and Business of Novel Therapeutics: The Need for a Complete Picture
Associate Advisor
Other advisors: Professor Damian Hine, Professor David Craik
-
2012
Doctor Philosophy
PEPLINK: A Fragment-Based Method for Screening Peptides as Drug Leads
Associate Advisor
Other advisors: Professor David Craik
-
2011
Doctor Philosophy
Design and discovery of cyclic peptides with applications in drug development
Associate Advisor
Other advisors: Professor David Craik
-
2010
Doctor Philosophy
The story of a-conotoxins, Vc1.1 and RgIA, on their journey to becoming therapeutics
Associate Advisor
Other advisors: Professor David Craik
Media
Enquiries
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